Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 Y_RNA.526-201ENST00000384572 110 ntBASIC1.5□□□□□ -2.17
CDCA3Q99618 RNU6-136P-201ENST00000384663 107 ntBASIC1.5□□□□□ -2.17
CDCA3Q99618 MIR30A-201ENST00000385092 71 ntBASIC1.5□□□□□ -2.17
CDCA3Q99618 Y_RNA.645-201ENST00000391229 102 ntBASIC1.5□□□□□ -2.17
CDCA3Q99618 MIR873-201ENST00000401120 77 ntBASIC1.5□□□□□ -2.17
CDCA3Q99618 RNU6-1199P-201ENST00000411249 104 ntBASIC1.5□□□□□ -2.17
CDCA3Q99618 U8.20-201ENST00000459445 131 ntBASIC1.5□□□□□ -2.17
CDCA3Q99618 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.5□□□□□ -2.17
CDCA3Q99618 AC093852.1-201ENST00000503587 266 ntBASIC1.5□□□□□ -2.17
CDCA3Q99618 AC025465.3-201ENST00000510570 311 ntBASIC1.5□□□□□ -2.17
CDCA3Q99618 RNU6-475P-201ENST00000516073 104 ntBASIC1.5□□□□□ -2.17
CDCA3Q99618 RNU6-155P-201ENST00000516347 100 ntBASIC1.5□□□□□ -2.17
CDCA3Q99618 RNU6-966P-201ENST00000516479 104 ntBASIC1.5□□□□□ -2.17
CDCA3Q99618 SNORA44.1-201ENST00000517031 108 ntBASIC1.5□□□□□ -2.17
CDCA3Q99618 RNU6-988P-201ENST00000519081 107 ntBASIC1.5□□□□□ -2.17
CDCA3Q99618 RPL21P9-201ENST00000556149 474 ntBASIC1.5□□□□□ -2.17
CDCA3Q99618 MIR4285-201ENST00000581001 85 ntBASIC1.5□□□□□ -2.17
CDCA3Q99618 AL390123.1-201ENST00000603216 237 ntBASIC1.5□□□□□ -2.17
CDCA3Q99618 AL021879.1-201ENST00000611756 288 ntBASIC1.5□□□□□ -2.17
CDCA3Q99618 AC127459.3-201ENST00000624328 466 ntBASIC1.5□□□□□ -2.17
CDCA3Q99618 AC095038.3-201ENST00000634439 195 ntBASIC1.5□□□□□ -2.17
CDCA3Q99618 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CDCA3Q99618 AC100821.1-201ENST00000523153 2479 ntBASIC1.49□□□□□ -2.17
CDCA3Q99618 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.49□□□□□ -2.17
CDCA3Q99618 Y_RNA.143-201ENST00000363520 106 ntBASIC1.49□□□□□ -2.17
CDCA3Q99618 RNU4-50P-201ENST00000364361 141 ntBASIC1.49□□□□□ -2.17
CDCA3Q99618 RNU6-1175P-201ENST00000365200 107 ntBASIC1.49□□□□□ -2.17
CDCA3Q99618 RNU6-53P-201ENST00000365367 106 ntBASIC1.49□□□□□ -2.17
CDCA3Q99618 SNORA22B-201ENST00000383876 138 ntBASIC1.49□□□□□ -2.17
CDCA3Q99618 Y_RNA.439-201ENST00000384119 94 ntBASIC1.49□□□□□ -2.17
CDCA3Q99618 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
CDCA3Q99618 MIR1267-201ENST00000408723 78 ntBASIC1.49□□□□□ -2.17
CDCA3Q99618 AC245047.3-201ENST00000429428 127 ntBASIC1.49□□□□□ -2.17
CDCA3Q99618 FTH1P12-201ENST00000432137 551 ntBASIC1.49□□□□□ -2.17
CDCA3Q99618 SUMO1P2-201ENST00000452524 304 ntBASIC1.49□□□□□ -2.17
CDCA3Q99618 RNU6-63P-201ENST00000516690 95 ntBASIC1.49□□□□□ -2.17
CDCA3Q99618 Y_RNA.701-201ENST00000516812 110 ntBASIC1.49□□□□□ -2.17
CDCA3Q99618 MIR4709-201ENST00000577272 72 ntBASIC1.49□□□□□ -2.17
CDCA3Q99618 AL929325.1-201ENST00000603096 117 ntBASIC1.49□□□□□ -2.17
CDCA3Q99618 AC124312.5-201ENST00000604451 268 ntBASIC1.49□□□□□ -2.17
CDCA3Q99618 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.49□□□□□ -2.17
CDCA3Q99618 AC018630.2-201ENST00000534866 2403 ntBASIC1.49□□□□□ -2.17
CDCA3Q99618 MIR424-201ENST00000362227 98 ntBASIC1.48□□□□□ -2.17
CDCA3Q99618 Y_RNA.216-201ENST00000364205 93 ntBASIC1.48□□□□□ -2.17
CDCA3Q99618 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.48□□□□□ -2.17
CDCA3Q99618 RNU6-203P-201ENST00000384038 104 ntBASIC1.48□□□□□ -2.17
CDCA3Q99618 RNU6-376P-201ENST00000384731 106 ntBASIC1.48□□□□□ -2.17
CDCA3Q99618 RNU6-440P-201ENST00000390882 105 ntBASIC1.48□□□□□ -2.17
CDCA3Q99618 MRPL42P3-201ENST00000401492 326 ntBASIC1.48□□□□□ -2.17
CDCA3Q99618 AL031003.1-201ENST00000404229 172 ntBASIC1.48□□□□□ -2.17
CDCA3Q99618 MIR548P-201ENST00000408336 84 ntBASIC1.48□□□□□ -2.17
CDCA3Q99618 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.48□□□□□ -2.17
CDCA3Q99618 RPEP5-201ENST00000441137 268 ntBASIC1.48□□□□□ -2.17
CDCA3Q99618 JTBP1-201ENST00000441314 247 ntBASIC1.48□□□□□ -2.17
CDCA3Q99618 SNRPGP13-201ENST00000442212 177 ntBASIC1.48□□□□□ -2.17
CDCA3Q99618 AC005908.1-201ENST00000468701 347 ntBASIC1.48□□□□□ -2.17
CDCA3Q99618 RPS26P55-201ENST00000471178 356 ntBASIC1.48□□□□□ -2.17
CDCA3Q99618 SNORA31.10-201ENST00000516482 106 ntBASIC1.48□□□□□ -2.17
CDCA3Q99618 SNORA77B-201ENST00000578179 125 ntBASIC1.48□□□□□ -2.17
CDCA3Q99618 MIR3171-201ENST00000584270 74 ntBASIC1.48□□□□□ -2.17
CDCA3Q99618 AC104695.3-201ENST00000604052 296 ntBASIC1.48□□□□□ -2.17
CDCA3Q99618 AC022441.3-201ENST00000605737 136 ntBASIC1.48□□□□□ -2.17
CDCA3Q99618 RMST_2.1-201ENST00000617263 136 ntBASIC1.48□□□□□ -2.17
CDCA3Q99618 MIR8054-201ENST00000620877 86 ntBASIC1.48□□□□□ -2.17
CDCA3Q99618 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.48□□□□□ -2.17
CDCA3Q99618 MIR6079-201ENST00000635807 62 ntBASIC1.48□□□□□ -2.17
CDCA3Q99618 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CDCA3Q99618 SNORD114-22-201ENST00000365423 72 ntBASIC1.47□□□□□ -2.17
CDCA3Q99618 RNU6-937P-201ENST00000384325 106 ntBASIC1.47□□□□□ -2.17
CDCA3Q99618 RNU6-505P-201ENST00000384427 107 ntBASIC1.47□□□□□ -2.17
CDCA3Q99618 Y_RNA.570-201ENST00000384750 101 ntBASIC1.47□□□□□ -2.17
CDCA3Q99618 RNU5A-5P-201ENST00000411054 116 ntBASIC1.47□□□□□ -2.17
CDCA3Q99618 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.47□□□□□ -2.17
CDCA3Q99618 RNU1-98P-201ENST00000458992 160 ntBASIC1.47□□□□□ -2.17
CDCA3Q99618 RNU7-34P-201ENST00000459394 64 ntBASIC1.47□□□□□ -2.17
CDCA3Q99618 RNU7-94P-201ENST00000459576 63 ntBASIC1.47□□□□□ -2.17
CDCA3Q99618 AC023790.1-201ENST00000482174 347 ntBASIC1.47□□□□□ -2.17
CDCA3Q99618 AC008834.1-201ENST00000511612 175 ntBASIC1.47□□□□□ -2.17
CDCA3Q99618 RNU6-436P-201ENST00000516171 114 ntBASIC1.47□□□□□ -2.17
CDCA3Q99618 RNU6-1153P-201ENST00000516760 105 ntBASIC1.47□□□□□ -2.17
CDCA3Q99618 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.47□□□□□ -2.17
CDCA3Q99618 AC020661.2-201ENST00000560114 134 ntBASIC1.47□□□□□ -2.17
CDCA3Q99618 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.47□□□□□ -2.17
CDCA3Q99618 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.47□□□□□ -2.17
CDCA3Q99618 SNORD114-7-201ENST00000362520 77 ntBASIC1.46□□□□□ -2.18
CDCA3Q99618 RNU6-450P-201ENST00000364654 107 ntBASIC1.46□□□□□ -2.18
CDCA3Q99618 Y_RNA.267-201ENST00000364679 109 ntBASIC1.46□□□□□ -2.18
CDCA3Q99618 Y_RNA.389-201ENST00000383924 113 ntBASIC1.46□□□□□ -2.18
CDCA3Q99618 Y_RNA.462-201ENST00000384268 102 ntBASIC1.46□□□□□ -2.18
CDCA3Q99618 RN7SKP200-201ENST00000410564 320 ntBASIC1.46□□□□□ -2.18
CDCA3Q99618 RN7SKP51-201ENST00000410781 304 ntBASIC1.46□□□□□ -2.18
CDCA3Q99618 AL354751.2-201ENST00000415471 210 ntBASIC1.46□□□□□ -2.18
CDCA3Q99618 snoU13.9-201ENST00000458927 103 ntBASIC1.46□□□□□ -2.18
CDCA3Q99618 AC091021.1-201ENST00000468051 388 ntBASIC1.46□□□□□ -2.18
CDCA3Q99618 SNORA70.12-201ENST00000516084 153 ntBASIC1.46□□□□□ -2.18
CDCA3Q99618 RNU6-1278P-201ENST00000516130 107 ntBASIC1.46□□□□□ -2.18
CDCA3Q99618 RNU7-110P-201ENST00000516891 62 ntBASIC1.46□□□□□ -2.18
CDCA3Q99618 Y_RNA.711-201ENST00000516993 102 ntBASIC1.46□□□□□ -2.18
CDCA3Q99618 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.46□□□□□ -2.18
CDCA3Q99618 PART1_1.1-201ENST00000611761 217 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 213.8 ms