Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 Y_RNA.230-201ENST00000364348 109 ntBASIC1.39□□□□□ -2.19
CCDC68Q9H2F9 SNORA2.2-201ENST00000365473 135 ntBASIC1.39□□□□□ -2.19
CCDC68Q9H2F9 AL451046.2-201ENST00000403074 277 ntBASIC1.39□□□□□ -2.19
CCDC68Q9H2F9 RNU7-152P-201ENST00000458982 64 ntBASIC1.39□□□□□ -2.19
CCDC68Q9H2F9 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.39□□□□□ -2.19
CCDC68Q9H2F9 RNU1-92P-201ENST00000517017 135 ntBASIC1.39□□□□□ -2.19
CCDC68Q9H2F9 RNU6-165P-201ENST00000517170 99 ntBASIC1.39□□□□□ -2.19
CCDC68Q9H2F9 AC093027.1-201ENST00000546698 429 ntBASIC1.39□□□□□ -2.19
CCDC68Q9H2F9 AC090049.2-201ENST00000550377 109 ntBASIC1.39□□□□□ -2.19
CCDC68Q9H2F9 AL645939.4-201ENST00000604495 135 ntBASIC1.39□□□□□ -2.19
CCDC68Q9H2F9 MIR4272-201ENST00000635924 64 ntBASIC1.39□□□□□ -2.19
CCDC68Q9H2F9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CCDC68Q9H2F9 RNA5SP432-201ENST00000362480 116 ntBASIC1.38□□□□□ -2.19
CCDC68Q9H2F9 RNU6-1080P-201ENST00000383982 107 ntBASIC1.38□□□□□ -2.19
CCDC68Q9H2F9 MIR653-201ENST00000385279 96 ntBASIC1.38□□□□□ -2.19
CCDC68Q9H2F9 RPS4XP11-201ENST00000446897 772 ntBASIC1.38□□□□□ -2.19
CCDC68Q9H2F9 AC092447.9-201ENST00000603395 144 ntBASIC1.38□□□□□ -2.19
CCDC68Q9H2F9 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.38□□□□□ -2.19
CCDC68Q9H2F9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
CCDC68Q9H2F9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CCDC68Q9H2F9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CCDC68Q9H2F9 MIRLET7C-201ENST00000362160 84 ntBASIC1.37□□□□□ -2.19
CCDC68Q9H2F9 RNU6-1115P-201ENST00000362490 106 ntBASIC1.37□□□□□ -2.19
CCDC68Q9H2F9 Y_RNA.58-201ENST00000362807 102 ntBASIC1.37□□□□□ -2.19
CCDC68Q9H2F9 RNU1-17P-201ENST00000363022 152 ntBASIC1.37□□□□□ -2.19
CCDC68Q9H2F9 SNORD68-201ENST00000363214 84 ntBASIC1.37□□□□□ -2.19
CCDC68Q9H2F9 Y_RNA.154-201ENST00000363624 102 ntBASIC1.37□□□□□ -2.19
CCDC68Q9H2F9 RNA5SP99-201ENST00000364020 114 ntBASIC1.37□□□□□ -2.19
CCDC68Q9H2F9 RNY3P1-201ENST00000365085 102 ntBASIC1.37□□□□□ -2.19
CCDC68Q9H2F9 RNY3-201ENST00000365484 102 ntBASIC1.37□□□□□ -2.19
CCDC68Q9H2F9 SNORD116-13-201ENST00000384408 92 ntBASIC1.37□□□□□ -2.19
CCDC68Q9H2F9 RNU2-61P-201ENST00000411069 191 ntBASIC1.37□□□□□ -2.19
CCDC68Q9H2F9 RNU6-1199P-201ENST00000411249 104 ntBASIC1.37□□□□□ -2.19
CCDC68Q9H2F9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC68Q9H2F9 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC68Q9H2F9 AL133373.1-201ENST00000497098 94 ntBASIC1.37□□□□□ -2.19
CCDC68Q9H2F9 RNU6-947P-201ENST00000516264 106 ntBASIC1.37□□□□□ -2.19
CCDC68Q9H2F9 RNU6-917P-201ENST00000516294 104 ntBASIC1.37□□□□□ -2.19
CCDC68Q9H2F9 RNU7-40P-201ENST00000516397 64 ntBASIC1.37□□□□□ -2.19
CCDC68Q9H2F9 RNU6-1116P-201ENST00000517269 99 ntBASIC1.37□□□□□ -2.19
CCDC68Q9H2F9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC68Q9H2F9 AL117336.2-201ENST00000602435 335 ntBASIC1.37□□□□□ -2.19
CCDC68Q9H2F9 AC112487.2-201ENST00000637950 304 ntBASIC1.37□□□□□ -2.19
CCDC68Q9H2F9 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.37□□□□□ -2.19
CCDC68Q9H2F9 ZNF209P-201ENST00000593450 2304 ntBASIC1.37□□□□□ -2.19
CCDC68Q9H2F9 Y_RNA.39-201ENST00000362620 98 ntBASIC1.36□□□□□ -2.19
CCDC68Q9H2F9 RNU6-163P-201ENST00000384396 106 ntBASIC1.36□□□□□ -2.19
CCDC68Q9H2F9 RNU6-1105P-201ENST00000384774 107 ntBASIC1.36□□□□□ -2.19
CCDC68Q9H2F9 AC104332.1-201ENST00000440471 797 ntBASIC1.36□□□□□ -2.19
CCDC68Q9H2F9 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.36□□□□□ -2.19
CCDC68Q9H2F9 RNU6-436P-201ENST00000516171 114 ntBASIC1.36□□□□□ -2.19
CCDC68Q9H2F9 RNA5SP458-201ENST00000516188 119 ntBASIC1.36□□□□□ -2.19
CCDC68Q9H2F9 RN7SKP295-201ENST00000517264 153 ntBASIC1.36□□□□□ -2.19
CCDC68Q9H2F9 AC011604.1-201ENST00000545978 196 ntBASIC1.36□□□□□ -2.19
CCDC68Q9H2F9 RPS29P30-201ENST00000600975 111 ntBASIC1.36□□□□□ -2.19
CCDC68Q9H2F9 AC022441.3-201ENST00000605737 136 ntBASIC1.36□□□□□ -2.19
CCDC68Q9H2F9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.36□□□□□ -2.19
CCDC68Q9H2F9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.36□□□□□ -2.19
CCDC68Q9H2F9 RNU6-1175P-201ENST00000365200 107 ntBASIC1.35□□□□□ -2.19
CCDC68Q9H2F9 MIR618-201ENST00000385287 98 ntBASIC1.35□□□□□ -2.19
CCDC68Q9H2F9 MIR891A-201ENST00000401237 79 ntBASIC1.35□□□□□ -2.19
CCDC68Q9H2F9 AC015922.2-201ENST00000435593 184 ntBASIC1.35□□□□□ -2.19
CCDC68Q9H2F9 RNA5SP61-201ENST00000516453 100 ntBASIC1.35□□□□□ -2.19
CCDC68Q9H2F9 AC120024.3-201ENST00000603167 156 ntBASIC1.35□□□□□ -2.19
CCDC68Q9H2F9 AL138825.1-201ENST00000618587 192 ntBASIC1.35□□□□□ -2.19
CCDC68Q9H2F9 AC104985.2-201ENST00000620598 500 ntBASIC1.35□□□□□ -2.19
CCDC68Q9H2F9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.35□□□□□ -2.19
CCDC68Q9H2F9 AC091812.1-201ENST00000432235 1948 ntBASIC1.34□□□□□ -2.19
CCDC68Q9H2F9 Y_RNA.172-201ENST00000363765 102 ntBASIC1.34□□□□□ -2.19
CCDC68Q9H2F9 SNORA25-201ENST00000384384 134 ntBASIC1.34□□□□□ -2.19
CCDC68Q9H2F9 Y_RNA.496-201ENST00000384444 101 ntBASIC1.34□□□□□ -2.19
CCDC68Q9H2F9 MIR222-201ENST00000384992 110 ntBASIC1.34□□□□□ -2.19
CCDC68Q9H2F9 SNORD41-201ENST00000386967 70 ntBASIC1.34□□□□□ -2.19
CCDC68Q9H2F9 MIR758-201ENST00000390227 88 ntBASIC1.34□□□□□ -2.19
CCDC68Q9H2F9 CYCTP-201ENST00000504253 315 ntBASIC1.34□□□□□ -2.19
CCDC68Q9H2F9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.34□□□□□ -2.19
CCDC68Q9H2F9 RNU6-966P-201ENST00000516479 104 ntBASIC1.34□□□□□ -2.19
CCDC68Q9H2F9 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.34□□□□□ -2.19
CCDC68Q9H2F9 AL357312.1-201ENST00000603879 298 ntBASIC1.34□□□□□ -2.19
CCDC68Q9H2F9 Y_RNA.772-201ENST00000606692 102 ntBASIC1.34□□□□□ -2.19
CCDC68Q9H2F9 BX284668.6-201ENST00000606899 438 ntBASIC1.34□□□□□ -2.19
CCDC68Q9H2F9 Y_RNA.804-201ENST00000615262 101 ntBASIC1.34□□□□□ -2.19
CCDC68Q9H2F9 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.34□□□□□ -2.19
CCDC68Q9H2F9 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
CCDC68Q9H2F9 Y_RNA.329-201ENST00000365209 107 ntBASIC1.33□□□□□ -2.2
CCDC68Q9H2F9 RNY3P14-201ENST00000384309 102 ntBASIC1.33□□□□□ -2.2
CCDC68Q9H2F9 PIGPP3-201ENST00000425307 415 ntBASIC1.33□□□□□ -2.2
CCDC68Q9H2F9 AC005042.3-201ENST00000453230 174 ntBASIC1.33□□□□□ -2.2
CCDC68Q9H2F9 RPL39P39-201ENST00000455840 151 ntBASIC1.33□□□□□ -2.2
CCDC68Q9H2F9 SNORA31.2-201ENST00000516019 134 ntBASIC1.33□□□□□ -2.2
CCDC68Q9H2F9 RNU6-976P-201ENST00000516086 111 ntBASIC1.33□□□□□ -2.2
CCDC68Q9H2F9 RN7SKP179-201ENST00000516126 217 ntBASIC1.33□□□□□ -2.2
CCDC68Q9H2F9 SNORA70.22-201ENST00000517160 124 ntBASIC1.33□□□□□ -2.2
CCDC68Q9H2F9 AC022616.4-201ENST00000522985 181 ntBASIC1.33□□□□□ -2.2
CCDC68Q9H2F9 MIR4303-201ENST00000581299 66 ntBASIC1.33□□□□□ -2.2
CCDC68Q9H2F9 MIR5188-201ENST00000583467 113 ntBASIC1.33□□□□□ -2.2
CCDC68Q9H2F9 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.33□□□□□ -2.2
CCDC68Q9H2F9 AL022345.2-201ENST00000606307 135 ntBASIC1.33□□□□□ -2.2
CCDC68Q9H2F9 AC004832.4-201ENST00000608952 331 ntBASIC1.33□□□□□ -2.2
CCDC68Q9H2F9 AL591926.4-201ENST00000616895 298 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms