Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RNU6-136P-201ENST00000384663 107 ntBASIC-0.93□□□□□ -2.56
IFT140Q96RY7 SNORD115.1-201ENST00000391109 76 ntBASIC-0.93□□□□□ -2.56
IFT140Q96RY7 MIR1257-201ENST00000408490 117 ntBASIC-0.93□□□□□ -2.56
IFT140Q96RY7 AC018865.2-201ENST00000423631 129 ntBASIC-0.93□□□□□ -2.56
IFT140Q96RY7 AC133104.1-201ENST00000429100 218 ntBASIC-0.93□□□□□ -2.56
IFT140Q96RY7 RNU7-185P-201ENST00000459215 60 ntBASIC-0.93□□□□□ -2.56
IFT140Q96RY7 AC091885.1-201ENST00000506658 268 ntBASIC-0.93□□□□□ -2.56
IFT140Q96RY7 SNORD45.4-201ENST00000516629 73 ntBASIC-0.93□□□□□ -2.56
IFT140Q96RY7 MTND2P32-201ENST00000521584 1038 ntBASIC-0.93□□□□□ -2.56
IFT140Q96RY7 MTND1P35-201ENST00000526739 508 ntBASIC-0.93□□□□□ -2.56
IFT140Q96RY7 AC018448.1-201ENST00000552843 316 ntBASIC-0.93□□□□□ -2.56
IFT140Q96RY7 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-0.93□□□□□ -2.56
IFT140Q96RY7 AC090617.3-201ENST00000573670 475 ntBASIC-0.93□□□□□ -2.56
IFT140Q96RY7 MIR3681-201ENST00000580089 72 ntBASIC-0.93□□□□□ -2.56
IFT140Q96RY7 AC009159.2-201ENST00000617603 606 ntBASIC-0.93□□□□□ -2.56
IFT140Q96RY7 AC068137.4-201ENST00000638485 296 ntBASIC-0.93□□□□□ -2.56
IFT140Q96RY7 AC013437.2-201ENST00000639587 677 ntBASIC-0.93□□□□□ -2.56
IFT140Q96RY7 MIR501-201ENST00000390204 84 ntBASIC-0.94□□□□□ -2.56
IFT140Q96RY7 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.94□□□□□ -2.56
IFT140Q96RY7 RNU6-897P-201ENST00000517135 105 ntBASIC-0.94□□□□□ -2.56
IFT140Q96RY7 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.94□□□□□ -2.56
IFT140Q96RY7 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.94□□□□□ -2.56
IFT140Q96RY7 CR383656.4-201ENST00000546909 122 ntBASIC-0.94□□□□□ -2.56
IFT140Q96RY7 MTND4P33-201ENST00000556706 766 ntBASIC-0.94□□□□□ -2.56
IFT140Q96RY7 NAMPTP3-201ENST00000569273 224 ntBASIC-0.94□□□□□ -2.56
IFT140Q96RY7 AL355297.3-201ENST00000604082 446 ntBASIC-0.94□□□□□ -2.56
IFT140Q96RY7 RNU4-84P-201ENST00000364200 139 ntBASIC-0.95□□□□□ -2.56
IFT140Q96RY7 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.95□□□□□ -2.56
IFT140Q96RY7 SNORD116.1-201ENST00000365628 92 ntBASIC-0.95□□□□□ -2.56
IFT140Q96RY7 RNU6-735P-201ENST00000410612 107 ntBASIC-0.95□□□□□ -2.56
IFT140Q96RY7 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.95□□□□□ -2.56
IFT140Q96RY7 MTCO2P11-201ENST00000431069 680 ntBASIC-0.95□□□□□ -2.56
IFT140Q96RY7 AL358934.1-201ENST00000432346 324 ntBASIC-0.95□□□□□ -2.56
IFT140Q96RY7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.95□□□□□ -2.56
IFT140Q96RY7 PRDX4P1-201ENST00000507189 574 ntBASIC-0.95□□□□□ -2.56
IFT140Q96RY7 BNIP3P40-201ENST00000596017 556 ntBASIC-0.95□□□□□ -2.56
IFT140Q96RY7 AC016597.2-201ENST00000613256 341 ntBASIC-0.95□□□□□ -2.56
IFT140Q96RY7 AL121895.2-201ENST00000619558 447 ntBASIC-0.95□□□□□ -2.56
IFT140Q96RY7 MTND1P7-201ENST00000632801 297 ntBASIC-0.95□□□□□ -2.56
IFT140Q96RY7 AL163152.1-201ENST00000642001 374 ntBASIC-0.95□□□□□ -2.56
IFT140Q96RY7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.95□□□□□ -2.56
IFT140Q96RY7 AC010332.2-201ENST00000613083 1904 ntBASIC-0.96□□□□□ -2.56
IFT140Q96RY7 MIR450B-201ENST00000401182 78 ntBASIC-0.96□□□□□ -2.56
IFT140Q96RY7 AL365184.2-201ENST00000431139 435 ntBASIC-0.96□□□□□ -2.56
IFT140Q96RY7 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.96□□□□□ -2.56
IFT140Q96RY7 RNA5SP47-201ENST00000517230 109 ntBASIC-0.96□□□□□ -2.56
IFT140Q96RY7 AP001328.1-201ENST00000528550 176 ntBASIC-0.96□□□□□ -2.56
IFT140Q96RY7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.96□□□□□ -2.56
IFT140Q96RY7 MIR548AD-201ENST00000584780 82 ntBASIC-0.96□□□□□ -2.56
IFT140Q96RY7 AC127459.3-201ENST00000624328 466 ntBASIC-0.96□□□□□ -2.56
IFT140Q96RY7 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-0.96□□□□□ -2.56
IFT140Q96RY7 SNORA25.7-201ENST00000364375 127 ntBASIC-0.97□□□□□ -2.56
IFT140Q96RY7 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.97□□□□□ -2.56
IFT140Q96RY7 RPL21P38-201ENST00000418090 167 ntBASIC-0.97□□□□□ -2.56
IFT140Q96RY7 MTND4P32-201ENST00000437189 1237 ntBASIC-0.97□□□□□ -2.56
IFT140Q96RY7 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.97□□□□□ -2.56
IFT140Q96RY7 AC018710.1-201ENST00000506509 158 ntBASIC-0.97□□□□□ -2.56
IFT140Q96RY7 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-0.97□□□□□ -2.56
IFT140Q96RY7 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.97□□□□□ -2.56
IFT140Q96RY7 SCARNA24.1-201ENST00000516465 137 ntBASIC-0.97□□□□□ -2.56
IFT140Q96RY7 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.97□□□□□ -2.56
IFT140Q96RY7 AGGF1P4-201ENST00000568249 801 ntBASIC-0.97□□□□□ -2.56
IFT140Q96RY7 AL359999.1-201ENST00000604513 294 ntBASIC-0.97□□□□□ -2.56
IFT140Q96RY7 AC121247.2-201ENST00000604776 136 ntBASIC-0.97□□□□□ -2.56
IFT140Q96RY7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.97□□□□□ -2.56
IFT140Q96RY7 AC022306.2-201ENST00000617563 647 ntBASIC-0.97□□□□□ -2.56
IFT140Q96RY7 AL391099.1-201ENST00000624635 187 ntBASIC-0.97□□□□□ -2.56
IFT140Q96RY7 SNORD114-11-201ENST00000363738 75 ntBASIC-0.98□□□□□ -2.57
IFT140Q96RY7 SNORA63C-201ENST00000364578 129 ntBASIC-0.98□□□□□ -2.57
IFT140Q96RY7 RNU6-533P-201ENST00000384144 107 ntBASIC-0.98□□□□□ -2.57
IFT140Q96RY7 MIR215-201ENST00000384858 110 ntBASIC-0.98□□□□□ -2.57
IFT140Q96RY7 MCFD2P1-201ENST00000417812 300 ntBASIC-0.98□□□□□ -2.57
IFT140Q96RY7 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.98□□□□□ -2.57
IFT140Q96RY7 AL137792.2-201ENST00000443484 235 ntBASIC-0.98□□□□□ -2.57
IFT140Q96RY7 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.98□□□□□ -2.57
IFT140Q96RY7 RNU6-1220P-201ENST00000517126 108 ntBASIC-0.98□□□□□ -2.57
IFT140Q96RY7 AC006380.1-201ENST00000603598 186 ntBASIC-0.98□□□□□ -2.57
IFT140Q96RY7 RNU1-29P-201ENST00000606574 126 ntBASIC-0.98□□□□□ -2.57
IFT140Q96RY7 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.98□□□□□ -2.57
IFT140Q96RY7 Y_RNA.18-201ENST00000362461 102 ntBASIC-0.99□□□□□ -2.57
IFT140Q96RY7 SNORA27.1-201ENST00000362604 124 ntBASIC-0.99□□□□□ -2.57
IFT140Q96RY7 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.99□□□□□ -2.57
IFT140Q96RY7 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.99□□□□□ -2.57
IFT140Q96RY7 MTND3P1-201ENST00000441336 220 ntBASIC-0.99□□□□□ -2.57
IFT140Q96RY7 HMGN2P32-201ENST00000444648 269 ntBASIC-0.99□□□□□ -2.57
IFT140Q96RY7 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.99□□□□□ -2.57
IFT140Q96RY7 AC006600.1-201ENST00000572529 153 ntBASIC-0.99□□□□□ -2.57
IFT140Q96RY7 MIR4432-201ENST00000581823 84 ntBASIC-0.99□□□□□ -2.57
IFT140Q96RY7 MIR3941-201ENST00000582572 103 ntBASIC-0.99□□□□□ -2.57
IFT140Q96RY7 MIR3925-201ENST00000584674 77 ntBASIC-0.99□□□□□ -2.57
IFT140Q96RY7 AC126544.2-201ENST00000625174 749 ntBASIC-0.99□□□□□ -2.57
IFT140Q96RY7 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.99□□□□□ -2.57
IFT140Q96RY7 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.99□□□□□ -2.57
IFT140Q96RY7 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.99□□□□□ -2.57
IFT140Q96RY7 RPS27AP14-201ENST00000422868 454 ntBASIC-0.99□□□□□ -2.57
IFT140Q96RY7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.99□□□□□ -2.57
IFT140Q96RY7 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.99□□□□□ -2.57
IFT140Q96RY7 AC116353.2-201ENST00000505332 712 ntBASIC-0.99□□□□□ -2.57
IFT140Q96RY7 RNU6-107P-201ENST00000516643 102 ntBASIC-0.99□□□□□ -2.57
IFT140Q96RY7 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.99□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms