Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
PCDH18Q9HCL0 RNU1-22P-201ENST00000363334 158 ntBASIC2.77□□□□□ -1.97
PCDH18Q9HCL0 Y_RNA.432-201ENST00000384087 111 ntBASIC2.77□□□□□ -1.97
PCDH18Q9HCL0 RNY3P5-201ENST00000384127 102 ntBASIC2.77□□□□□ -1.97
PCDH18Q9HCL0 RNU6-1186P-201ENST00000410429 97 ntBASIC2.77□□□□□ -1.97
PCDH18Q9HCL0 RNU4-43P-201ENST00000410628 137 ntBASIC2.77□□□□□ -1.97
PCDH18Q9HCL0 RN7SKP101-201ENST00000411376 320 ntBASIC2.77□□□□□ -1.97
PCDH18Q9HCL0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.77□□□□□ -1.97
PCDH18Q9HCL0 AC107083.1-201ENST00000439643 279 ntBASIC2.77□□□□□ -1.97
PCDH18Q9HCL0 AL161788.1-201ENST00000441805 169 ntBASIC2.77□□□□□ -1.97
PCDH18Q9HCL0 AC025750.2-201ENST00000442609 450 ntBASIC2.77□□□□□ -1.97
PCDH18Q9HCL0 RNU6-1299P-201ENST00000516316 100 ntBASIC2.77□□□□□ -1.97
PCDH18Q9HCL0 MIR4446-201ENST00000578505 67 ntBASIC2.77□□□□□ -1.97
PCDH18Q9HCL0 MIR4635-201ENST00000583759 79 ntBASIC2.77□□□□□ -1.97
PCDH18Q9HCL0 AC005000.2-201ENST00000605468 310 ntBASIC2.77□□□□□ -1.97
PCDH18Q9HCL0 U7.2-201ENST00000607576 63 ntBASIC2.77□□□□□ -1.97
PCDH18Q9HCL0 MIR6129-201ENST00000616087 109 ntBASIC2.77□□□□□ -1.97
PCDH18Q9HCL0 AC080128.1-201ENST00000474389 1917 ntBASIC2.77□□□□□ -1.97
PCDH18Q9HCL0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PCDH18Q9HCL0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PCDH18Q9HCL0 RNU6-674P-201ENST00000363831 107 ntBASIC2.76□□□□□ -1.97
PCDH18Q9HCL0 Y_RNA.203-201ENST00000364106 102 ntBASIC2.76□□□□□ -1.97
PCDH18Q9HCL0 SNORD21-201ENST00000383953 95 ntBASIC2.76□□□□□ -1.97
PCDH18Q9HCL0 RNU6-484P-201ENST00000384016 107 ntBASIC2.76□□□□□ -1.97
PCDH18Q9HCL0 SNORA72-201ENST00000384339 132 ntBASIC2.76□□□□□ -1.97
PCDH18Q9HCL0 RNU6-429P-201ENST00000384582 108 ntBASIC2.76□□□□□ -1.97
PCDH18Q9HCL0 SNORA11.1-201ENST00000408133 129 ntBASIC2.76□□□□□ -1.97
PCDH18Q9HCL0 MIR1253-201ENST00000408273 105 ntBASIC2.76□□□□□ -1.97
PCDH18Q9HCL0 RNU2-70P-201ENST00000410718 179 ntBASIC2.76□□□□□ -1.97
PCDH18Q9HCL0 AC008134.1-201ENST00000420943 193 ntBASIC2.76□□□□□ -1.97
PCDH18Q9HCL0 RPL23AP83-201ENST00000434984 473 ntBASIC2.76□□□□□ -1.97
PCDH18Q9HCL0 HMGN2P34-201ENST00000437647 269 ntBASIC2.76□□□□□ -1.97
PCDH18Q9HCL0 AC105272.1-201ENST00000438604 198 ntBASIC2.76□□□□□ -1.97
PCDH18Q9HCL0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.76□□□□□ -1.97
PCDH18Q9HCL0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.76□□□□□ -1.97
PCDH18Q9HCL0 RN7SKP132-201ENST00000516001 208 ntBASIC2.76□□□□□ -1.97
PCDH18Q9HCL0 RNU6-197P-201ENST00000516680 100 ntBASIC2.76□□□□□ -1.97
PCDH18Q9HCL0 SCARNA11.3-201ENST00000517276 130 ntBASIC2.76□□□□□ -1.97
PCDH18Q9HCL0 AC011604.1-201ENST00000545978 196 ntBASIC2.76□□□□□ -1.97
PCDH18Q9HCL0 MIR5194-201ENST00000582634 120 ntBASIC2.76□□□□□ -1.97
PCDH18Q9HCL0 AL033523.1-201ENST00000605153 153 ntBASIC2.76□□□□□ -1.97
PCDH18Q9HCL0 AP001340.1-201ENST00000624405 217 ntBASIC2.76□□□□□ -1.97
PCDH18Q9HCL0 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PCDH18Q9HCL0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
PCDH18Q9HCL0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PCDH18Q9HCL0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
PCDH18Q9HCL0 RNU6-1209P-201ENST00000363655 107 ntBASIC2.75□□□□□ -1.97
PCDH18Q9HCL0 MIR9-1-201ENST00000385198 89 ntBASIC2.75□□□□□ -1.97
PCDH18Q9HCL0 RNA5SP496-201ENST00000391240 109 ntBASIC2.75□□□□□ -1.97
PCDH18Q9HCL0 MLLT10P1-201ENST00000418346 262 ntBASIC2.75□□□□□ -1.97
PCDH18Q9HCL0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.75□□□□□ -1.97
PCDH18Q9HCL0 RPL36AP21-201ENST00000490372 323 ntBASIC2.75□□□□□ -1.97
PCDH18Q9HCL0 AC097462.1-201ENST00000514125 324 ntBASIC2.75□□□□□ -1.97
PCDH18Q9HCL0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.75□□□□□ -1.97
PCDH18Q9HCL0 MTND5P34-201ENST00000568888 325 ntBASIC2.75□□□□□ -1.97
PCDH18Q9HCL0 AL021707.8-201ENST00000609428 183 ntBASIC2.75□□□□□ -1.97
PCDH18Q9HCL0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
PCDH18Q9HCL0 AL159152.1-201ENST00000635019 2587 ntBASIC2.74□□□□□ -1.97
PCDH18Q9HCL0 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PCDH18Q9HCL0 RNU6-978P-201ENST00000364371 103 ntBASIC2.74□□□□□ -1.97
PCDH18Q9HCL0 AC060773.1-201ENST00000421698 310 ntBASIC2.74□□□□□ -1.97
PCDH18Q9HCL0 MTCO1P44-201ENST00000441935 243 ntBASIC2.74□□□□□ -1.97
PCDH18Q9HCL0 AC233266.1-201ENST00000454518 96 ntBASIC2.74□□□□□ -1.97
PCDH18Q9HCL0 AC023141.11-201ENST00000508864 202 ntBASIC2.74□□□□□ -1.97
PCDH18Q9HCL0 RPPH1-2P-201ENST00000516688 293 ntBASIC2.74□□□□□ -1.97
PCDH18Q9HCL0 AC073413.2-201ENST00000604332 360 ntBASIC2.74□□□□□ -1.97
PCDH18Q9HCL0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.74□□□□□ -1.97
PCDH18Q9HCL0 AC242852.1-201ENST00000612151 96 ntBASIC2.74□□□□□ -1.97
PCDH18Q9HCL0 uc_338.4-201ENST00000616635 176 ntBASIC2.74□□□□□ -1.97
PCDH18Q9HCL0 AC244015.1-201ENST00000622301 99 ntBASIC2.74□□□□□ -1.97
PCDH18Q9HCL0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PCDH18Q9HCL0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PCDH18Q9HCL0 Y_RNA.796-201ENST00000364268 102 ntBASIC2.73□□□□□ -1.97
PCDH18Q9HCL0 Y_RNA.799-201ENST00000364992 102 ntBASIC2.73□□□□□ -1.97
PCDH18Q9HCL0 RNU6-597P-201ENST00000365620 102 ntBASIC2.73□□□□□ -1.97
PCDH18Q9HCL0 RNU6-1056P-201ENST00000383996 107 ntBASIC2.73□□□□□ -1.97
PCDH18Q9HCL0 MIR592-201ENST00000384959 97 ntBASIC2.73□□□□□ -1.97
PCDH18Q9HCL0 AL513477.1-202ENST00000417061 214 ntBASIC2.73□□□□□ -1.97
PCDH18Q9HCL0 AC245047.4-201ENST00000433189 144 ntBASIC2.73□□□□□ -1.97
PCDH18Q9HCL0 AC245102.2-201ENST00000448956 180 ntBASIC2.73□□□□□ -1.97
PCDH18Q9HCL0 RPS29P21-201ENST00000496272 170 ntBASIC2.73□□□□□ -1.97
PCDH18Q9HCL0 RNU6-1096P-201ENST00000517089 102 ntBASIC2.73□□□□□ -1.97
PCDH18Q9HCL0 Pinc.1-201ENST00000616452 154 ntBASIC2.73□□□□□ -1.97
PCDH18Q9HCL0 MIR5739-201ENST00000619803 80 ntBASIC2.73□□□□□ -1.97
PCDH18Q9HCL0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PCDH18Q9HCL0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PCDH18Q9HCL0 MIR340-201ENST00000362125 95 ntBASIC2.72□□□□□ -1.97
PCDH18Q9HCL0 SNORA25.7-201ENST00000364375 127 ntBASIC2.72□□□□□ -1.97
PCDH18Q9HCL0 RNU6-153P-201ENST00000364422 104 ntBASIC2.72□□□□□ -1.97
PCDH18Q9HCL0 SNORA68.1-201ENST00000364537 132 ntBASIC2.72□□□□□ -1.97
PCDH18Q9HCL0 Y_RNA.634-201ENST00000364811 113 ntBASIC2.72□□□□□ -1.97
PCDH18Q9HCL0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
PCDH18Q9HCL0 DEFA7P-201ENST00000382676 285 ntBASIC2.72□□□□□ -1.97
PCDH18Q9HCL0 RNA5SP210-201ENST00000391034 120 ntBASIC2.72□□□□□ -1.97
PCDH18Q9HCL0 Y_RNA.630-201ENST00000411370 108 ntBASIC2.72□□□□□ -1.97
PCDH18Q9HCL0 AL158823.1-201ENST00000418441 478 ntBASIC2.72□□□□□ -1.97
PCDH18Q9HCL0 SNORA4.4-201ENST00000515921 135 ntBASIC2.72□□□□□ -1.97
PCDH18Q9HCL0 SNORA31.11-201ENST00000516528 139 ntBASIC2.72□□□□□ -1.97
PCDH18Q9HCL0 RNU6-1061P-201ENST00000516530 99 ntBASIC2.72□□□□□ -1.97
PCDH18Q9HCL0 RNU6-1291P-201ENST00000516591 104 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms