Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AL137792.2-201ENST00000443484 235 ntBASIC-0.3□□□□□ -2.46
TRIM4Q9C037 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.3□□□□□ -2.46
TRIM4Q9C037 UBE2V1P12-201ENST00000503954 474 ntBASIC-0.3□□□□□ -2.46
TRIM4Q9C037 RNU6-107P-201ENST00000516643 102 ntBASIC-0.3□□□□□ -2.46
TRIM4Q9C037 AL157687.1-201ENST00000554853 619 ntBASIC-0.3□□□□□ -2.46
TRIM4Q9C037 AL391834.2-201ENST00000609982 546 ntBASIC-0.3□□□□□ -2.46
TRIM4Q9C037 AP001506.1-201ENST00000615444 211 ntBASIC-0.3□□□□□ -2.46
TRIM4Q9C037 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.3□□□□□ -2.46
TRIM4Q9C037 RNU6-181P-201ENST00000363225 107 ntBASIC-0.31□□□□□ -2.46
TRIM4Q9C037 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.31□□□□□ -2.46
TRIM4Q9C037 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.31□□□□□ -2.46
TRIM4Q9C037 U8.5-201ENST00000364528 136 ntBASIC-0.31□□□□□ -2.46
TRIM4Q9C037 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.31□□□□□ -2.46
TRIM4Q9C037 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.31□□□□□ -2.46
TRIM4Q9C037 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.31□□□□□ -2.46
TRIM4Q9C037 MIR610-201ENST00000385139 96 ntBASIC-0.31□□□□□ -2.46
TRIM4Q9C037 AL590002.1-201ENST00000406554 418 ntBASIC-0.31□□□□□ -2.46
TRIM4Q9C037 MTND1P26-201ENST00000440488 538 ntBASIC-0.31□□□□□ -2.46
TRIM4Q9C037 RNU6-445P-201ENST00000516949 107 ntBASIC-0.31□□□□□ -2.46
TRIM4Q9C037 MTND4P7-201ENST00000523876 130 ntBASIC-0.31□□□□□ -2.46
TRIM4Q9C037 AP003461.1-201ENST00000528866 78 ntBASIC-0.31□□□□□ -2.46
TRIM4Q9C037 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.31□□□□□ -2.46
TRIM4Q9C037 UBL5P4-201ENST00000562584 236 ntBASIC-0.31□□□□□ -2.46
TRIM4Q9C037 MTND1P8-201ENST00000571424 950 ntBASIC-0.31□□□□□ -2.46
TRIM4Q9C037 MIR4771-2-201ENST00000577758 74 ntBASIC-0.31□□□□□ -2.46
TRIM4Q9C037 MIR4771-1-201ENST00000582617 74 ntBASIC-0.31□□□□□ -2.46
TRIM4Q9C037 AC016597.2-201ENST00000613256 341 ntBASIC-0.31□□□□□ -2.46
TRIM4Q9C037 AC006504.8-201ENST00000621046 635 ntBASIC-0.31□□□□□ -2.46
TRIM4Q9C037 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.31□□□□□ -2.46
TRIM4Q9C037 MIR1295B-201ENST00000636144 60 ntBASIC-0.31□□□□□ -2.46
TRIM4Q9C037 SNORD50.1-201ENST00000362987 71 ntBASIC-0.32□□□□□ -2.46
TRIM4Q9C037 RNU6-280P-201ENST00000364145 104 ntBASIC-0.32□□□□□ -2.46
TRIM4Q9C037 RNU6-580P-201ENST00000365159 107 ntBASIC-0.32□□□□□ -2.46
TRIM4Q9C037 RNU6-117P-201ENST00000365415 107 ntBASIC-0.32□□□□□ -2.46
TRIM4Q9C037 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.32□□□□□ -2.46
TRIM4Q9C037 RNU6-136P-201ENST00000384663 107 ntBASIC-0.32□□□□□ -2.46
TRIM4Q9C037 SNORA32.3-201ENST00000384772 121 ntBASIC-0.32□□□□□ -2.46
TRIM4Q9C037 MIR643-201ENST00000385267 97 ntBASIC-0.32□□□□□ -2.46
TRIM4Q9C037 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
TRIM4Q9C037 SNORA40.3-201ENST00000390964 122 ntBASIC-0.32□□□□□ -2.46
TRIM4Q9C037 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.32□□□□□ -2.46
TRIM4Q9C037 MTCYBP8-201ENST00000422855 651 ntBASIC-0.32□□□□□ -2.46
TRIM4Q9C037 AC133104.1-201ENST00000429100 218 ntBASIC-0.32□□□□□ -2.46
TRIM4Q9C037 MTND4P32-201ENST00000437189 1237 ntBASIC-0.32□□□□□ -2.46
TRIM4Q9C037 AL356010.1-201ENST00000456364 102 ntBASIC-0.32□□□□□ -2.46
TRIM4Q9C037 RNU7-56P-201ENST00000458744 62 ntBASIC-0.32□□□□□ -2.46
TRIM4Q9C037 AC093303.1-201ENST00000514549 295 ntBASIC-0.32□□□□□ -2.46
TRIM4Q9C037 RNU2-12P-201ENST00000517216 168 ntBASIC-0.32□□□□□ -2.46
TRIM4Q9C037 AL355375.2-201ENST00000574825 175 ntBASIC-0.32□□□□□ -2.46
TRIM4Q9C037 MIR4762-201ENST00000585261 75 ntBASIC-0.32□□□□□ -2.46
TRIM4Q9C037 AC087685.1-201ENST00000587507 141 ntBASIC-0.32□□□□□ -2.46
TRIM4Q9C037 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.32□□□□□ -2.46
TRIM4Q9C037 AF250324.2-201ENST00000608299 610 ntBASIC-0.32□□□□□ -2.46
TRIM4Q9C037 AL591926.4-201ENST00000616895 298 ntBASIC-0.32□□□□□ -2.46
TRIM4Q9C037 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.33□□□□□ -2.46
TRIM4Q9C037 RNU6-396P-201ENST00000365369 105 ntBASIC-0.33□□□□□ -2.46
TRIM4Q9C037 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.33□□□□□ -2.46
TRIM4Q9C037 MIR145-201ENST00000384967 88 ntBASIC-0.33□□□□□ -2.46
TRIM4Q9C037 RNU6-159P-201ENST00000391080 106 ntBASIC-0.33□□□□□ -2.46
TRIM4Q9C037 SNORD100-201ENST00000408573 76 ntBASIC-0.33□□□□□ -2.46
TRIM4Q9C037 BX295541.1-201ENST00000417774 250 ntBASIC-0.33□□□□□ -2.46
TRIM4Q9C037 MTCO2P11-201ENST00000431069 680 ntBASIC-0.33□□□□□ -2.46
TRIM4Q9C037 AC079354.2-201ENST00000453523 154 ntBASIC-0.33□□□□□ -2.46
TRIM4Q9C037 AL033528.1-201ENST00000453780 140 ntBASIC-0.33□□□□□ -2.46
TRIM4Q9C037 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.33□□□□□ -2.46
TRIM4Q9C037 AL136370.1-201ENST00000608166 691 ntBASIC-0.33□□□□□ -2.46
TRIM4Q9C037 AC009248.2-201ENST00000619826 254 ntBASIC-0.33□□□□□ -2.46
TRIM4Q9C037 AC127459.3-201ENST00000624328 466 ntBASIC-0.33□□□□□ -2.46
TRIM4Q9C037 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.33□□□□□ -2.46
TRIM4Q9C037 MIR198-201ENST00000637333 62 ntBASIC-0.33□□□□□ -2.46
TRIM4Q9C037 SNORD45.3-201ENST00000363836 72 ntBASIC-0.34□□□□□ -2.46
TRIM4Q9C037 RNU6-933P-201ENST00000384424 107 ntBASIC-0.34□□□□□ -2.46
TRIM4Q9C037 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.34□□□□□ -2.46
TRIM4Q9C037 RNU6-541P-201ENST00000384709 110 ntBASIC-0.34□□□□□ -2.46
TRIM4Q9C037 RNA5SP118-201ENST00000410385 109 ntBASIC-0.34□□□□□ -2.46
TRIM4Q9C037 RNU2-59P-201ENST00000410482 191 ntBASIC-0.34□□□□□ -2.46
TRIM4Q9C037 MTCO1P29-201ENST00000496868 288 ntBASIC-0.34□□□□□ -2.46
TRIM4Q9C037 RNU6-189P-201ENST00000516120 101 ntBASIC-0.34□□□□□ -2.46
TRIM4Q9C037 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-0.34□□□□□ -2.46
TRIM4Q9C037 MIR4676-201ENST00000583078 72 ntBASIC-0.34□□□□□ -2.46
TRIM4Q9C037 AC008536.2-201ENST00000607284 349 ntBASIC-0.34□□□□□ -2.46
TRIM4Q9C037 AL357078.3-201ENST00000607528 618 ntBASIC-0.34□□□□□ -2.46
TRIM4Q9C037 MTND5P32-201ENST00000560711 1802 ntBASIC-0.34□□□□□ -2.46
TRIM4Q9C037 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.35□□□□□ -2.47
TRIM4Q9C037 MIR377-201ENST00000362145 69 ntBASIC-0.35□□□□□ -2.47
TRIM4Q9C037 RNY3P5-201ENST00000384127 102 ntBASIC-0.35□□□□□ -2.47
TRIM4Q9C037 MTCYBP4-201ENST00000401524 249 ntBASIC-0.35□□□□□ -2.47
TRIM4Q9C037 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.35□□□□□ -2.47
TRIM4Q9C037 RPL30P16-201ENST00000419341 429 ntBASIC-0.35□□□□□ -2.47
TRIM4Q9C037 MTATP6P23-201ENST00000440153 476 ntBASIC-0.35□□□□□ -2.47
TRIM4Q9C037 MTND4P19-201ENST00000446659 478 ntBASIC-0.35□□□□□ -2.47
TRIM4Q9C037 AC074198.2-201ENST00000508153 258 ntBASIC-0.35□□□□□ -2.47
TRIM4Q9C037 RNU6-320P-201ENST00000516511 106 ntBASIC-0.35□□□□□ -2.47
TRIM4Q9C037 SNORA18.6-201ENST00000516792 115 ntBASIC-0.35□□□□□ -2.47
TRIM4Q9C037 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.35□□□□□ -2.47
TRIM4Q9C037 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.35□□□□□ -2.47
TRIM4Q9C037 AC092447.9-201ENST00000603395 144 ntBASIC-0.35□□□□□ -2.47
TRIM4Q9C037 AL355297.3-201ENST00000604082 446 ntBASIC-0.35□□□□□ -2.47
TRIM4Q9C037 AC010608.3-201ENST00000625048 527 ntBASIC-0.35□□□□□ -2.47
TRIM4Q9C037 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms