Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
RNF41Q9H4P4 RNU6-407P-201ENST00000365280 104 ntBASIC1.27□□□□□ -2.21
RNF41Q9H4P4 SNORD42.2-201ENST00000365570 69 ntBASIC1.27□□□□□ -2.21
RNF41Q9H4P4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.27□□□□□ -2.21
RNF41Q9H4P4 Y_RNA.419-201ENST00000384041 102 ntBASIC1.27□□□□□ -2.21
RNF41Q9H4P4 RNY1P14-201ENST00000384426 108 ntBASIC1.27□□□□□ -2.21
RNF41Q9H4P4 MIR1285-1-201ENST00000408593 84 ntBASIC1.27□□□□□ -2.21
RNF41Q9H4P4 AC027119.1-201ENST00000440877 241 ntBASIC1.27□□□□□ -2.21
RNF41Q9H4P4 SUMO1P2-201ENST00000452524 304 ntBASIC1.27□□□□□ -2.21
RNF41Q9H4P4 RNU7-94P-201ENST00000459576 63 ntBASIC1.27□□□□□ -2.21
RNF41Q9H4P4 HMGN1P7-201ENST00000491722 313 ntBASIC1.27□□□□□ -2.21
RNF41Q9H4P4 MIR4423-201ENST00000580922 80 ntBASIC1.27□□□□□ -2.21
RNF41Q9H4P4 AL008636.1-201ENST00000625038 1018 ntBASIC1.27□□□□□ -2.21
RNF41Q9H4P4 AL606534.2-204ENST00000635008 178 ntBASIC1.27□□□□□ -2.21
RNF41Q9H4P4 RNU6-867P-201ENST00000364956 107 ntBASIC1.26□□□□□ -2.21
RNF41Q9H4P4 Y_RNA.458-201ENST00000384240 102 ntBASIC1.26□□□□□ -2.21
RNF41Q9H4P4 RNU6-950P-201ENST00000384651 107 ntBASIC1.26□□□□□ -2.21
RNF41Q9H4P4 RN7SKP200-201ENST00000410564 320 ntBASIC1.26□□□□□ -2.21
RNF41Q9H4P4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.26□□□□□ -2.21
RNF41Q9H4P4 AC245517.4-201ENST00000448601 281 ntBASIC1.26□□□□□ -2.21
RNF41Q9H4P4 AC091021.1-201ENST00000468051 388 ntBASIC1.26□□□□□ -2.21
RNF41Q9H4P4 RNU6-436P-201ENST00000516171 114 ntBASIC1.26□□□□□ -2.21
RNF41Q9H4P4 SNORA40.14-201ENST00000516543 86 ntBASIC1.26□□□□□ -2.21
RNF41Q9H4P4 MIR4422-201ENST00000581938 83 ntBASIC1.26□□□□□ -2.21
RNF41Q9H4P4 AC022441.3-201ENST00000605737 136 ntBASIC1.26□□□□□ -2.21
RNF41Q9H4P4 AC127459.3-201ENST00000624328 466 ntBASIC1.26□□□□□ -2.21
RNF41Q9H4P4 RNU6-1123P-201ENST00000362347 106 ntBASIC1.25□□□□□ -2.21
RNF41Q9H4P4 Y_RNA.446-201ENST00000384178 104 ntBASIC1.25□□□□□ -2.21
RNF41Q9H4P4 RPS27P16-201ENST00000425758 201 ntBASIC1.25□□□□□ -2.21
RNF41Q9H4P4 RPS29P28-201ENST00000446439 141 ntBASIC1.25□□□□□ -2.21
RNF41Q9H4P4 Y_RNA.639-201ENST00000458981 102 ntBASIC1.25□□□□□ -2.21
RNF41Q9H4P4 RNU7-34P-201ENST00000459394 64 ntBASIC1.25□□□□□ -2.21
RNF41Q9H4P4 COX6CP14-201ENST00000469580 174 ntBASIC1.25□□□□□ -2.21
RNF41Q9H4P4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.25□□□□□ -2.21
RNF41Q9H4P4 RNA5SP445-201ENST00000515889 115 ntBASIC1.25□□□□□ -2.21
RNF41Q9H4P4 Y_RNA.661-201ENST00000516003 99 ntBASIC1.25□□□□□ -2.21
RNF41Q9H4P4 RNU6-63P-201ENST00000516690 95 ntBASIC1.25□□□□□ -2.21
RNF41Q9H4P4 RNU6-341P-201ENST00000516973 96 ntBASIC1.25□□□□□ -2.21
RNF41Q9H4P4 RNU6-902P-201ENST00000517212 91 ntBASIC1.25□□□□□ -2.21
RNF41Q9H4P4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.25□□□□□ -2.21
RNF41Q9H4P4 AC005176.2-201ENST00000596933 147 ntBASIC1.25□□□□□ -2.21
RNF41Q9H4P4 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.25□□□□□ -2.21
RNF41Q9H4P4 Y_RNA.172-201ENST00000363765 102 ntBASIC1.24□□□□□ -2.21
RNF41Q9H4P4 Y_RNA.230-201ENST00000364348 109 ntBASIC1.24□□□□□ -2.21
RNF41Q9H4P4 RNU5E-4P-201ENST00000364931 120 ntBASIC1.24□□□□□ -2.21
RNF41Q9H4P4 MIR628-201ENST00000385229 95 ntBASIC1.24□□□□□ -2.21
RNF41Q9H4P4 AL031003.1-201ENST00000404229 172 ntBASIC1.24□□□□□ -2.21
RNF41Q9H4P4 RNU2-61P-201ENST00000411069 191 ntBASIC1.24□□□□□ -2.21
RNF41Q9H4P4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.24□□□□□ -2.21
RNF41Q9H4P4 MIR4781-201ENST00000585250 76 ntBASIC1.24□□□□□ -2.21
RNF41Q9H4P4 AC007485.1-201ENST00000616755 206 ntBASIC1.24□□□□□ -2.21
RNF41Q9H4P4 MIR8063-201ENST00000621930 81 ntBASIC1.24□□□□□ -2.21
RNF41Q9H4P4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
RNF41Q9H4P4 MTND4P29-201ENST00000503122 1372 ntBASIC1.23□□□□□ -2.21
RNF41Q9H4P4 Y_RNA.31-201ENST00000362574 102 ntBASIC1.23□□□□□ -2.21
RNF41Q9H4P4 Y_RNA.39-201ENST00000362620 98 ntBASIC1.23□□□□□ -2.21
RNF41Q9H4P4 RNU6-505P-201ENST00000384427 107 ntBASIC1.23□□□□□ -2.21
RNF41Q9H4P4 Y_RNA.570-201ENST00000384750 101 ntBASIC1.23□□□□□ -2.21
RNF41Q9H4P4 RNA5SP511-201ENST00000410487 115 ntBASIC1.23□□□□□ -2.21
RNF41Q9H4P4 RPL30P13-201ENST00000418873 348 ntBASIC1.23□□□□□ -2.21
RNF41Q9H4P4 AL160004.2-201ENST00000432935 350 ntBASIC1.23□□□□□ -2.21
RNF41Q9H4P4 HSPE1P13-201ENST00000451143 297 ntBASIC1.23□□□□□ -2.21
RNF41Q9H4P4 OR9P1P-201ENST00000496431 281 ntBASIC1.23□□□□□ -2.21
RNF41Q9H4P4 AC079140.2-201ENST00000506193 142 ntBASIC1.23□□□□□ -2.21
RNF41Q9H4P4 RNU6-1337P-201ENST00000516525 95 ntBASIC1.23□□□□□ -2.21
RNF41Q9H4P4 RPL21P9-201ENST00000556149 474 ntBASIC1.23□□□□□ -2.21
RNF41Q9H4P4 SNORD114-21-201ENST00000606412 72 ntBASIC1.23□□□□□ -2.21
