Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 HSPE1P13-201ENST00000451143 297 ntBASIC1.24□□□□□ -2.21
RAB3IPQ96QF0 AC048334.1-201ENST00000477975 159 ntBASIC1.24□□□□□ -2.21
RAB3IPQ96QF0 SNORA31.2-201ENST00000516019 134 ntBASIC1.24□□□□□ -2.21
RAB3IPQ96QF0 Y_RNA.676-201ENST00000516393 96 ntBASIC1.24□□□□□ -2.21
RAB3IPQ96QF0 AL358944.1-201ENST00000528537 144 ntBASIC1.24□□□□□ -2.21
RAB3IPQ96QF0 AL132765.2-201ENST00000610812 351 ntBASIC1.24□□□□□ -2.21
RAB3IPQ96QF0 AC138305.3-201ENST00000624988 240 ntBASIC1.24□□□□□ -2.21
RAB3IPQ96QF0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
RAB3IPQ96QF0 SNORD68-201ENST00000363214 84 ntBASIC1.23□□□□□ -2.21
RAB3IPQ96QF0 SNORA2.2-201ENST00000365473 135 ntBASIC1.23□□□□□ -2.21
RAB3IPQ96QF0 RNU6-1040P-201ENST00000383974 107 ntBASIC1.23□□□□□ -2.21
RAB3IPQ96QF0 SNORD116-13-201ENST00000384408 92 ntBASIC1.23□□□□□ -2.21
RAB3IPQ96QF0 AL162725.1-201ENST00000435405 301 ntBASIC1.23□□□□□ -2.21
RAB3IPQ96QF0 RPS4XP11-201ENST00000446897 772 ntBASIC1.23□□□□□ -2.21
RAB3IPQ96QF0 AL645939.4-201ENST00000604495 135 ntBASIC1.23□□□□□ -2.21
RAB3IPQ96QF0 U6.92-201ENST00000636464 89 ntBASIC1.23□□□□□ -2.21
RAB3IPQ96QF0 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
RAB3IPQ96QF0 Y_RNA.446-201ENST00000384178 104 ntBASIC1.22□□□□□ -2.21
RAB3IPQ96QF0 RNU6-163P-201ENST00000384396 106 ntBASIC1.22□□□□□ -2.21
RAB3IPQ96QF0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.22□□□□□ -2.21
RAB3IPQ96QF0 PIGPP3-201ENST00000425307 415 ntBASIC1.22□□□□□ -2.21
RAB3IPQ96QF0 CHEK2P4-201ENST00000450340 246 ntBASIC1.22□□□□□ -2.21
RAB3IPQ96QF0 RNU6-966P-201ENST00000516479 104 ntBASIC1.22□□□□□ -2.21
RAB3IPQ96QF0 RNA5SP404-201ENST00000517118 132 ntBASIC1.22□□□□□ -2.21
RAB3IPQ96QF0 SNORA70.22-201ENST00000517160 124 ntBASIC1.22□□□□□ -2.21
RAB3IPQ96QF0 AC006600.1-201ENST00000572529 153 ntBASIC1.22□□□□□ -2.21
RAB3IPQ96QF0 AL355375.2-201ENST00000574825 175 ntBASIC1.22□□□□□ -2.21
RAB3IPQ96QF0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.22□□□□□ -2.21
RAB3IPQ96QF0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
RAB3IPQ96QF0 Y_RNA.172-201ENST00000363765 102 ntBASIC1.21□□□□□ -2.22
RAB3IPQ96QF0 RNU6-910P-201ENST00000390844 107 ntBASIC1.21□□□□□ -2.22
RAB3IPQ96QF0 MIR891A-201ENST00000401237 79 ntBASIC1.21□□□□□ -2.22
RAB3IPQ96QF0 RNU6-1199P-201ENST00000411249 104 ntBASIC1.21□□□□□ -2.22
RAB3IPQ96QF0 RPL23AP36-201ENST00000413895 458 ntBASIC1.21□□□□□ -2.22
RAB3IPQ96QF0 Y_RNA.632-201ENST00000459189 102 ntBASIC1.21□□□□□ -2.22
RAB3IPQ96QF0 AC091951.2-201ENST00000500762 203 ntBASIC1.21□□□□□ -2.22
RAB3IPQ96QF0 MIR4303-201ENST00000581299 66 ntBASIC1.21□□□□□ -2.22
RAB3IPQ96QF0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.21□□□□□ -2.22
RAB3IPQ96QF0 Y_RNA.27-201ENST00000362540 103 ntBASIC1.2□□□□□ -2.22
RAB3IPQ96QF0 Y_RNA.303-201ENST00000364998 94 ntBASIC1.2□□□□□ -2.22
RAB3IPQ96QF0 Y_RNA.428-201ENST00000384078 102 ntBASIC1.2□□□□□ -2.22
RAB3IPQ96QF0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
RAB3IPQ96QF0 SNORA17.3-201ENST00000391159 129 ntBASIC1.2□□□□□ -2.22
RAB3IPQ96QF0 MTCO2P27-201ENST00000420740 428 ntBASIC1.2□□□□□ -2.22
RAB3IPQ96QF0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.2□□□□□ -2.22
RAB3IPQ96QF0 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.2□□□□□ -2.22
RAB3IPQ96QF0 RPS29P28-201ENST00000446439 141 ntBASIC1.2□□□□□ -2.22
RAB3IPQ96QF0 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.2□□□□□ -2.22
RAB3IPQ96QF0 AC011604.1-201ENST00000545978 196 ntBASIC1.2□□□□□ -2.22
RAB3IPQ96QF0 FAM106DP-201ENST00000586416 501 ntBASIC1.2□□□□□ -2.22
RAB3IPQ96QF0 AC120024.3-201ENST00000603167 156 ntBASIC1.2□□□□□ -2.22
RAB3IPQ96QF0 AP000942.3-201ENST00000603702 160 ntBASIC1.2□□□□□ -2.22
RAB3IPQ96QF0 AC027335.2-201ENST00000624030 375 ntBASIC1.2□□□□□ -2.22
RAB3IPQ96QF0 Y_RNA.463-201ENST00000384271 102 ntBASIC1.19□□□□□ -2.22
RAB3IPQ96QF0 MIR526A1-201ENST00000384897 85 ntBASIC1.19□□□□□ -2.22
RAB3IPQ96QF0 RNU2-61P-201ENST00000411069 191 ntBASIC1.19□□□□□ -2.22
RAB3IPQ96QF0 AC093019.1-201ENST00000443135 252 ntBASIC1.19□□□□□ -2.22
RAB3IPQ96QF0 RPL39P39-201ENST00000455840 151 ntBASIC1.19□□□□□ -2.22
RAB3IPQ96QF0 RNU1-123P-201ENST00000458950 160 ntBASIC1.19□□□□□ -2.22
RAB3IPQ96QF0 AL163540.1-201ENST00000485382 386 ntBASIC1.19□□□□□ -2.22
RAB3IPQ96QF0 CYCTP-201ENST00000504253 315 ntBASIC1.19□□□□□ -2.22
RAB3IPQ96QF0 SNORA31.4-201ENST00000516049 129 ntBASIC1.19□□□□□ -2.22
RAB3IPQ96QF0 RNU6-436P-201ENST00000516171 114 ntBASIC1.19□□□□□ -2.22
RAB3IPQ96QF0 RNU6-911P-201ENST00000516523 104 ntBASIC1.19□□□□□ -2.22
RAB3IPQ96QF0 SNORD116.3-201ENST00000517176 78 ntBASIC1.19□□□□□ -2.22
RAB3IPQ96QF0 VN1R91P-201ENST00000594377 169 ntBASIC1.19□□□□□ -2.22
RAB3IPQ96QF0 AL357312.1-201ENST00000603879 298 ntBASIC1.19□□□□□ -2.22
RAB3IPQ96QF0 AL591926.4-201ENST00000616895 298 ntBASIC1.19□□□□□ -2.22
RAB3IPQ96QF0 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.19□□□□□ -2.22
RAB3IPQ96QF0 RNU6-833P-201ENST00000363486 107 ntBASIC1.18□□□□□ -2.22
RAB3IPQ96QF0 RNU6-1105P-201ENST00000384774 107 ntBASIC1.18□□□□□ -2.22
RAB3IPQ96QF0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.18□□□□□ -2.22
RAB3IPQ96QF0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.18□□□□□ -2.22
RAB3IPQ96QF0 AL591704.2-201ENST00000421658 181 ntBASIC1.18□□□□□ -2.22
RAB3IPQ96QF0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.18□□□□□ -2.22
RAB3IPQ96QF0 AL603825.1-201ENST00000438481 80 ntBASIC1.18□□□□□ -2.22
RAB3IPQ96QF0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.18□□□□□ -2.22
RAB3IPQ96QF0 AC114811.1-201ENST00000507207 168 ntBASIC1.18□□□□□ -2.22
RAB3IPQ96QF0 Y_RNA.661-201ENST00000516003 99 ntBASIC1.18□□□□□ -2.22
RAB3IPQ96QF0 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.18□□□□□ -2.22
RAB3IPQ96QF0 AC004832.4-201ENST00000608952 331 ntBASIC1.18□□□□□ -2.22
RAB3IPQ96QF0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.18□□□□□ -2.22
RAB3IPQ96QF0 RNU4-79P-201ENST00000362764 141 ntBASIC1.17□□□□□ -2.22
RAB3IPQ96QF0 Y_RNA.356-201ENST00000365475 113 ntBASIC1.17□□□□□ -2.22
RAB3IPQ96QF0 RNU6-1054P-201ENST00000411293 104 ntBASIC1.17□□□□□ -2.22
RAB3IPQ96QF0 MLLT10P1-201ENST00000418346 262 ntBASIC1.17□□□□□ -2.22
RAB3IPQ96QF0 AC245047.7-201ENST00000440265 293 ntBASIC1.17□□□□□ -2.22
RAB3IPQ96QF0 OR2A41P-201ENST00000473586 105 ntBASIC1.17□□□□□ -2.22
RAB3IPQ96QF0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.17□□□□□ -2.22
RAB3IPQ96QF0 RNU6-875P-201ENST00000516488 106 ntBASIC1.17□□□□□ -2.22
RAB3IPQ96QF0 MIR4272-201ENST00000635924 64 ntBASIC1.17□□□□□ -2.22
RAB3IPQ96QF0 ZNF209P-201ENST00000593450 2304 ntBASIC1.17□□□□□ -2.22
RAB3IPQ96QF0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
RAB3IPQ96QF0 MIR378A-201ENST00000362177 66 ntBASIC1.16□□□□□ -2.22
RAB3IPQ96QF0 MIR337-201ENST00000362281 93 ntBASIC1.16□□□□□ -2.22
RAB3IPQ96QF0 Y_RNA.146-201ENST00000363549 102 ntBASIC1.16□□□□□ -2.22
RAB3IPQ96QF0 Y_RNA.187-201ENST00000363918 113 ntBASIC1.16□□□□□ -2.22
RAB3IPQ96QF0 Y_RNA.230-201ENST00000364348 109 ntBASIC1.16□□□□□ -2.22
RAB3IPQ96QF0 RNU6-1175P-201ENST00000365200 107 ntBASIC1.16□□□□□ -2.22
RAB3IPQ96QF0 Y_RNA.329-201ENST00000365209 107 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms