Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 RNU6-823P-201ENST00000391042 103 ntBASIC1.62□□□□□ -2.15
RAD9AQ99638 AC005534.2-201ENST00000431047 433 ntBASIC1.62□□□□□ -2.15
RAD9AQ99638 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.62□□□□□ -2.15
RAD9AQ99638 AC022616.4-201ENST00000522985 181 ntBASIC1.62□□□□□ -2.15
RAD9AQ99638 AL021879.1-201ENST00000611756 288 ntBASIC1.62□□□□□ -2.15
RAD9AQ99638 Y_RNA.202-201ENST00000364083 110 ntBASIC1.61□□□□□ -2.15
RAD9AQ99638 Y_RNA.389-201ENST00000383924 113 ntBASIC1.61□□□□□ -2.15
RAD9AQ99638 RNU6-1227P-201ENST00000383981 107 ntBASIC1.61□□□□□ -2.15
RAD9AQ99638 Y_RNA.446-201ENST00000384178 104 ntBASIC1.61□□□□□ -2.15
RAD9AQ99638 Y_RNA.551-201ENST00000384661 102 ntBASIC1.61□□□□□ -2.15
RAD9AQ99638 Y_RNA.570-201ENST00000384750 101 ntBASIC1.61□□□□□ -2.15
RAD9AQ99638 MIR873-201ENST00000401120 77 ntBASIC1.61□□□□□ -2.15
RAD9AQ99638 RNU6-101P-201ENST00000410323 104 ntBASIC1.61□□□□□ -2.15
RAD9AQ99638 RNU5A-5P-201ENST00000411054 116 ntBASIC1.61□□□□□ -2.15
RAD9AQ99638 AC073910.1-201ENST00000445047 438 ntBASIC1.61□□□□□ -2.15
RAD9AQ99638 RNU1-98P-201ENST00000458992 160 ntBASIC1.61□□□□□ -2.15
RAD9AQ99638 RPS26P45-201ENST00000471748 340 ntBASIC1.61□□□□□ -2.15
RAD9AQ99638 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.61□□□□□ -2.15
RAD9AQ99638 AC025465.3-201ENST00000510570 311 ntBASIC1.61□□□□□ -2.15
RAD9AQ99638 AC097462.1-201ENST00000514125 324 ntBASIC1.61□□□□□ -2.15
RAD9AQ99638 RNU6-155P-201ENST00000516347 100 ntBASIC1.61□□□□□ -2.15
RAD9AQ99638 Y_RNA.713-201ENST00000517013 96 ntBASIC1.61□□□□□ -2.15
RAD9AQ99638 Y_RNA.721-201ENST00000517207 102 ntBASIC1.61□□□□□ -2.15
RAD9AQ99638 AC022441.3-201ENST00000605737 136 ntBASIC1.61□□□□□ -2.15
RAD9AQ99638 PART1_1.1-201ENST00000611761 217 ntBASIC1.61□□□□□ -2.15
RAD9AQ99638 MIR8074-201ENST00000615081 81 ntBASIC1.61□□□□□ -2.15
RAD9AQ99638 AC091895.1-201ENST00000624494 256 ntBASIC1.61□□□□□ -2.15
RAD9AQ99638 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.61□□□□□ -2.15
RAD9AQ99638 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
RAD9AQ99638 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
RAD9AQ99638 RNU1-22P-201ENST00000363334 158 ntBASIC1.6□□□□□ -2.15
RAD9AQ99638 Y_RNA.124-201ENST00000363339 93 ntBASIC1.6□□□□□ -2.15
RAD9AQ99638 Y_RNA.143-201ENST00000363520 106 ntBASIC1.6□□□□□ -2.15
RAD9AQ99638 RNU6-414P-201ENST00000363705 104 ntBASIC1.6□□□□□ -2.15
RAD9AQ99638 AC117470.1-201ENST00000381974 330 ntBASIC1.6□□□□□ -2.15
RAD9AQ99638 RNU6-338P-201ENST00000383888 105 ntBASIC1.6□□□□□ -2.15
RAD9AQ99638 Y_RNA.462-201ENST00000384268 102 ntBASIC1.6□□□□□ -2.15
RAD9AQ99638 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
RAD9AQ99638 RNU6-130P-201ENST00000411112 103 ntBASIC1.6□□□□□ -2.15
RAD9AQ99638 RNU6-1199P-201ENST00000411249 104 ntBASIC1.6□□□□□ -2.15
RAD9AQ99638 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.6□□□□□ -2.15
RAD9AQ99638 AL354695.1-201ENST00000427935 228 ntBASIC1.6□□□□□ -2.15
RAD9AQ99638 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.6□□□□□ -2.15
RAD9AQ99638 RNA5SP220-201ENST00000516298 104 ntBASIC1.6□□□□□ -2.15
RAD9AQ99638 RNU6-966P-201ENST00000516479 104 ntBASIC1.6□□□□□ -2.15
RAD9AQ99638 Y_RNA.715-201ENST00000517082 110 ntBASIC1.6□□□□□ -2.15
RAD9AQ99638 RNU7-172P-201ENST00000517125 64 ntBASIC1.6□□□□□ -2.15
RAD9AQ99638 MIR4423-201ENST00000580922 80 ntBASIC1.6□□□□□ -2.15
RAD9AQ99638 AL078603.1-201ENST00000603824 313 ntBASIC1.6□□□□□ -2.15
RAD9AQ99638 AC040896.1-201ENST00000613819 479 ntBASIC1.6□□□□□ -2.15
RAD9AQ99638 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.6□□□□□ -2.15
RAD9AQ99638 SNORD114-7-201ENST00000362520 77 ntBASIC1.59□□□□□ -2.15
RAD9AQ99638 Y_RNA.158-201ENST00000363651 101 ntBASIC1.59□□□□□ -2.15
RAD9AQ99638 RNU6-324P-201ENST00000363957 106 ntBASIC1.59□□□□□ -2.15
RAD9AQ99638 Y_RNA.361-201ENST00000365515 120 ntBASIC1.59□□□□□ -2.15
RAD9AQ99638 SNORA63.7-201ENST00000365579 123 ntBASIC1.59□□□□□ -2.15
RAD9AQ99638 RNU6-439P-201ENST00000384188 106 ntBASIC1.59□□□□□ -2.15
RAD9AQ99638 RNU6-937P-201ENST00000384325 106 ntBASIC1.59□□□□□ -2.15
RAD9AQ99638 RNA5SP109-201ENST00000391010 116 ntBASIC1.59□□□□□ -2.15
RAD9AQ99638 RNU11-5P-201ENST00000391216 129 ntBASIC1.59□□□□□ -2.15
RAD9AQ99638 AL031003.1-201ENST00000404229 172 ntBASIC1.59□□□□□ -2.15
RAD9AQ99638 AL606517.2-201ENST00000442855 241 ntBASIC1.59□□□□□ -2.15
RAD9AQ99638 RNU7-94P-201ENST00000459576 63 ntBASIC1.59□□□□□ -2.15
RAD9AQ99638 RPS26P55-201ENST00000471178 356 ntBASIC1.59□□□□□ -2.15
RAD9AQ99638 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.59□□□□□ -2.15
RAD9AQ99638 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
RAD9AQ99638 AC136443.5-201ENST00000603741 370 ntBASIC1.59□□□□□ -2.15
RAD9AQ99638 AC073413.2-201ENST00000604332 360 ntBASIC1.59□□□□□ -2.15
RAD9AQ99638 AC022140.2-201ENST00000623500 188 ntBASIC1.59□□□□□ -2.15
RAD9AQ99638 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
RAD9AQ99638 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RAD9AQ99638 SNORA4.2-201ENST00000365313 147 ntBASIC1.58□□□□□ -2.16
RAD9AQ99638 RNU6-53P-201ENST00000365367 106 ntBASIC1.58□□□□□ -2.16
RAD9AQ99638 SNORD114-22-201ENST00000365423 72 ntBASIC1.58□□□□□ -2.16
RAD9AQ99638 SNORD63-201ENST00000384262 68 ntBASIC1.58□□□□□ -2.16
RAD9AQ99638 RNU6-950P-201ENST00000384651 107 ntBASIC1.58□□□□□ -2.16
RAD9AQ99638 RNU6-997P-201ENST00000384725 107 ntBASIC1.58□□□□□ -2.16
RAD9AQ99638 MIR1252-201ENST00000408861 65 ntBASIC1.58□□□□□ -2.16
RAD9AQ99638 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.58□□□□□ -2.16
RAD9AQ99638 AL390729.2-201ENST00000416137 156 ntBASIC1.58□□□□□ -2.16
RAD9AQ99638 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.58□□□□□ -2.16
RAD9AQ99638 RPS27P1-201ENST00000450552 247 ntBASIC1.58□□□□□ -2.16
RAD9AQ99638 SNORA70.12-201ENST00000516084 153 ntBASIC1.58□□□□□ -2.16
RAD9AQ99638 RNU6-397P-201ENST00000516226 104 ntBASIC1.58□□□□□ -2.16
RAD9AQ99638 RNU7-110P-201ENST00000516891 62 ntBASIC1.58□□□□□ -2.16
RAD9AQ99638 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.58□□□□□ -2.16
RAD9AQ99638 AC022217.4-201ENST00000604389 163 ntBASIC1.58□□□□□ -2.16
RAD9AQ99638 AC011373.1-201ENST00000607270 237 ntBASIC1.58□□□□□ -2.16
RAD9AQ99638 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.58□□□□□ -2.16
RAD9AQ99638 AC127459.3-201ENST00000624328 466 ntBASIC1.58□□□□□ -2.16
RAD9AQ99638 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.58□□□□□ -2.16
RAD9AQ99638 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
RAD9AQ99638 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.57□□□□□ -2.16
RAD9AQ99638 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RAD9AQ99638 RNA5SP363-201ENST00000365072 115 ntBASIC1.57□□□□□ -2.16
RAD9AQ99638 Y_RNA.331-201ENST00000365267 102 ntBASIC1.57□□□□□ -2.16
RAD9AQ99638 SNORA33.2-201ENST00000365413 134 ntBASIC1.57□□□□□ -2.16
RAD9AQ99638 RNU6-505P-201ENST00000384427 107 ntBASIC1.57□□□□□ -2.16
RAD9AQ99638 Y_RNA.527-201ENST00000384573 102 ntBASIC1.57□□□□□ -2.16
RAD9AQ99638 COX6CP10-201ENST00000416832 224 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms