Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CCDC138Q96M89 RNU4-13P-201ENST00000364019 141 ntBASIC2.02□□□□□ -2.09
CCDC138Q96M89 Y_RNA.267-201ENST00000364679 109 ntBASIC2.02□□□□□ -2.09
CCDC138Q96M89 Y_RNA.338-201ENST00000365320 114 ntBASIC2.02□□□□□ -2.09
CCDC138Q96M89 Y_RNA.581-201ENST00000391017 97 ntBASIC2.02□□□□□ -2.09
CCDC138Q96M89 RNU6-1248P-201ENST00000391096 64 ntBASIC2.02□□□□□ -2.09
CCDC138Q96M89 MIR1267-201ENST00000408723 78 ntBASIC2.02□□□□□ -2.09
CCDC138Q96M89 RNU6-855P-201ENST00000410395 104 ntBASIC2.02□□□□□ -2.09
CCDC138Q96M89 RNA5SP489-201ENST00000410986 109 ntBASIC2.02□□□□□ -2.09
CCDC138Q96M89 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.02□□□□□ -2.09
CCDC138Q96M89 AL591806.2-201ENST00000433122 173 ntBASIC2.02□□□□□ -2.09
CCDC138Q96M89 AL731563.1-201ENST00000442202 214 ntBASIC2.02□□□□□ -2.09
CCDC138Q96M89 RNU7-34P-201ENST00000459394 64 ntBASIC2.02□□□□□ -2.09
CCDC138Q96M89 HMGN1P10-201ENST00000474557 553 ntBASIC2.02□□□□□ -2.09
CCDC138Q96M89 RN7SL274P-201ENST00000492268 272 ntBASIC2.02□□□□□ -2.09
CCDC138Q96M89 RNU6-1096P-201ENST00000517089 102 ntBASIC2.02□□□□□ -2.09
CCDC138Q96M89 AC015720.1-201ENST00000565251 277 ntBASIC2.02□□□□□ -2.09
CCDC138Q96M89 AL162424.1-201ENST00000602325 221 ntBASIC2.02□□□□□ -2.09
CCDC138Q96M89 Y_RNA.164-201ENST00000363709 102 ntBASIC2.01□□□□□ -2.09
CCDC138Q96M89 Y_RNA.269-201ENST00000364685 89 ntBASIC2.01□□□□□ -2.09
CCDC138Q96M89 Y_RNA.341-201ENST00000365341 102 ntBASIC2.01□□□□□ -2.09
CCDC138Q96M89 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC138Q96M89 AL603825.1-201ENST00000438481 80 ntBASIC2.01□□□□□ -2.09
CCDC138Q96M89 HSPE1P25-201ENST00000455484 251 ntBASIC2.01□□□□□ -2.09
CCDC138Q96M89 HMGN2P23-201ENST00000456759 269 ntBASIC2.01□□□□□ -2.09
CCDC138Q96M89 AP002004.2-201ENST00000531656 154 ntBASIC2.01□□□□□ -2.09
CCDC138Q96M89 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.01□□□□□ -2.09
CCDC138Q96M89 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CCDC138Q96M89 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
CCDC138Q96M89 Y_RNA.64-201ENST00000362845 102 ntBASIC2□□□□□ -2.09
CCDC138Q96M89 Y_RNA.118-201ENST00000363300 101 ntBASIC2□□□□□ -2.09
CCDC138Q96M89 Y_RNA.145-201ENST00000363527 102 ntBASIC2□□□□□ -2.09
CCDC138Q96M89 Y_RNA.172-201ENST00000363765 102 ntBASIC2□□□□□ -2.09
CCDC138Q96M89 SNORA63C-201ENST00000364578 129 ntBASIC2□□□□□ -2.09
CCDC138Q96M89 RNU6-806P-201ENST00000365147 105 ntBASIC2□□□□□ -2.09
CCDC138Q96M89 Y_RNA.368-201ENST00000365547 113 ntBASIC2□□□□□ -2.09
CCDC138Q96M89 Y_RNA.456-201ENST00000384232 111 ntBASIC2□□□□□ -2.09
CCDC138Q96M89 SNORD116-13-201ENST00000384408 92 ntBASIC2□□□□□ -2.09
CCDC138Q96M89 RNU6-102P-201ENST00000384485 104 ntBASIC2□□□□□ -2.09
CCDC138Q96M89 RNU6-1031P-201ENST00000384773 107 ntBASIC2□□□□□ -2.09
CCDC138Q96M89 AL034345.1-201ENST00000407768 123 ntBASIC2□□□□□ -2.09
CCDC138Q96M89 AL139156.1-201ENST00000412785 841 ntBASIC2□□□□□ -2.09
CCDC138Q96M89 HSPE1P21-201ENST00000438283 308 ntBASIC2□□□□□ -2.09
CCDC138Q96M89 RPS20P10-201ENST00000451209 253 ntBASIC2□□□□□ -2.09
CCDC138Q96M89 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2□□□□□ -2.09
CCDC138Q96M89 RNU6-1291P-201ENST00000516591 104 ntBASIC2□□□□□ -2.09
CCDC138Q96M89 RNU2-56P-201ENST00000516826 190 ntBASIC2□□□□□ -2.09
CCDC138Q96M89 AL358944.1-201ENST00000528537 144 ntBASIC2□□□□□ -2.09
CCDC138Q96M89 AP003733.2-201ENST00000529409 171 ntBASIC2□□□□□ -2.09
CCDC138Q96M89 MIR3198-2-201ENST00000577868 80 ntBASIC2□□□□□ -2.09
CCDC138Q96M89 MIR3145-201ENST00000580727 82 ntBASIC2□□□□□ -2.09
