Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
UBE2OQ9C0C9 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
UBE2OQ9C0C9 GABRG2-229ENST00000641017 3628 ntBASIC3.48□□□□□ -1.85
UBE2OQ9C0C9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
UBE2OQ9C0C9 SNORA70B-201ENST00000384210 135 ntBASIC3.47□□□□□ -1.85
UBE2OQ9C0C9 MIR570-201ENST00000384917 97 ntBASIC3.47□□□□□ -1.85
UBE2OQ9C0C9 MIR767-201ENST00000390228 109 ntBASIC3.47□□□□□ -1.85
UBE2OQ9C0C9 SNORD72-201ENST00000390994 80 ntBASIC3.47□□□□□ -1.85
UBE2OQ9C0C9 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.47□□□□□ -1.85
UBE2OQ9C0C9 AL109933.2-201ENST00000452651 260 ntBASIC3.47□□□□□ -1.85
UBE2OQ9C0C9 AC021205.2-201ENST00000480069 347 ntBASIC3.47□□□□□ -1.85
UBE2OQ9C0C9 RNU2-34P-201ENST00000516534 121 ntBASIC3.47□□□□□ -1.85
UBE2OQ9C0C9 AP001318.4-201ENST00000616637 121 ntBASIC3.47□□□□□ -1.85
UBE2OQ9C0C9 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
UBE2OQ9C0C9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.47□□□□□ -1.85
UBE2OQ9C0C9 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.46□□□□□ -1.85
UBE2OQ9C0C9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
UBE2OQ9C0C9 Y_RNA.163-201ENST00000363702 113 ntBASIC3.46□□□□□ -1.86
UBE2OQ9C0C9 RNU6-1292P-201ENST00000383856 107 ntBASIC3.46□□□□□ -1.86
UBE2OQ9C0C9 RNU6-756P-201ENST00000383997 107 ntBASIC3.46□□□□□ -1.86
UBE2OQ9C0C9 MIR887-201ENST00000401258 79 ntBASIC3.46□□□□□ -1.86
UBE2OQ9C0C9 RN7SKP220-201ENST00000410611 288 ntBASIC3.46□□□□□ -1.86
UBE2OQ9C0C9 RNA5SP136-201ENST00000410906 107 ntBASIC3.46□□□□□ -1.86
UBE2OQ9C0C9 AL513477.1-202ENST00000417061 214 ntBASIC3.46□□□□□ -1.86
UBE2OQ9C0C9 AL031183.1-201ENST00000457667 207 ntBASIC3.46□□□□□ -1.86
UBE2OQ9C0C9 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.46□□□□□ -1.86
UBE2OQ9C0C9 RNU6-504P-201ENST00000516568 104 ntBASIC3.46□□□□□ -1.86
UBE2OQ9C0C9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.46□□□□□ -1.86
UBE2OQ9C0C9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.46□□□□□ -1.86
UBE2OQ9C0C9 JPX_2.1-201ENST00000614161 69 ntBASIC3.46□□□□□ -1.86
UBE2OQ9C0C9 AC006111.3-201ENST00000622137 383 ntBASIC3.46□□□□□ -1.86
UBE2OQ9C0C9 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
UBE2OQ9C0C9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
UBE2OQ9C0C9 SNORA12.1-201ENST00000390873 148 ntBASIC3.45□□□□□ -1.86
UBE2OQ9C0C9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.45□□□□□ -1.86
UBE2OQ9C0C9 HMGN2P32-201ENST00000444648 269 ntBASIC3.45□□□□□ -1.86
UBE2OQ9C0C9 MRPS17P9-201ENST00000511924 393 ntBASIC3.45□□□□□ -1.86
UBE2OQ9C0C9 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.45□□□□□ -1.86
UBE2OQ9C0C9 AC107294.3-201ENST00000609211 526 ntBASIC3.45□□□□□ -1.86
UBE2OQ9C0C9 MIR1248-201ENST00000629190 106 ntBASIC3.45□□□□□ -1.86
UBE2OQ9C0C9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
UBE2OQ9C0C9 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
UBE2OQ9C0C9 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
UBE2OQ9C0C9 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.44□□□□□ -1.86
UBE2OQ9C0C9 RNU6-486P-201ENST00000363116 107 ntBASIC3.44□□□□□ -1.86
UBE2OQ9C0C9 RNU6-438P-201ENST00000365561 103 ntBASIC3.44□□□□□ -1.86
UBE2OQ9C0C9 AC003685.2-201ENST00000422795 395 ntBASIC3.44□□□□□ -1.86
UBE2OQ9C0C9 SNORA31.1-201ENST00000515993 133 ntBASIC3.44□□□□□ -1.86
UBE2OQ9C0C9 SNORA31.5-201ENST00000516190 133 ntBASIC3.44□□□□□ -1.86
UBE2OQ9C0C9 RNU6-113P-201ENST00000516653 101 ntBASIC3.44□□□□□ -1.86
UBE2OQ9C0C9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.44□□□□□ -1.86
UBE2OQ9C0C9 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
UBE2OQ9C0C9 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.44□□□□□ -1.86
UBE2OQ9C0C9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.44□□□□□ -1.86
UBE2OQ9C0C9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
UBE2OQ9C0C9 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
UBE2OQ9C0C9 MIR622-201ENST00000638396 96 ntBASIC3.44□□□□□ -1.86
UBE2OQ9C0C9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
UBE2OQ9C0C9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
UBE2OQ9C0C9 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
UBE2OQ9C0C9 RNU1-70P-201ENST00000362618 164 ntBASIC3.43□□□□□ -1.86
UBE2OQ9C0C9 RNU6-888P-201ENST00000363010 101 ntBASIC3.43□□□□□ -1.86
UBE2OQ9C0C9 RNU6-294P-201ENST00000364999 102 ntBASIC3.43□□□□□ -1.86
UBE2OQ9C0C9 SNORA51.5-201ENST00000384126 131 ntBASIC3.43□□□□□ -1.86
UBE2OQ9C0C9 SNORD61-201ENST00000384252 73 ntBASIC3.43□□□□□ -1.86
UBE2OQ9C0C9 SNORA51.10-201ENST00000384418 136 ntBASIC3.43□□□□□ -1.86
UBE2OQ9C0C9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
UBE2OQ9C0C9 TRIAP1P1-201ENST00000427062 225 ntBASIC3.43□□□□□ -1.86
UBE2OQ9C0C9 HMGN2P18-201ENST00000450680 270 ntBASIC3.43□□□□□ -1.86
UBE2OQ9C0C9 snoU13.26-201ENST00000459452 105 ntBASIC3.43□□□□□ -1.86
UBE2OQ9C0C9 COX6CP6-201ENST00000490840 228 ntBASIC3.43□□□□□ -1.86
UBE2OQ9C0C9 AC096725.1-201ENST00000514266 313 ntBASIC3.43□□□□□ -1.86
UBE2OQ9C0C9 SCARNA17.1-201ENST00000516211 143 ntBASIC3.43□□□□□ -1.86
UBE2OQ9C0C9 SCARNA17.2-201ENST00000516334 143 ntBASIC3.43□□□□□ -1.86
UBE2OQ9C0C9 SCARNA15-202ENST00000516881 127 ntBASIC3.43□□□□□ -1.86
UBE2OQ9C0C9 RNU6-1096P-201ENST00000517089 102 ntBASIC3.43□□□□□ -1.86
UBE2OQ9C0C9 RNU6-586P-201ENST00000517265 104 ntBASIC3.43□□□□□ -1.86
UBE2OQ9C0C9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.43□□□□□ -1.86
UBE2OQ9C0C9 uc_338.1-201ENST00000612113 180 ntBASIC3.43□□□□□ -1.86
UBE2OQ9C0C9 SCARNA17.4-201ENST00000614296 143 ntBASIC3.43□□□□□ -1.86
UBE2OQ9C0C9 AL035470.1-201ENST00000622571 220 ntBASIC3.43□□□□□ -1.86
UBE2OQ9C0C9 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.42□□□□□ -1.86
UBE2OQ9C0C9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
UBE2OQ9C0C9 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
UBE2OQ9C0C9 RNU1-105P-201ENST00000363470 161 ntBASIC3.42□□□□□ -1.86
UBE2OQ9C0C9 Y_RNA.366-201ENST00000365540 102 ntBASIC3.42□□□□□ -1.86
UBE2OQ9C0C9 RNU6-1083P-201ENST00000384022 107 ntBASIC3.42□□□□□ -1.86
UBE2OQ9C0C9 RNU6-49P-201ENST00000384256 107 ntBASIC3.42□□□□□ -1.86
UBE2OQ9C0C9 SNORD15B-201ENST00000384714 146 ntBASIC3.42□□□□□ -1.86
UBE2OQ9C0C9 MIR548A2-201ENST00000384956 97 ntBASIC3.42□□□□□ -1.86
UBE2OQ9C0C9 RNY4P29-201ENST00000410801 97 ntBASIC3.42□□□□□ -1.86
UBE2OQ9C0C9 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.42□□□□□ -1.86
UBE2OQ9C0C9 AC009414.1-201ENST00000427200 443 ntBASIC3.42□□□□□ -1.86
UBE2OQ9C0C9 RPS29P21-201ENST00000496272 170 ntBASIC3.42□□□□□ -1.86
UBE2OQ9C0C9 RNU1-41P-201ENST00000516161 162 ntBASIC3.42□□□□□ -1.86
UBE2OQ9C0C9 RNU1-48P-201ENST00000516400 162 ntBASIC3.42□□□□□ -1.86
UBE2OQ9C0C9 RNU6-965P-201ENST00000516721 96 ntBASIC3.42□□□□□ -1.86
UBE2OQ9C0C9 RNU6-1149P-201ENST00000516810 97 ntBASIC3.42□□□□□ -1.86
UBE2OQ9C0C9 MIR2276-201ENST00000516886 89 ntBASIC3.42□□□□□ -1.86
UBE2OQ9C0C9 RNU6-1270P-201ENST00000517128 108 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 1749.1 ms