Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 AC136628.3-201ENST00000521868 290 ntBASIC1.6□□□□□ -2.15
PCNX3Q9H6A9 CBX3P4-201ENST00000538909 354 ntBASIC1.6□□□□□ -2.15
PCNX3Q9H6A9 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.6□□□□□ -2.15
PCNX3Q9H6A9 MIR4438-201ENST00000585271 93 ntBASIC1.6□□□□□ -2.15
PCNX3Q9H6A9 POLR3GP1-201ENST00000594073 261 ntBASIC1.6□□□□□ -2.15
PCNX3Q9H6A9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.6□□□□□ -2.15
PCNX3Q9H6A9 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
PCNX3Q9H6A9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
PCNX3Q9H6A9 Y_RNA.200-201ENST00000364018 102 ntBASIC1.59□□□□□ -2.15
PCNX3Q9H6A9 SNORA6-201ENST00000384033 151 ntBASIC1.59□□□□□ -2.15
PCNX3Q9H6A9 MIR1262-201ENST00000408276 93 ntBASIC1.59□□□□□ -2.15
PCNX3Q9H6A9 RNU2-61P-201ENST00000411069 191 ntBASIC1.59□□□□□ -2.15
PCNX3Q9H6A9 COX6CP14-201ENST00000469580 174 ntBASIC1.59□□□□□ -2.15
PCNX3Q9H6A9 RNU6-1337P-201ENST00000516525 95 ntBASIC1.59□□□□□ -2.15
PCNX3Q9H6A9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.59□□□□□ -2.15
PCNX3Q9H6A9 MIR4658-201ENST00000584344 65 ntBASIC1.59□□□□□ -2.15
PCNX3Q9H6A9 AC078938.1-201ENST00000620993 318 ntBASIC1.59□□□□□ -2.15
PCNX3Q9H6A9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
PCNX3Q9H6A9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.15
PCNX3Q9H6A9 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
PCNX3Q9H6A9 RNU6-1264P-201ENST00000383891 107 ntBASIC1.59□□□□□ -2.16
PCNX3Q9H6A9 RNU6-514P-201ENST00000384208 107 ntBASIC1.59□□□□□ -2.16
PCNX3Q9H6A9 Y_RNA.785-201ENST00000384290 109 ntBASIC1.59□□□□□ -2.16
PCNX3Q9H6A9 RNU6-417P-201ENST00000384712 107 ntBASIC1.59□□□□□ -2.16
PCNX3Q9H6A9 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.59□□□□□ -2.16
PCNX3Q9H6A9 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.59□□□□□ -2.16
PCNX3Q9H6A9 RNU7-141P-201ENST00000459304 62 ntBASIC1.59□□□□□ -2.16
PCNX3Q9H6A9 RNU6-295P-201ENST00000516901 104 ntBASIC1.59□□□□□ -2.16
PCNX3Q9H6A9 MIR3126-201ENST00000577443 74 ntBASIC1.59□□□□□ -2.16
PCNX3Q9H6A9 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.59□□□□□ -2.16
PCNX3Q9H6A9 MIR3935-201ENST00000583472 104 ntBASIC1.59□□□□□ -2.16
PCNX3Q9H6A9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.59□□□□□ -2.16
PCNX3Q9H6A9 MIR6895-201ENST00000613497 78 ntBASIC1.59□□□□□ -2.16
PCNX3Q9H6A9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.59□□□□□ -2.16
PCNX3Q9H6A9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
PCNX3Q9H6A9 CENPCP1-201ENST00000533085 2578 ntBASIC1.58□□□□□ -2.16
PCNX3Q9H6A9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
PCNX3Q9H6A9 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
PCNX3Q9H6A9 MIR411-201ENST00000362239 96 ntBASIC1.58□□□□□ -2.16
PCNX3Q9H6A9 RNA5SP493-201ENST00000364115 91 ntBASIC1.58□□□□□ -2.16
PCNX3Q9H6A9 SNORA72.4-201ENST00000384174 132 ntBASIC1.58□□□□□ -2.16
PCNX3Q9H6A9 RNU11-3P-201ENST00000391111 133 ntBASIC1.58□□□□□ -2.16
PCNX3Q9H6A9 RNU11-5P-201ENST00000391216 129 ntBASIC1.58□□□□□ -2.16
PCNX3Q9H6A9 RNU6-1186P-201ENST00000410429 97 ntBASIC1.58□□□□□ -2.16
PCNX3Q9H6A9 RNU2-64P-201ENST00000411315 191 ntBASIC1.58□□□□□ -2.16
PCNX3Q9H6A9 RN7SKP101-201ENST00000411376 320 ntBASIC1.58□□□□□ -2.16
PCNX3Q9H6A9 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.58□□□□□ -2.16
PCNX3Q9H6A9 RNU7-94P-201ENST00000459576 63 ntBASIC1.58□□□□□ -2.16
PCNX3Q9H6A9 RNA5SP20-201ENST00000515976 84 ntBASIC1.58□□□□□ -2.16
PCNX3Q9H6A9 RNA5SP364-201ENST00000516938 78 ntBASIC1.58□□□□□ -2.16
PCNX3Q9H6A9 RNU6-548P-201ENST00000517083 115 ntBASIC1.58□□□□□ -2.16
PCNX3Q9H6A9 RNU6-667P-201ENST00000517186 102 ntBASIC1.58□□□□□ -2.16
PCNX3Q9H6A9 MIR4529-201ENST00000578110 78 ntBASIC1.58□□□□□ -2.16
PCNX3Q9H6A9 AL008718.3-201ENST00000610217 321 ntBASIC1.58□□□□□ -2.16
PCNX3Q9H6A9 MIR6840-201ENST00000611937 71 ntBASIC1.58□□□□□ -2.16
PCNX3Q9H6A9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
PCNX3Q9H6A9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.58□□□□□ -2.16
PCNX3Q9H6A9 Y_RNA.124-201ENST00000363339 93 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 RNU6-271P-201ENST00000363858 105 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 SNORA20B-201ENST00000384220 132 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 SNORD116-13-201ENST00000384408 92 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 Y_RNA.518-201ENST00000384552 113 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 RNU2-14P-201ENST00000411053 191 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 AC010154.1-201ENST00000425857 269 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 AC025647.1-201ENST00000517879 253 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 CYCSP26-201ENST00000534107 320 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 MIR4282-201ENST00000583613 67 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 AC005972.2-201ENST00000604690 348 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 AC073349.3-201ENST00000617616 186 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 RNU6-1266P-201ENST00000362794 105 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 RNU6-899P-201ENST00000363947 107 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 Y_RNA.217-201ENST00000364214 105 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 RNU6-200P-201ENST00000364743 107 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 SNORA67.1-201ENST00000364749 141 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 SNORA25B-201ENST00000365507 128 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 RNU4-17P-201ENST00000365598 141 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 RNU4-70P-201ENST00000384579 139 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 MT-TT-201ENST00000387460 66 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 RNU6-763P-201ENST00000390865 106 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 RNU2-7P-201ENST00000410794 178 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 BX510359.4-201ENST00000423750 193 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 Y_RNA.641-201ENST00000459414 105 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 AC027419.1-201ENST00000522976 328 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 AP002392.1-201ENST00000537692 208 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 AC015720.1-201ENST00000565251 277 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 AC130289.1-201ENST00000577321 73 ntBASIC1.57□□□□□ -2.16
PCNX3Q9H6A9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
PCNX3Q9H6A9 Y_RNA.287-201ENST00000364853 94 ntBASIC1.56□□□□□ -2.16
PCNX3Q9H6A9 AL135790.2-201ENST00000437701 267 ntBASIC1.56□□□□□ -2.16
PCNX3Q9H6A9 AC091959.1-201ENST00000495857 238 ntBASIC1.56□□□□□ -2.16
PCNX3Q9H6A9 RPL23AP63-201ENST00000498752 471 ntBASIC1.56□□□□□ -2.16
PCNX3Q9H6A9 RNU6-191P-201ENST00000516295 94 ntBASIC1.56□□□□□ -2.16
PCNX3Q9H6A9 AL353149.1-201ENST00000610667 244 ntBASIC1.56□□□□□ -2.16
PCNX3Q9H6A9 snoU18.1-201ENST00000629629 71 ntBASIC1.56□□□□□ -2.16
PCNX3Q9H6A9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.56□□□□□ -2.16
PCNX3Q9H6A9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
PCNX3Q9H6A9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms