Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.58□□□□□ -2
SEC61A2Q9H9S3 AL033523.1-201ENST00000605153 153 ntBASIC2.58□□□□□ -2
SEC61A2Q9H9S3 AC006386.2-201ENST00000624491 75 ntBASIC2.58□□□□□ -2
SEC61A2Q9H9S3 AC012005.1-201ENST00000624575 75 ntBASIC2.58□□□□□ -2
SEC61A2Q9H9S3 AP003122.5-201ENST00000527668 3766 ntBASIC2.57□□□□□ -2
SEC61A2Q9H9S3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
SEC61A2Q9H9S3 Y_RNA.120-201ENST00000363304 110 ntBASIC2.57□□□□□ -2
SEC61A2Q9H9S3 SNORA22-201ENST00000383907 134 ntBASIC2.57□□□□□ -2
SEC61A2Q9H9S3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.57□□□□□ -2
SEC61A2Q9H9S3 AL139132.1-201ENST00000431587 344 ntBASIC2.57□□□□□ -2
SEC61A2Q9H9S3 SNORA4.4-201ENST00000515921 135 ntBASIC2.57□□□□□ -2
SEC61A2Q9H9S3 Y_RNA.690-201ENST00000516603 95 ntBASIC2.57□□□□□ -2
SEC61A2Q9H9S3 AL160236.1-201ENST00000556317 195 ntBASIC2.57□□□□□ -2
SEC61A2Q9H9S3 MIR3121-201ENST00000579680 77 ntBASIC2.57□□□□□ -2
SEC61A2Q9H9S3 AC131055.1-201ENST00000584626 316 ntBASIC2.57□□□□□ -2
SEC61A2Q9H9S3 AC073413.2-201ENST00000604332 360 ntBASIC2.57□□□□□ -2
SEC61A2Q9H9S3 MIR7157-201ENST00000635801 60 ntBASIC2.57□□□□□ -2
SEC61A2Q9H9S3 MIR3914-2-201ENST00000637339 95 ntBASIC2.57□□□□□ -2
SEC61A2Q9H9S3 AC009487.4-201ENST00000624969 3585 ntBASIC2.57□□□□□ -2
SEC61A2Q9H9S3 MTND5P32-201ENST00000560711 1802 ntBASIC2.56□□□□□ -2
SEC61A2Q9H9S3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.56□□□□□ -2
SEC61A2Q9H9S3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SEC61A2Q9H9S3 RNU6-309P-201ENST00000364573 106 ntBASIC2.56□□□□□ -2
SEC61A2Q9H9S3 SNORD18B-201ENST00000365659 72 ntBASIC2.56□□□□□ -2
SEC61A2Q9H9S3 Y_RNA.486-201ENST00000384398 107 ntBASIC2.56□□□□□ -2
SEC61A2Q9H9S3 NDUFB4P4-201ENST00000404822 243 ntBASIC2.56□□□□□ -2
SEC61A2Q9H9S3 EEF1A1P41-201ENST00000414667 207 ntBASIC2.56□□□□□ -2
SEC61A2Q9H9S3 AC123900.1-201ENST00000420390 96 ntBASIC2.56□□□□□ -2
SEC61A2Q9H9S3 AC060773.1-201ENST00000421698 310 ntBASIC2.56□□□□□ -2
SEC61A2Q9H9S3 MICF-203ENST00000432679 129 ntBASIC2.56□□□□□ -2
SEC61A2Q9H9S3 AC233266.1-201ENST00000454518 96 ntBASIC2.56□□□□□ -2
SEC61A2Q9H9S3 AC023141.11-201ENST00000508864 202 ntBASIC2.56□□□□□ -2
SEC61A2Q9H9S3 AC093259.1-201ENST00000509755 300 ntBASIC2.56□□□□□ -2
SEC61A2Q9H9S3 SNORD33.1-201ENST00000516213 88 ntBASIC2.56□□□□□ -2
SEC61A2Q9H9S3 RNA5SP153-201ENST00000516498 76 ntBASIC2.56□□□□□ -2
SEC61A2Q9H9S3 RNU6-826P-201ENST00000516827 104 ntBASIC2.56□□□□□ -2
SEC61A2Q9H9S3 RNU2-60P-201ENST00000517290 128 ntBASIC2.56□□□□□ -2
SEC61A2Q9H9S3 EIF4BP1-201ENST00000554881 351 ntBASIC2.56□□□□□ -2
SEC61A2Q9H9S3 AC242852.1-201ENST00000612151 96 ntBASIC2.56□□□□□ -2
SEC61A2Q9H9S3 U2.20-201ENST00000613956 192 ntBASIC2.56□□□□□ -2
SEC61A2Q9H9S3 JPX_2.1-201ENST00000614161 69 ntBASIC2.56□□□□□ -2
SEC61A2Q9H9S3 U6.73-201ENST00000619194 103 ntBASIC2.56□□□□□ -2
SEC61A2Q9H9S3 AC244015.1-201ENST00000622301 99 ntBASIC2.56□□□□□ -2
SEC61A2Q9H9S3 AL137790.1-201ENST00000634283 177 ntBASIC2.56□□□□□ -2
SEC61A2Q9H9S3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SEC61A2Q9H9S3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
SEC61A2Q9H9S3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.55□□□□□ -2
SEC61A2Q9H9S3 MIR340-201ENST00000362125 95 ntBASIC2.55□□□□□ -2
SEC61A2Q9H9S3 MIR512-1-201ENST00000384913 84 ntBASIC2.55□□□□□ -2
SEC61A2Q9H9S3 AC104332.2-201ENST00000429959 156 ntBASIC2.55□□□□□ -2
SEC61A2Q9H9S3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SEC61A2Q9H9S3 AL357134.1-201ENST00000445848 426 ntBASIC2.55□□□□□ -2
SEC61A2Q9H9S3 OR9P1P-201ENST00000496431 281 ntBASIC2.55□□□□□ -2
SEC61A2Q9H9S3 AL136360.1-201ENST00000503377 1900 ntBASIC2.55□□□□□ -2
SEC61A2Q9H9S3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.55□□□□□ -2
SEC61A2Q9H9S3 SNORA18.4-201ENST00000516440 124 ntBASIC2.55□□□□□ -2
SEC61A2Q9H9S3 Y_RNA.709-201ENST00000516952 92 ntBASIC2.55□□□□□ -2
SEC61A2Q9H9S3 RNU1-104P-201ENST00000517280 175 ntBASIC2.55□□□□□ -2
SEC61A2Q9H9S3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
SEC61A2Q9H9S3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.55□□□□□ -2
SEC61A2Q9H9S3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.55□□□□□ -2
SEC61A2Q9H9S3 AC245060.5-201ENST00000610778 3293 ntBASIC2.55□□□□□ -2
SEC61A2Q9H9S3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.54□□□□□ -2
SEC61A2Q9H9S3 AL355596.1-201ENST00000565399 3996 ntBASIC2.54□□□□□ -2
SEC61A2Q9H9S3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
SEC61A2Q9H9S3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SEC61A2Q9H9S3 RNU6-851P-201ENST00000384565 107 ntBASIC2.54□□□□□ -2
SEC61A2Q9H9S3 MIR562-201ENST00000384894 95 ntBASIC2.54□□□□□ -2
SEC61A2Q9H9S3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.54□□□□□ -2
SEC61A2Q9H9S3 AL590004.2-201ENST00000404787 371 ntBASIC2.54□□□□□ -2
SEC61A2Q9H9S3 AC063976.3-201ENST00000426849 329 ntBASIC2.54□□□□□ -2
SEC61A2Q9H9S3 AP001486.1-201ENST00000463339 476 ntBASIC2.54□□□□□ -2
SEC61A2Q9H9S3 CYCTP-201ENST00000504253 315 ntBASIC2.54□□□□□ -2
SEC61A2Q9H9S3 YWHAEP4-201ENST00000505390 198 ntBASIC2.54□□□□□ -2
SEC61A2Q9H9S3 RNU6-1291P-201ENST00000516591 104 ntBASIC2.54□□□□□ -2
SEC61A2Q9H9S3 RNU6-856P-201ENST00000516959 98 ntBASIC2.54□□□□□ -2
SEC61A2Q9H9S3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.54□□□□□ -2
SEC61A2Q9H9S3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.54□□□□□ -2
SEC61A2Q9H9S3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.54□□□□□ -2
SEC61A2Q9H9S3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
SEC61A2Q9H9S3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.53□□□□□ -2
SEC61A2Q9H9S3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.53□□□□□ -2
SEC61A2Q9H9S3 Y_RNA.280-201ENST00000364765 112 ntBASIC2.53□□□□□ -2
SEC61A2Q9H9S3 Y_RNA.332-201ENST00000365271 113 ntBASIC2.53□□□□□ -2
SEC61A2Q9H9S3 MIR23A-201ENST00000385245 73 ntBASIC2.53□□□□□ -2
SEC61A2Q9H9S3 SNORA12.1-201ENST00000390873 148 ntBASIC2.53□□□□□ -2
SEC61A2Q9H9S3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.53□□□□□ -2
SEC61A2Q9H9S3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.53□□□□□ -2
SEC61A2Q9H9S3 RPS29P12-201ENST00000460178 152 ntBASIC2.53□□□□□ -2
SEC61A2Q9H9S3 SEM1P1-201ENST00000506694 209 ntBASIC2.53□□□□□ -2
SEC61A2Q9H9S3 AC096725.1-201ENST00000514266 313 ntBASIC2.53□□□□□ -2
SEC61A2Q9H9S3 RNU6-1041P-201ENST00000516254 102 ntBASIC2.53□□□□□ -2
SEC61A2Q9H9S3 RNU6-781P-201ENST00000516377 101 ntBASIC2.53□□□□□ -2
SEC61A2Q9H9S3 AC097639.2-201ENST00000603159 172 ntBASIC2.53□□□□□ -2
SEC61A2Q9H9S3 AL355297.2-201ENST00000604792 129 ntBASIC2.53□□□□□ -2
SEC61A2Q9H9S3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.53□□□□□ -2
SEC61A2Q9H9S3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.53□□□□□ -2.01
SEC61A2Q9H9S3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2.01
SEC61A2Q9H9S3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SEC61A2Q9H9S3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 179.1 ms