Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 Y_RNA.799-201ENST00000364992 102 ntBASIC3.32□□□□□ -1.88
ZFYVE28Q9HCC9 MIR9-1-201ENST00000385198 89 ntBASIC3.32□□□□□ -1.88
ZFYVE28Q9HCC9 RPS15AP28-201ENST00000435088 386 ntBASIC3.32□□□□□ -1.88
ZFYVE28Q9HCC9 RN7SL20P-201ENST00000488827 297 ntBASIC3.32□□□□□ -1.88
ZFYVE28Q9HCC9 RNU6-126P-201ENST00000516685 103 ntBASIC3.32□□□□□ -1.88
ZFYVE28Q9HCC9 RNU6-1096P-201ENST00000517089 102 ntBASIC3.32□□□□□ -1.88
ZFYVE28Q9HCC9 NDUFA5P6-201ENST00000542110 379 ntBASIC3.32□□□□□ -1.88
ZFYVE28Q9HCC9 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.32□□□□□ -1.88
ZFYVE28Q9HCC9 JPX_2.1-201ENST00000614161 69 ntBASIC3.32□□□□□ -1.88
ZFYVE28Q9HCC9 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.32□□□□□ -1.88
ZFYVE28Q9HCC9 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
ZFYVE28Q9HCC9 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.32□□□□□ -1.88
ZFYVE28Q9HCC9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.32□□□□□ -1.88
ZFYVE28Q9HCC9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ZFYVE28Q9HCC9 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ZFYVE28Q9HCC9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
ZFYVE28Q9HCC9 RNU6-1186P-201ENST00000410429 97 ntBASIC3.31□□□□□ -1.88
ZFYVE28Q9HCC9 Y_RNA.621-201ENST00000411065 96 ntBASIC3.31□□□□□ -1.88
ZFYVE28Q9HCC9 AC244505.4-201ENST00000434905 287 ntBASIC3.31□□□□□ -1.88
ZFYVE28Q9HCC9 SSXP5-201ENST00000443473 287 ntBASIC3.31□□□□□ -1.88
ZFYVE28Q9HCC9 HMGN1P18-201ENST00000457642 277 ntBASIC3.31□□□□□ -1.88
ZFYVE28Q9HCC9 SNORD11-201ENST00000459124 84 ntBASIC3.31□□□□□ -1.88
ZFYVE28Q9HCC9 RNU6-667P-201ENST00000517186 102 ntBASIC3.31□□□□□ -1.88
ZFYVE28Q9HCC9 AC068657.1-201ENST00000520807 306 ntBASIC3.31□□□□□ -1.88
ZFYVE28Q9HCC9 Y_RNA.757-201ENST00000578934 114 ntBASIC3.31□□□□□ -1.88
ZFYVE28Q9HCC9 AC073476.4-201ENST00000628409 72 ntBASIC3.31□□□□□ -1.88
ZFYVE28Q9HCC9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.3□□□□□ -1.88
ZFYVE28Q9HCC9 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
ZFYVE28Q9HCC9 AC138915.1-201ENST00000565427 1685 ntBASIC3.3□□□□□ -1.88
ZFYVE28Q9HCC9 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
ZFYVE28Q9HCC9 MIR340-201ENST00000362125 95 ntBASIC3.3□□□□□ -1.88
ZFYVE28Q9HCC9 RNU1-96P-201ENST00000364163 162 ntBASIC3.3□□□□□ -1.88
ZFYVE28Q9HCC9 RNU6-215P-201ENST00000365169 102 ntBASIC3.3□□□□□ -1.88
ZFYVE28Q9HCC9 MIR504-201ENST00000385065 83 ntBASIC3.3□□□□□ -1.88
ZFYVE28Q9HCC9 AL513477.1-202ENST00000417061 214 ntBASIC3.3□□□□□ -1.88
ZFYVE28Q9HCC9 AC011406.1-201ENST00000512440 370 ntBASIC3.3□□□□□ -1.88
ZFYVE28Q9HCC9 RN7SKP179-201ENST00000516126 217 ntBASIC3.3□□□□□ -1.88
ZFYVE28Q9HCC9 RNU6-659P-201ENST00000516454 104 ntBASIC3.3□□□□□ -1.88
ZFYVE28Q9HCC9 SNORA64.4-201ENST00000516632 81 ntBASIC3.3□□□□□ -1.88
ZFYVE28Q9HCC9 RNA5SP380-201ENST00000517190 98 ntBASIC3.3□□□□□ -1.88
ZFYVE28Q9HCC9 MIR4662B-201ENST00000579498 81 ntBASIC3.3□□□□□ -1.88
ZFYVE28Q9HCC9 AC007229.1-201ENST00000590455 412 ntBASIC3.3□□□□□ -1.88
ZFYVE28Q9HCC9 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.3□□□□□ -1.88
ZFYVE28Q9HCC9 AC073413.2-201ENST00000604332 360 ntBASIC3.3□□□□□ -1.88
ZFYVE28Q9HCC9 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.3□□□□□ -1.88
ZFYVE28Q9HCC9 RNU6-834P-201ENST00000362367 110 ntBASIC3.29□□□□□ -1.88
ZFYVE28Q9HCC9 RNA5SP68-201ENST00000363885 119 ntBASIC3.29□□□□□ -1.88
ZFYVE28Q9HCC9 Y_RNA.634-201ENST00000364811 113 ntBASIC3.29□□□□□ -1.88
ZFYVE28Q9HCC9 RNU6-220P-201ENST00000390919 107 ntBASIC3.29□□□□□ -1.88