CCDC138Q96M89 AC005972.2-201ENST00000604690 348 ntBASIC2□□□□□ -2.09
CCDC138Q96M89 SNORA28-201ENST00000606769 126 ntBASIC2□□□□□ -2.09
CCDC138Q96M89 AL353997.5-201ENST00000618886 171 ntBASIC2□□□□□ -2.09
CCDC138Q96M89 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2□□□□□ -2.09
CCDC138Q96M89 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2□□□□□ -2.09
CCDC138Q96M89 AC100821.1-201ENST00000523153 2479 ntBASIC1.99□□□□□ -2.09
CCDC138Q96M89 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.99□□□□□ -2.09
CCDC138Q96M89 RNA5SP160-201ENST00000364866 120 ntBASIC1.99□□□□□ -2.09
CCDC138Q96M89 Y_RNA.569-201ENST00000384749 103 ntBASIC1.99□□□□□ -2.09
CCDC138Q96M89 RNU2-2P-201ENST00000410396 191 ntBASIC1.99□□□□□ -2.09
CCDC138Q96M89 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC138Q96M89 AC233266.1-201ENST00000454518 96 ntBASIC1.99□□□□□ -2.09
CCDC138Q96M89 AC098869.1-201ENST00000481627 292 ntBASIC1.99□□□□□ -2.09
CCDC138Q96M89 RNU7-28P-201ENST00000516759 62 ntBASIC1.99□□□□□ -2.09
CCDC138Q96M89 MIR4648-201ENST00000580107 72 ntBASIC1.99□□□□□ -2.09
CCDC138Q96M89 SNRPGP19-201ENST00000603826 189 ntBASIC1.99□□□□□ -2.09
CCDC138Q96M89 AC012493.3-201ENST00000604494 112 ntBASIC1.99□□□□□ -2.09
CCDC138Q96M89 AC004832.4-201ENST00000608952 331 ntBASIC1.99□□□□□ -2.09
CCDC138Q96M89 AC242852.1-201ENST00000612151 96 ntBASIC1.99□□□□□ -2.09
CCDC138Q96M89 Y_RNA.783-201ENST00000613546 102 ntBASIC1.99□□□□□ -2.09
CCDC138Q96M89 AC244015.1-201ENST00000622301 99 ntBASIC1.99□□□□□ -2.09
CCDC138Q96M89 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CCDC138Q96M89 snoU2_19.2-201ENST00000363024 80 ntBASIC1.98□□□□□ -2.09
CCDC138Q96M89 Y_RNA.265-201ENST00000364677 108 ntBASIC1.98□□□□□ -2.09
CCDC138Q96M89 Y_RNA.310-201ENST00000365063 113 ntBASIC1.98□□□□□ -2.09
CCDC138Q96M89 RNU6-738P-201ENST00000384531 106 ntBASIC1.98□□□□□ -2.09
CCDC138Q96M89 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CCDC138Q96M89 RNU6-1109P-201ENST00000391187 107 ntBASIC1.98□□□□□ -2.09
CCDC138Q96M89 SUMO2P12-201ENST00000405924 140 ntBASIC1.98□□□□□ -2.09
CCDC138Q96M89 RPL21P38-201ENST00000418090 167 ntBASIC1.98□□□□□ -2.09
CCDC138Q96M89 snoU13.9-201ENST00000458927 103 ntBASIC1.98□□□□□ -2.09
CCDC138Q96M89 AC008834.1-201ENST00000511612 175 ntBASIC1.98□□□□□ -2.09
CCDC138Q96M89 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.98□□□□□ -2.09
CCDC138Q96M89 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.98□□□□□ -2.09
CCDC138Q96M89 SNORA77B-201ENST00000578179 125 ntBASIC1.98□□□□□ -2.09
CCDC138Q96M89 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.98□□□□□ -2.09
CCDC138Q96M89 AC008737.2-201ENST00000599446 118 ntBASIC1.98□□□□□ -2.09
CCDC138Q96M89 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.98□□□□□ -2.09
CCDC138Q96M89 AC092881.1-201ENST00000638218 2733 ntBASIC1.97□□□□□ -2.09
CCDC138Q96M89 SNORA1B-201ENST00000362535 133 ntBASIC1.97□□□□□ -2.09
CCDC138Q96M89 Y_RNA.26-201ENST00000362539 101 ntBASIC1.97□□□□□ -2.09
CCDC138Q96M89 RNU4-80P-201ENST00000363200 141 ntBASIC1.97□□□□□ -2.09
CCDC138Q96M89 Y_RNA.136-201ENST00000363444 102 ntBASIC1.97□□□□□ -2.09
CCDC138Q96M89 RNU6-290P-201ENST00000365212 101 ntBASIC1.97□□□□□ -2.09
CCDC138Q96M89 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.97□□□□□ -2.09
CCDC138Q96M89 RNU6-203P-201ENST00000384038 104 ntBASIC1.97□□□□□ -2.09
CCDC138Q96M89 AL445646.1-201ENST00000431784 216 ntBASIC1.97□□□□□ -2.09
CCDC138Q96M89 DYNLT3P2-201ENST00000442517 295 ntBASIC1.97□□□□□ -2.09
CCDC138Q96M89 STAG3L5P-204ENST00000443759 179 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 661.2 ms