RNF41Q9H4P4 AL021879.1-201ENST00000611756 288 ntBASIC1.23□□□□□ -2.21
RNF41Q9H4P4 MIR369-201ENST00000362155 70 ntBASIC1.22□□□□□ -2.21
RNF41Q9H4P4 MIR26B-201ENST00000362251 77 ntBASIC1.22□□□□□ -2.21
RNF41Q9H4P4 SNORA1B-201ENST00000362535 133 ntBASIC1.22□□□□□ -2.21
RNF41Q9H4P4 SNORD81.1-201ENST00000363064 77 ntBASIC1.22□□□□□ -2.21
RNF41Q9H4P4 Y_RNA.394-201ENST00000383942 103 ntBASIC1.22□□□□□ -2.21
RNF41Q9H4P4 RNU6-939P-201ENST00000384634 107 ntBASIC1.22□□□□□ -2.21
RNF41Q9H4P4 RNU6-136P-201ENST00000384663 107 ntBASIC1.22□□□□□ -2.21
RNF41Q9H4P4 MIR513A1-201ENST00000385138 129 ntBASIC1.22□□□□□ -2.21
RNF41Q9H4P4 MIR1302-11-201ENST00000408051 138 ntBASIC1.22□□□□□ -2.21
RNF41Q9H4P4 MIR1302-9-201ENST00000408365 138 ntBASIC1.22□□□□□ -2.21
RNF41Q9H4P4 MIR1302-10-201ENST00000408734 138 ntBASIC1.22□□□□□ -2.21
RNF41Q9H4P4 PMCHL1-202ENST00000423102 261 ntBASIC1.22□□□□□ -2.21
RNF41Q9H4P4 PGBD4P5-201ENST00000445958 426 ntBASIC1.22□□□□□ -2.21
RNF41Q9H4P4 RNU6-1278P-201ENST00000516130 107 ntBASIC1.22□□□□□ -2.21
RNF41Q9H4P4 SUMO2P16-201ENST00000519475 264 ntBASIC1.22□□□□□ -2.21
RNF41Q9H4P4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
RNF41Q9H4P4 AL162424.1-201ENST00000602325 221 ntBASIC1.22□□□□□ -2.21
RNF41Q9H4P4 MIR1302-2-201ENST00000607096 138 ntBASIC1.22□□□□□ -2.21
RNF41Q9H4P4 AL365434.2-201ENST00000607979 234 ntBASIC1.22□□□□□ -2.21
RNF41Q9H4P4 AC006157.1-201ENST00000611750 366 ntBASIC1.22□□□□□ -2.21
RNF41Q9H4P4 AL513423.1-201ENST00000621695 132 ntBASIC1.22□□□□□ -2.21
RNF41Q9H4P4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.22□□□□□ -2.21
RNF41Q9H4P4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.21□□□□□ -2.22
RNF41Q9H4P4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.21□□□□□ -2.22
RNF41Q9H4P4 MIRLET7C-201ENST00000362160 84 ntBASIC1.21□□□□□ -2.22
RNF41Q9H4P4 Y_RNA.4-201ENST00000362333 112 ntBASIC1.21□□□□□ -2.22
RNF41Q9H4P4 RNU6-474P-201ENST00000384243 107 ntBASIC1.21□□□□□ -2.22
RNF41Q9H4P4 Y_RNA.462-201ENST00000384268 102 ntBASIC1.21□□□□□ -2.22
RNF41Q9H4P4 RNU6-376P-201ENST00000384731 106 ntBASIC1.21□□□□□ -2.22
RNF41Q9H4P4 AL034345.1-201ENST00000407768 123 ntBASIC1.21□□□□□ -2.22
RNF41Q9H4P4 AL354751.2-201ENST00000415471 210 ntBASIC1.21□□□□□ -2.22
RNF41Q9H4P4 AL162725.1-201ENST00000435405 301 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms