Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 RNU6-917P-201ENST00000516294 104 ntBASIC0.94□□□□□ -2.26
HDHD3Q9BSH5 RNU6-1291P-201ENST00000516591 104 ntBASIC0.94□□□□□ -2.26
HDHD3Q9BSH5 RNU7-28P-201ENST00000516759 62 ntBASIC0.94□□□□□ -2.26
HDHD3Q9BSH5 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.94□□□□□ -2.26
HDHD3Q9BSH5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.94□□□□□ -2.26
HDHD3Q9BSH5 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.94□□□□□ -2.26
HDHD3Q9BSH5 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
HDHD3Q9BSH5 SNORD81.1-201ENST00000363064 77 ntBASIC0.93□□□□□ -2.26
HDHD3Q9BSH5 RNU4-73P-201ENST00000363164 141 ntBASIC0.93□□□□□ -2.26
HDHD3Q9BSH5 SNORA7.1-201ENST00000363750 139 ntBASIC0.93□□□□□ -2.26
HDHD3Q9BSH5 Y_RNA.267-201ENST00000364679 109 ntBASIC0.93□□□□□ -2.26
HDHD3Q9BSH5 Y_RNA.356-201ENST00000365475 113 ntBASIC0.93□□□□□ -2.26
HDHD3Q9BSH5 Y_RNA.395-201ENST00000383945 109 ntBASIC0.93□□□□□ -2.26
HDHD3Q9BSH5 Y_RNA.428-201ENST00000384078 102 ntBASIC0.93□□□□□ -2.26
HDHD3Q9BSH5 Y_RNA.458-201ENST00000384240 102 ntBASIC0.93□□□□□ -2.26
HDHD3Q9BSH5 RNU6-376P-201ENST00000384731 106 ntBASIC0.93□□□□□ -2.26
HDHD3Q9BSH5 MIR562-201ENST00000384894 95 ntBASIC0.93□□□□□ -2.26
HDHD3Q9BSH5 MIR520G-201ENST00000385064 90 ntBASIC0.93□□□□□ -2.26
HDHD3Q9BSH5 MTCO2P27-201ENST00000420740 428 ntBASIC0.93□□□□□ -2.26
HDHD3Q9BSH5 RPS4XP11-201ENST00000446897 772 ntBASIC0.93□□□□□ -2.26
HDHD3Q9BSH5 RNU6-1096P-201ENST00000517089 102 ntBASIC0.93□□□□□ -2.26
HDHD3Q9BSH5 SNORD116.3-201ENST00000517176 78 ntBASIC0.93□□□□□ -2.26
HDHD3Q9BSH5 RPL21P9-201ENST00000556149 474 ntBASIC0.93□□□□□ -2.26
HDHD3Q9BSH5 AC006600.1-201ENST00000572529 153 ntBASIC0.93□□□□□ -2.26
HDHD3Q9BSH5 AC005176.2-201ENST00000596933 147 ntBASIC0.93□□□□□ -2.26
HDHD3Q9BSH5 SNORA28-201ENST00000606769 126 ntBASIC0.93□□□□□ -2.26
HDHD3Q9BSH5 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.93□□□□□ -2.26
HDHD3Q9BSH5 SNORD3E-202ENST00000627253 216 ntBASIC0.93□□□□□ -2.26
HDHD3Q9BSH5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
HDHD3Q9BSH5 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.92□□□□□ -2.26
HDHD3Q9BSH5 RNA5SP327-201ENST00000362494 101 ntBASIC0.92□□□□□ -2.26
HDHD3Q9BSH5 RNY1P14-201ENST00000384426 108 ntBASIC0.92□□□□□ -2.26
HDHD3Q9BSH5 RNU6-1065P-201ENST00000384513 106 ntBASIC0.92□□□□□ -2.26
HDHD3Q9BSH5 RNU6-939P-201ENST00000384634 107 ntBASIC0.92□□□□□ -2.26
HDHD3Q9BSH5 Y_RNA.579-201ENST00000390939 94 ntBASIC0.92□□□□□ -2.26
HDHD3Q9BSH5 RNU11-5P-201ENST00000391216 129 ntBASIC0.92□□□□□ -2.26
HDHD3Q9BSH5 RNA5SP482-201ENST00000391269 118 ntBASIC0.92□□□□□ -2.26
HDHD3Q9BSH5 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.92□□□□□ -2.26
HDHD3Q9BSH5 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.92□□□□□ -2.26
HDHD3Q9BSH5 RPEP5-201ENST00000441137 268 ntBASIC0.92□□□□□ -2.26
HDHD3Q9BSH5 AC009474.2-201ENST00000451383 136 ntBASIC0.92□□□□□ -2.26
HDHD3Q9BSH5 AC010655.3-201ENST00000478818 450 ntBASIC0.92□□□□□ -2.26
HDHD3Q9BSH5 SNORA40.14-201ENST00000516543 86 ntBASIC0.92□□□□□ -2.26
HDHD3Q9BSH5 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.92□□□□□ -2.26
HDHD3Q9BSH5 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
HDHD3Q9BSH5 MIR4778-201ENST00000577635 80 ntBASIC0.92□□□□□ -2.26
HDHD3Q9BSH5 MIR4795-201ENST00000584182 89 ntBASIC0.92□□□□□ -2.26
HDHD3Q9BSH5 AC092447.9-201ENST00000603395 144 ntBASIC0.92□□□□□ -2.26
HDHD3Q9BSH5 AL513534.2-201ENST00000603836 250 ntBASIC0.92□□□□□ -2.26
HDHD3Q9BSH5 AC004832.4-201ENST00000608952 331 ntBASIC0.92□□□□□ -2.26
HDHD3Q9BSH5 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.92□□□□□ -2.26
HDHD3Q9BSH5 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.92□□□□□ -2.26
HDHD3Q9BSH5 AL606534.2-204ENST00000635008 178 ntBASIC0.92□□□□□ -2.26
HDHD3Q9BSH5 AL442644.1-201ENST00000454390 3105 ntBASIC0.92□□□□□ -2.26
HDHD3Q9BSH5 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.91□□□□□ -2.26
HDHD3Q9BSH5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.91□□□□□ -2.26
HDHD3Q9BSH5 Y_RNA.80-201ENST00000362996 102 ntBASIC0.91□□□□□ -2.26
HDHD3Q9BSH5 Y_RNA.112-201ENST00000363250 102 ntBASIC0.91□□□□□ -2.26
HDHD3Q9BSH5 Y_RNA.197-201ENST00000364004 102 ntBASIC0.91□□□□□ -2.26
HDHD3Q9BSH5 RNU4-76P-201ENST00000364509 141 ntBASIC0.91□□□□□ -2.26
HDHD3Q9BSH5 SNORD42.2-201ENST00000365570 69 ntBASIC0.91□□□□□ -2.26
HDHD3Q9BSH5 Y_RNA.485-201ENST00000384395 102 ntBASIC0.91□□□□□ -2.26
HDHD3Q9BSH5 Y_RNA.509-201ENST00000384506 99 ntBASIC0.91□□□□□ -2.26
HDHD3Q9BSH5 RNU6-136P-201ENST00000384663 107 ntBASIC0.91□□□□□ -2.26
HDHD3Q9BSH5 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.91□□□□□ -2.26
HDHD3Q9BSH5 DYNLT3P2-201ENST00000442517 295 ntBASIC0.91□□□□□ -2.26
HDHD3Q9BSH5 AL163540.1-201ENST00000485382 386 ntBASIC0.91□□□□□ -2.26
HDHD3Q9BSH5 Y_RNA.661-201ENST00000516003 99 ntBASIC0.91□□□□□ -2.26
HDHD3Q9BSH5 RNU6-976P-201ENST00000516086 111 ntBASIC0.91□□□□□ -2.26
HDHD3Q9BSH5 AC019288.1-201ENST00000557918 224 ntBASIC0.91□□□□□ -2.26
HDHD3Q9BSH5 MIR4762-201ENST00000585261 75 ntBASIC0.91□□□□□ -2.26
HDHD3Q9BSH5 AL080274.1-201ENST00000605565 220 ntBASIC0.91□□□□□ -2.26
HDHD3Q9BSH5 AL133255.1-201ENST00000606374 441 ntBASIC0.91□□□□□ -2.26
HDHD3Q9BSH5 AL353770.2-201ENST00000620024 78 ntBASIC0.91□□□□□ -2.26
HDHD3Q9BSH5 uc_338.22-201ENST00000622722 187 ntBASIC0.91□□□□□ -2.26
HDHD3Q9BSH5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.91□□□□□ -2.26
HDHD3Q9BSH5 RNU6-199P-201ENST00000362954 107 ntBASIC0.9□□□□□ -2.27
HDHD3Q9BSH5 U8.5-201ENST00000364528 136 ntBASIC0.9□□□□□ -2.27
HDHD3Q9BSH5 Y_RNA.265-201ENST00000364677 108 ntBASIC0.9□□□□□ -2.27
HDHD3Q9BSH5 Y_RNA.462-201ENST00000384268 102 ntBASIC0.9□□□□□ -2.27
HDHD3Q9BSH5 MIR526A1-201ENST00000384897 85 ntBASIC0.9□□□□□ -2.27
HDHD3Q9BSH5 SNORA11.2-201ENST00000408318 127 ntBASIC0.9□□□□□ -2.27
HDHD3Q9BSH5 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.9□□□□□ -2.27
HDHD3Q9BSH5 AC236972.2-201ENST00000434979 310 ntBASIC0.9□□□□□ -2.27
HDHD3Q9BSH5 AC093850.1-201ENST00000454121 251 ntBASIC0.9□□□□□ -2.27
HDHD3Q9BSH5 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.9□□□□□ -2.27
HDHD3Q9BSH5 AL133373.1-201ENST00000497098 94 ntBASIC0.9□□□□□ -2.27
HDHD3Q9BSH5 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.9□□□□□ -2.27
HDHD3Q9BSH5 RNU6-155P-201ENST00000516347 100 ntBASIC0.9□□□□□ -2.27
HDHD3Q9BSH5 RNU2-56P-201ENST00000516826 190 ntBASIC0.9□□□□□ -2.27
HDHD3Q9BSH5 RNU6-1116P-201ENST00000517269 99 ntBASIC0.9□□□□□ -2.27
HDHD3Q9BSH5 AC090049.2-201ENST00000550377 109 ntBASIC0.9□□□□□ -2.27
HDHD3Q9BSH5 AL157834.3-201ENST00000615543 103 ntBASIC0.9□□□□□ -2.27
HDHD3Q9BSH5 AC106754.2-201ENST00000623006 233 ntBASIC0.9□□□□□ -2.27
HDHD3Q9BSH5 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
HDHD3Q9BSH5 RNU6-833P-201ENST00000363486 107 ntBASIC0.89□□□□□ -2.27
HDHD3Q9BSH5 RNU6-1175P-201ENST00000365200 107 ntBASIC0.89□□□□□ -2.27
HDHD3Q9BSH5 MIR628-201ENST00000385229 95 ntBASIC0.89□□□□□ -2.27
HDHD3Q9BSH5 MIR618-201ENST00000385287 98 ntBASIC0.89□□□□□ -2.27
HDHD3Q9BSH5 RNU6-130P-201ENST00000411112 103 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 179.8 ms