ZFYVE28Q9HCC9 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.29□□□□□ -1.88
ZFYVE28Q9HCC9 snoU13.26-201ENST00000459452 105 ntBASIC3.29□□□□□ -1.88
ZFYVE28Q9HCC9 OR9P1P-201ENST00000496431 281 ntBASIC3.29□□□□□ -1.88
ZFYVE28Q9HCC9 RNU7-99P-201ENST00000516271 62 ntBASIC3.29□□□□□ -1.88
ZFYVE28Q9HCC9 RNA5SP24-201ENST00000516478 95 ntBASIC3.29□□□□□ -1.88
ZFYVE28Q9HCC9 AC090049.2-201ENST00000550377 109 ntBASIC3.29□□□□□ -1.88
ZFYVE28Q9HCC9 MIR4524B-201ENST00000581569 115 ntBASIC3.29□□□□□ -1.88
ZFYVE28Q9HCC9 MIR3616-201ENST00000584070 92 ntBASIC3.29□□□□□ -1.88
ZFYVE28Q9HCC9 Pinc.1-201ENST00000616452 154 ntBASIC3.29□□□□□ -1.88
ZFYVE28Q9HCC9 AC064859.1-201ENST00000624741 174 ntBASIC3.29□□□□□ -1.88
ZFYVE28Q9HCC9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ZFYVE28Q9HCC9 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ZFYVE28Q9HCC9 MIR148B-201ENST00000362252 99 ntBASIC3.28□□□□□ -1.88
ZFYVE28Q9HCC9 snoU2-30.2-201ENST00000362805 70 ntBASIC3.28□□□□□ -1.88
ZFYVE28Q9HCC9 RNA5SP383-201ENST00000362934 120 ntBASIC3.28□□□□□ -1.88
ZFYVE28Q9HCC9 RNU6-1138P-201ENST00000365359 106 ntBASIC3.28□□□□□ -1.88
ZFYVE28Q9HCC9 RNU6-1336P-201ENST00000383886 109 ntBASIC3.28□□□□□ -1.88
ZFYVE28Q9HCC9 AL138827.1-201ENST00000402666 306 ntBASIC3.28□□□□□ -1.88
ZFYVE28Q9HCC9 AC003685.2-201ENST00000422795 395 ntBASIC3.28□□□□□ -1.88
ZFYVE28Q9HCC9 RNU7-149P-201ENST00000516739 59 ntBASIC3.28□□□□□ -1.88
ZFYVE28Q9HCC9 AC104027.1-201ENST00000521887 300 ntBASIC3.28□□□□□ -1.88
ZFYVE28Q9HCC9 SNORD53-201ENST00000579969 78 ntBASIC3.28□□□□□ -1.88
ZFYVE28Q9HCC9 MIR6817-201ENST00000615588 66 ntBASIC3.28□□□□□ -1.88
ZFYVE28Q9HCC9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.28□□□□□ -1.88
ZFYVE28Q9HCC9 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.28□□□□□ -1.89
ZFYVE28Q9HCC9 MIR562-201ENST00000384894 95 ntBASIC3.27□□□□□ -1.89
ZFYVE28Q9HCC9 MIR592-201ENST00000384959 97 ntBASIC3.27□□□□□ -1.89
ZFYVE28Q9HCC9 RNA5SP274-201ENST00000410484 108 ntBASIC3.27□□□□□ -1.89
ZFYVE28Q9HCC9 Y_RNA.692-201ENST00000516627 105 ntBASIC3.27□□□□□ -1.89
ZFYVE28Q9HCC9 AC097639.2-201ENST00000603159 172 ntBASIC3.27□□□□□ -1.89
ZFYVE28Q9HCC9 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.27□□□□□ -1.89
ZFYVE28Q9HCC9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ZFYVE28Q9HCC9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ZFYVE28Q9HCC9 Y_RNA.91-201ENST00000363042 107 ntBASIC3.26□□□□□ -1.89
ZFYVE28Q9HCC9 SNORD56.3-201ENST00000363507 71 ntBASIC3.26□□□□□ -1.89
ZFYVE28Q9HCC9 SNORD18B-201ENST00000365659 72 ntBASIC3.26□□□□□ -1.89
ZFYVE28Q9HCC9 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
ZFYVE28Q9HCC9 SRIP3-201ENST00000413200 219 ntBASIC3.26□□□□□ -1.89
ZFYVE28Q9HCC9 RPL32P35-201ENST00000415214 394 ntBASIC3.26□□□□□ -1.89
ZFYVE28Q9HCC9 AC233266.1-201ENST00000454518 96 ntBASIC3.26□□□□□ -1.89
ZFYVE28Q9HCC9 AC018868.1-201ENST00000491307 315 ntBASIC3.26□□□□□ -1.89
ZFYVE28Q9HCC9 RNU6-1041P-201ENST00000516254 102 ntBASIC3.26□□□□□ -1.89
ZFYVE28Q9HCC9 RNU6-919P-201ENST00000516731 104 ntBASIC3.26□□□□□ -1.89
ZFYVE28Q9HCC9 MIR4769-201ENST00000584126 77 ntBASIC3.26□□□□□ -1.89
ZFYVE28Q9HCC9 AC131055.1-201ENST00000584626 316 ntBASIC3.26□□□□□ -1.89
ZFYVE28Q9HCC9 AC242852.1-201ENST00000612151 96 ntBASIC3.26□□□□□ -1.89
ZFYVE28Q9HCC9 AL359075.3-201ENST00000613288 217 ntBASIC3.26□□□□□ -1.89
ZFYVE28Q9HCC9 AC244015.1-201ENST00000622301 99 ntBASIC3.26□□□□□ -1.89
ZFYVE28Q9HCC9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
ZFYVE28Q9HCC9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
ZFYVE28Q9HCC9 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms