Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 RNA5SP125-201ENST00000364843 120 ntBASIC3.1□□□□□ -1.91
BHLHE41Q9C0J9 RNU6-160P-201ENST00000384591 107 ntBASIC3.1□□□□□ -1.91
BHLHE41Q9C0J9 MIR515-2-201ENST00000384883 83 ntBASIC3.1□□□□□ -1.91
BHLHE41Q9C0J9 MIR515-1-201ENST00000384884 83 ntBASIC3.1□□□□□ -1.91
BHLHE41Q9C0J9 MIR1263-201ENST00000408324 86 ntBASIC3.1□□□□□ -1.91
BHLHE41Q9C0J9 RPL32P35-201ENST00000415214 394 ntBASIC3.1□□□□□ -1.91
BHLHE41Q9C0J9 AC003685.2-201ENST00000422795 395 ntBASIC3.1□□□□□ -1.91
BHLHE41Q9C0J9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.1□□□□□ -1.91
BHLHE41Q9C0J9 RNU7-94P-201ENST00000459576 63 ntBASIC3.1□□□□□ -1.91
BHLHE41Q9C0J9 RN7SL636P-201ENST00000497504 294 ntBASIC3.1□□□□□ -1.91
BHLHE41Q9C0J9 RNU1-143P-201ENST00000516296 146 ntBASIC3.1□□□□□ -1.91
BHLHE41Q9C0J9 AP002004.2-201ENST00000531656 154 ntBASIC3.1□□□□□ -1.91
BHLHE41Q9C0J9 MIR3616-201ENST00000584070 92 ntBASIC3.1□□□□□ -1.91
BHLHE41Q9C0J9 U1.23-201ENST00000610293 146 ntBASIC3.1□□□□□ -1.91
BHLHE41Q9C0J9 RNU1-68P-201ENST00000615382 146 ntBASIC3.1□□□□□ -1.91
BHLHE41Q9C0J9 U1.39-201ENST00000621562 146 ntBASIC3.1□□□□□ -1.91
BHLHE41Q9C0J9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
BHLHE41Q9C0J9 AL355596.1-201ENST00000565399 3996 ntBASIC3.09□□□□□ -1.91
BHLHE41Q9C0J9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
BHLHE41Q9C0J9 RNU6-147P-201ENST00000383983 107 ntBASIC3.09□□□□□ -1.91
BHLHE41Q9C0J9 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
BHLHE41Q9C0J9 RPS27P29-201ENST00000463110 252 ntBASIC3.09□□□□□ -1.91
BHLHE41Q9C0J9 AL049830.1-201ENST00000468034 425 ntBASIC3.09□□□□□ -1.91
BHLHE41Q9C0J9 RN7SL601P-201ENST00000471221 293 ntBASIC3.09□□□□□ -1.91
BHLHE41Q9C0J9 RNU6-1149P-201ENST00000516810 97 ntBASIC3.09□□□□□ -1.91
BHLHE41Q9C0J9 AC068657.1-201ENST00000520807 306 ntBASIC3.09□□□□□ -1.91
BHLHE41Q9C0J9 MIR4276-201ENST00000584832 70 ntBASIC3.09□□□□□ -1.91
BHLHE41Q9C0J9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.09□□□□□ -1.91
BHLHE41Q9C0J9 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.09□□□□□ -1.91
BHLHE41Q9C0J9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
BHLHE41Q9C0J9 MTND5P18-201ENST00000445624 1801 ntBASIC3.09□□□□□ -1.92
BHLHE41Q9C0J9 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
BHLHE41Q9C0J9 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
BHLHE41Q9C0J9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
BHLHE41Q9C0J9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
BHLHE41Q9C0J9 SNORA1B-201ENST00000362535 133 ntBASIC3.08□□□□□ -1.92
BHLHE41Q9C0J9 SNORA33-201ENST00000363664 130 ntBASIC3.08□□□□□ -1.92
BHLHE41Q9C0J9 RNU6-461P-201ENST00000364195 107 ntBASIC3.08□□□□□ -1.92
BHLHE41Q9C0J9 RNVU1-14-201ENST00000384770 164 ntBASIC3.08□□□□□ -1.92
BHLHE41Q9C0J9 MIR490-201ENST00000384865 128 ntBASIC3.08□□□□□ -1.92
BHLHE41Q9C0J9 AC007064.1-201ENST00000412238 351 ntBASIC3.08□□□□□ -1.92
BHLHE41Q9C0J9 AC009238.1-201ENST00000442165 424 ntBASIC3.08□□□□□ -1.92
BHLHE41Q9C0J9 AC009237.6-201ENST00000446969 424 ntBASIC3.08□□□□□ -1.92
BHLHE41Q9C0J9 RNU1-131P-201ENST00000458943 161 ntBASIC3.08□□□□□ -1.92
BHLHE41Q9C0J9 AC091826.1-201ENST00000514065 313 ntBASIC3.08□□□□□ -1.92
BHLHE41Q9C0J9 RN7SKP282-201ENST00000516824 299 ntBASIC3.08□□□□□ -1.92
BHLHE41Q9C0J9 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.08□□□□□ -1.92
BHLHE41Q9C0J9 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.08□□□□□ -1.92
BHLHE41Q9C0J9 U6.108-201ENST00000637764 58 ntBASIC3.08□□□□□ -1.92
BHLHE41Q9C0J9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
BHLHE41Q9C0J9 AC008555.8-201ENST00000623602 2168 ntBASIC3.08□□□□□ -1.92
BHLHE41Q9C0J9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
BHLHE41Q9C0J9 SNORD68-201ENST00000363214 84 ntBASIC3.07□□□□□ -1.92
BHLHE41Q9C0J9 RNA5SP50-201ENST00000363731 107 ntBASIC3.07□□□□□ -1.92
BHLHE41Q9C0J9 SNORD114-6-201ENST00000364393 72 ntBASIC3.07□□□□□ -1.92
BHLHE41Q9C0J9 RNU6-1164P-201ENST00000364428 107 ntBASIC3.07□□□□□ -1.92
BHLHE41Q9C0J9 MIRLET7F2-201ENST00000385277 83 ntBASIC3.07□□□□□ -1.92
BHLHE41Q9C0J9 MIR1289-1-201ENST00000408836 144 ntBASIC3.07□□□□□ -1.92
BHLHE41Q9C0J9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.07□□□□□ -1.92
BHLHE41Q9C0J9 RNA5SP236-201ENST00000516169 116 ntBASIC3.07□□□□□ -1.92
BHLHE41Q9C0J9 RNA5SP170-201ENST00000517150 101 ntBASIC3.07□□□□□ -1.92
BHLHE41Q9C0J9 AC007536.1-201ENST00000533382 349 ntBASIC3.07□□□□□ -1.92
BHLHE41Q9C0J9 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.07□□□□□ -1.92
BHLHE41Q9C0J9 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.07□□□□□ -1.92
BHLHE41Q9C0J9 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.07□□□□□ -1.92
BHLHE41Q9C0J9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.07□□□□□ -1.92
BHLHE41Q9C0J9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
BHLHE41Q9C0J9 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
BHLHE41Q9C0J9 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
BHLHE41Q9C0J9 RNA5SP267-201ENST00000364893 126 ntBASIC3.06□□□□□ -1.92
BHLHE41Q9C0J9 RNU6-1072P-201ENST00000384703 107 ntBASIC3.06□□□□□ -1.92
BHLHE41Q9C0J9 RNU6-443P-201ENST00000384780 107 ntBASIC3.06□□□□□ -1.92
BHLHE41Q9C0J9 MIR522-201ENST00000385071 87 ntBASIC3.06□□□□□ -1.92
BHLHE41Q9C0J9 MIR634-201ENST00000385208 97 ntBASIC3.06□□□□□ -1.92
BHLHE41Q9C0J9 Z92545.1-201ENST00000411782 234 ntBASIC3.06□□□□□ -1.92
BHLHE41Q9C0J9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
BHLHE41Q9C0J9 AC024995.1-201ENST00000523014 93 ntBASIC3.06□□□□□ -1.92
BHLHE41Q9C0J9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.06□□□□□ -1.92
BHLHE41Q9C0J9 MAPK10-362ENST00000641864 4484 ntBASIC3.06□□□□□ -1.92
BHLHE41Q9C0J9 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
BHLHE41Q9C0J9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.05□□□□□ -1.92
BHLHE41Q9C0J9 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
BHLHE41Q9C0J9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
BHLHE41Q9C0J9 RNU6-1298P-201ENST00000362456 101 ntBASIC3.05□□□□□ -1.92
BHLHE41Q9C0J9 Y_RNA.43-201ENST00000362670 111 ntBASIC3.05□□□□□ -1.92
BHLHE41Q9C0J9 Y_RNA.528-201ENST00000384575 108 ntBASIC3.05□□□□□ -1.92
BHLHE41Q9C0J9 SNORD77.3-201ENST00000391113 65 ntBASIC3.05□□□□□ -1.92
BHLHE41Q9C0J9 NDUFB4P4-201ENST00000404822 243 ntBASIC3.05□□□□□ -1.92
BHLHE41Q9C0J9 SNORA11.2-201ENST00000408318 127 ntBASIC3.05□□□□□ -1.92
BHLHE41Q9C0J9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.05□□□□□ -1.92
BHLHE41Q9C0J9 CST2P1-201ENST00000425770 87 ntBASIC3.05□□□□□ -1.92
BHLHE41Q9C0J9 FTH1P12-201ENST00000432137 551 ntBASIC3.05□□□□□ -1.92
BHLHE41Q9C0J9 RNU6-113P-201ENST00000516653 101 ntBASIC3.05□□□□□ -1.92
BHLHE41Q9C0J9 AC245166.1-201ENST00000521012 253 ntBASIC3.05□□□□□ -1.92
BHLHE41Q9C0J9 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
BHLHE41Q9C0J9 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
BHLHE41Q9C0J9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
BHLHE41Q9C0J9 RNU6-1084P-201ENST00000362498 107 ntBASIC3.04□□□□□ -1.92
BHLHE41Q9C0J9 SNORD14E-201ENST00000364009 85 ntBASIC3.04□□□□□ -1.92
BHLHE41Q9C0J9 AL117342.1-201ENST00000404861 406 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 180.6 ms