Protein–RNA interactions for Protein: Q9N2J8

HERV-H_2q24.1 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2J8 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.93□□□□□ -2.1
Q9N2J8 RN7SKP192-201ENST00000411291 327 ntBASIC1.93□□□□□ -2.1
Q9N2J8 AC245047.4-201ENST00000433189 144 ntBASIC1.93□□□□□ -2.1
Q9N2J8 AC025033.1-201ENST00000463883 194 ntBASIC1.93□□□□□ -2.1
Q9N2J8 TRBV12-1-201ENST00000479785 344 ntBASIC1.93□□□□□ -2.1
Q9N2J8 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.93□□□□□ -2.1
Q9N2J8 RNU6-1023P-201ENST00000516137 106 ntBASIC1.93□□□□□ -2.1
Q9N2J8 RNU7-116P-201ENST00000516940 62 ntBASIC1.93□□□□□ -2.1
Q9N2J8 RNU6-1271P-201ENST00000517049 105 ntBASIC1.93□□□□□ -2.1
Q9N2J8 SUB1P4-201ENST00000566062 339 ntBASIC1.93□□□□□ -2.1
Q9N2J8 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.93□□□□□ -2.1
Q9N2J8 MIR6079-201ENST00000635807 62 ntBASIC1.93□□□□□ -2.1
Q9N2J8 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
Q9N2J8 AC008555.8-201ENST00000623602 2168 ntBASIC1.93□□□□□ -2.1
Q9N2J8 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
Q9N2J8 Y_RNA.20-201ENST00000362479 113 ntBASIC1.92□□□□□ -2.1
Q9N2J8 SNORD27-201ENST00000363981 72 ntBASIC1.92□□□□□ -2.1
Q9N2J8 SNORA20.1-201ENST00000364790 130 ntBASIC1.92□□□□□ -2.1
Q9N2J8 RNU6-136P-201ENST00000384663 107 ntBASIC1.92□□□□□ -2.1
Q9N2J8 MIR17-201ENST00000385012 84 ntBASIC1.92□□□□□ -2.1
Q9N2J8 RNU6-763P-201ENST00000390865 106 ntBASIC1.92□□□□□ -2.1
Q9N2J8 RN7SKP223-201ENST00000410582 62 ntBASIC1.92□□□□□ -2.1
Q9N2J8 BTF3P11-201ENST00000426582 477 ntBASIC1.92□□□□□ -2.1
Q9N2J8 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.92□□□□□ -2.1
Q9N2J8 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.92□□□□□ -2.1
Q9N2J8 Y_RNA.673-201ENST00000516306 88 ntBASIC1.92□□□□□ -2.1
Q9N2J8 RNU1-40P-201ENST00000516816 164 ntBASIC1.92□□□□□ -2.1
Q9N2J8 RNU1-97P-201ENST00000516872 164 ntBASIC1.92□□□□□ -2.1
Q9N2J8 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.92□□□□□ -2.1
Q9N2J8 AC110588.1-201ENST00000559699 137 ntBASIC1.92□□□□□ -2.1
Q9N2J8 MIR4287-201ENST00000579398 78 ntBASIC1.92□□□□□ -2.1
Q9N2J8 AC010900.2-201ENST00000604508 210 ntBASIC1.92□□□□□ -2.1
Q9N2J8 MIR219B-201ENST00000637023 88 ntBASIC1.92□□□□□ -2.1
Q9N2J8 ZNF702P-202ENST00000434269 1966 ntBASIC1.92□□□□□ -2.1
Q9N2J8 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
Q9N2J8 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
Q9N2J8 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Q9N2J8 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Q9N2J8 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Q9N2J8 Y_RNA.60-201ENST00000362831 98 ntBASIC1.91□□□□□ -2.1
Q9N2J8 Y_RNA.82-201ENST00000363000 102 ntBASIC1.91□□□□□ -2.1
Q9N2J8 Y_RNA.92-201ENST00000363043 102 ntBASIC1.91□□□□□ -2.1
Q9N2J8 Y_RNA.235-201ENST00000364412 102 ntBASIC1.91□□□□□ -2.1
Q9N2J8 SNORA16B-201ENST00000364674 135 ntBASIC1.91□□□□□ -2.1
Q9N2J8 Y_RNA.277-201ENST00000364754 102 ntBASIC1.91□□□□□ -2.1
Q9N2J8 Y_RNA.306-201ENST00000365015 102 ntBASIC1.91□□□□□ -2.1
Q9N2J8 Y_RNA.312-201ENST00000365089 102 ntBASIC1.91□□□□□ -2.1
Q9N2J8 Y_RNA.322-201ENST00000365151 102 ntBASIC1.91□□□□□ -2.1
Q9N2J8 MIR520A-201ENST00000384862 85 ntBASIC1.91□□□□□ -2.1
Q9N2J8 SNORA26.5-201ENST00000391215 123 ntBASIC1.91□□□□□ -2.1
Q9N2J8 Y_RNA.590-201ENST00000410140 107 ntBASIC1.91□□□□□ -2.1
Q9N2J8 AL158823.1-201ENST00000418441 478 ntBASIC1.91□□□□□ -2.1
Q9N2J8 AC104332.1-201ENST00000440471 797 ntBASIC1.91□□□□□ -2.1
Q9N2J8 AL021397.1-201ENST00000451806 248 ntBASIC1.91□□□□□ -2.1
Q9N2J8 Y_RNA.650-201ENST00000459002 102 ntBASIC1.91□□□□□ -2.1
Q9N2J8 AC091021.1-201ENST00000468051 388 ntBASIC1.91□□□□□ -2.1
Q9N2J8 RPS27P21-201ENST00000486977 252 ntBASIC1.91□□□□□ -2.1
Q9N2J8 MTND1P19-201ENST00000511780 315 ntBASIC1.91□□□□□ -2.1
Q9N2J8 Y_RNA.680-201ENST00000516441 93 ntBASIC1.91□□□□□ -2.1
Q9N2J8 Y_RNA.777-201ENST00000516982 102 ntBASIC1.91□□□□□ -2.1
Q9N2J8 RNU6-1096P-201ENST00000517089 102 ntBASIC1.91□□□□□ -2.1
Q9N2J8 MIR5002-201ENST00000584713 97 ntBASIC1.91□□□□□ -2.1
Q9N2J8 Y_RNA.771-201ENST00000598668 102 ntBASIC1.91□□□□□ -2.1
Q9N2J8 MIR548AY-201ENST00000617669 107 ntBASIC1.91□□□□□ -2.1
Q9N2J8 Y_RNA.789-201ENST00000622480 102 ntBASIC1.91□□□□□ -2.1
Q9N2J8 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.91□□□□□ -2.1
Q9N2J8 RNA5SP276-201ENST00000362580 94 ntBASIC1.9□□□□□ -2.11
Q9N2J8 Y_RNA.117-201ENST00000363294 101 ntBASIC1.9□□□□□ -2.11
Q9N2J8 RNU6-112P-201ENST00000363599 104 ntBASIC1.9□□□□□ -2.11
Q9N2J8 RNU6-899P-201ENST00000363947 107 ntBASIC1.9□□□□□ -2.11
Q9N2J8 SNORA63D-201ENST00000364359 132 ntBASIC1.9□□□□□ -2.11
Q9N2J8 RNU4-52P-201ENST00000384209 138 ntBASIC1.9□□□□□ -2.11
Q9N2J8 Y_RNA.476-201ENST00000384347 108 ntBASIC1.9□□□□□ -2.11
Q9N2J8 SNORA64-201ENST00000384674 134 ntBASIC1.9□□□□□ -2.11
Q9N2J8 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Q9N2J8 AL512604.1-201ENST00000404812 257 ntBASIC1.9□□□□□ -2.11
Q9N2J8 RNU7-141P-201ENST00000459304 62 ntBASIC1.9□□□□□ -2.11
Q9N2J8 Y_RNA.637-201ENST00000459424 114 ntBASIC1.9□□□□□ -2.11
Q9N2J8 Y_RNA.679-201ENST00000516416 91 ntBASIC1.9□□□□□ -2.11
Q9N2J8 MIR514B-201ENST00000516774 80 ntBASIC1.9□□□□□ -2.11
Q9N2J8 RNU6-341P-201ENST00000516973 96 ntBASIC1.9□□□□□ -2.11
Q9N2J8 AC091178.2-201ENST00000584401 117 ntBASIC1.9□□□□□ -2.11
Q9N2J8 AC002984.1-201ENST00000591692 448 ntBASIC1.9□□□□□ -2.11
Q9N2J8 POLR3GP1-201ENST00000594073 261 ntBASIC1.9□□□□□ -2.11
Q9N2J8 AP003357.1-201ENST00000604497 148 ntBASIC1.9□□□□□ -2.11
Q9N2J8 snoU18.1-201ENST00000629629 71 ntBASIC1.9□□□□□ -2.11
Q9N2J8 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.9□□□□□ -2.11
Q9N2J8 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
Q9N2J8 RNU6-1048P-201ENST00000364054 107 ntBASIC1.89□□□□□ -2.11
Q9N2J8 SNORA72-201ENST00000384339 132 ntBASIC1.89□□□□□ -2.11
Q9N2J8 MTCO2P33-201ENST00000402100 465 ntBASIC1.89□□□□□ -2.11
Q9N2J8 RNU2-7P-201ENST00000410794 178 ntBASIC1.89□□□□□ -2.11
Q9N2J8 RNA5SP100-201ENST00000410903 110 ntBASIC1.89□□□□□ -2.11
Q9N2J8 RNA5SP59-201ENST00000410922 110 ntBASIC1.89□□□□□ -2.11
Q9N2J8 RNU2-14P-201ENST00000411053 191 ntBASIC1.89□□□□□ -2.11
Q9N2J8 AC245047.3-201ENST00000429428 127 ntBASIC1.89□□□□□ -2.11
Q9N2J8 RPS4XP11-201ENST00000446897 772 ntBASIC1.89□□□□□ -2.11
Q9N2J8 AC117454.1-201ENST00000491120 168 ntBASIC1.89□□□□□ -2.11
Q9N2J8 RNU7-115P-201ENST00000516433 55 ntBASIC1.89□□□□□ -2.11
Q9N2J8 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 334.7 ms