Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 SNORA40.9-201ENST00000515895 93 ntBASIC0.66□□□□□ -2.3
PKNOX2Q96KN3 RNU6-720P-201ENST00000516363 108 ntBASIC0.66□□□□□ -2.3
PKNOX2Q96KN3 RNA5SP255-201ENST00000516370 107 ntBASIC0.66□□□□□ -2.3
PKNOX2Q96KN3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.66□□□□□ -2.3
PKNOX2Q96KN3 AC011604.1-201ENST00000545978 196 ntBASIC0.66□□□□□ -2.3
PKNOX2Q96KN3 AC080013.6-201ENST00000606185 215 ntBASIC0.66□□□□□ -2.3
PKNOX2Q96KN3 MIR6767-201ENST00000637302 66 ntBASIC0.66□□□□□ -2.3
PKNOX2Q96KN3 Y_RNA.238-201ENST00000364441 102 ntBASIC0.65□□□□□ -2.31
PKNOX2Q96KN3 Y_RNA.358-201ENST00000365491 99 ntBASIC0.65□□□□□ -2.31
PKNOX2Q96KN3 RNU6-163P-201ENST00000384396 106 ntBASIC0.65□□□□□ -2.31
PKNOX2Q96KN3 RNU6-136P-201ENST00000384663 107 ntBASIC0.65□□□□□ -2.31
PKNOX2Q96KN3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.65□□□□□ -2.31
PKNOX2Q96KN3 RPEP5-201ENST00000441137 268 ntBASIC0.65□□□□□ -2.31
PKNOX2Q96KN3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.65□□□□□ -2.31
PKNOX2Q96KN3 Y_RNA.670-201ENST00000516255 105 ntBASIC0.65□□□□□ -2.31
PKNOX2Q96KN3 RNU6-63P-201ENST00000516690 95 ntBASIC0.65□□□□□ -2.31
PKNOX2Q96KN3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.65□□□□□ -2.31
PKNOX2Q96KN3 MIR3192-201ENST00000584920 77 ntBASIC0.65□□□□□ -2.31
PKNOX2Q96KN3 AL008636.1-201ENST00000625038 1018 ntBASIC0.65□□□□□ -2.31
PKNOX2Q96KN3 MIR3688-2-201ENST00000636963 87 ntBASIC0.65□□□□□ -2.31
PKNOX2Q96KN3 Y_RNA.361-201ENST00000365515 120 ntBASIC0.64□□□□□ -2.31
PKNOX2Q96KN3 RNU6-1310P-201ENST00000384153 107 ntBASIC0.64□□□□□ -2.31
PKNOX2Q96KN3 Y_RNA.453-201ENST00000384223 109 ntBASIC0.64□□□□□ -2.31
PKNOX2Q96KN3 MIR548K-201ENST00000408406 116 ntBASIC0.64□□□□□ -2.31
PKNOX2Q96KN3 AC016907.1-201ENST00000419483 435 ntBASIC0.64□□□□□ -2.31
PKNOX2Q96KN3 AL353997.1-201ENST00000432936 108 ntBASIC0.64□□□□□ -2.31
PKNOX2Q96KN3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.64□□□□□ -2.31
PKNOX2Q96KN3 AC018638.8-201ENST00000588755 281 ntBASIC0.64□□□□□ -2.31
PKNOX2Q96KN3 AL078603.1-201ENST00000603824 313 ntBASIC0.64□□□□□ -2.31
PKNOX2Q96KN3 RNA5SP264-201ENST00000363115 107 ntBASIC0.63□□□□□ -2.31
PKNOX2Q96KN3 RNU6-623P-201ENST00000363143 105 ntBASIC0.63□□□□□ -2.31
PKNOX2Q96KN3 MIR452-201ENST00000385020 85 ntBASIC0.63□□□□□ -2.31
PKNOX2Q96KN3 RNU6-510P-201ENST00000391239 108 ntBASIC0.63□□□□□ -2.31
PKNOX2Q96KN3 MIR1287-201ENST00000408492 90 ntBASIC0.63□□□□□ -2.31
PKNOX2Q96KN3 RNA5SP511-201ENST00000410487 115 ntBASIC0.63□□□□□ -2.31
PKNOX2Q96KN3 AL354751.2-201ENST00000415471 210 ntBASIC0.63□□□□□ -2.31
PKNOX2Q96KN3 PIGPP3-201ENST00000425307 415 ntBASIC0.63□□□□□ -2.31
PKNOX2Q96KN3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.63□□□□□ -2.31
PKNOX2Q96KN3 AL162725.1-201ENST00000435405 301 ntBASIC0.63□□□□□ -2.31
PKNOX2Q96KN3 FABP5P4-201ENST00000437203 171 ntBASIC0.63□□□□□ -2.31
PKNOX2Q96KN3 ELOCP24-201ENST00000456370 334 ntBASIC0.63□□□□□ -2.31
PKNOX2Q96KN3 AC114811.1-201ENST00000507207 168 ntBASIC0.63□□□□□ -2.31
PKNOX2Q96KN3 Y_RNA.708-201ENST00000516950 96 ntBASIC0.63□□□□□ -2.31
PKNOX2Q96KN3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.63□□□□□ -2.31
PKNOX2Q96KN3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.63□□□□□ -2.31
PKNOX2Q96KN3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.63□□□□□ -2.31
PKNOX2Q96KN3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
PKNOX2Q96KN3 Y_RNA.3-201ENST00000362331 103 ntBASIC0.62□□□□□ -2.31
PKNOX2Q96KN3 SNORD68-201ENST00000363214 84 ntBASIC0.62□□□□□ -2.31
PKNOX2Q96KN3 Y_RNA.226-201ENST00000364337 114 ntBASIC0.62□□□□□ -2.31
PKNOX2Q96KN3 U8.5-201ENST00000364528 136 ntBASIC0.62□□□□□ -2.31
PKNOX2Q96KN3 RNU6-1105P-201ENST00000384774 107 ntBASIC0.62□□□□□ -2.31
PKNOX2Q96KN3 MIR605-201ENST00000385078 83 ntBASIC0.62□□□□□ -2.31
PKNOX2Q96KN3 MIR548F5-201ENST00000408421 86 ntBASIC0.62□□□□□ -2.31
PKNOX2Q96KN3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.62□□□□□ -2.31
PKNOX2Q96KN3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.62□□□□□ -2.31
PKNOX2Q96KN3 AC244023.1-201ENST00000426884 112 ntBASIC0.62□□□□□ -2.31
PKNOX2Q96KN3 RPS3AP52-201ENST00000435639 297 ntBASIC0.62□□□□□ -2.31
PKNOX2Q96KN3 AC093019.1-201ENST00000443135 252 ntBASIC0.62□□□□□ -2.31
PKNOX2Q96KN3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.62□□□□□ -2.31
PKNOX2Q96KN3 AP003716.2-201ENST00000528260 108 ntBASIC0.62□□□□□ -2.31
PKNOX2Q96KN3 Z83818.1-201ENST00000603584 150 ntBASIC0.62□□□□□ -2.31
PKNOX2Q96KN3 AC242498.1-201ENST00000604134 111 ntBASIC0.62□□□□□ -2.31
PKNOX2Q96KN3 MIR6504-201ENST00000613520 61 ntBASIC0.62□□□□□ -2.31
PKNOX2Q96KN3 AC243994.1-201ENST00000618627 109 ntBASIC0.62□□□□□ -2.31
PKNOX2Q96KN3 SNORD115-47-201ENST00000391226 86 ntBASIC0.61□□□□□ -2.31
PKNOX2Q96KN3 MIR1276-201ENST00000408707 83 ntBASIC0.61□□□□□ -2.31
PKNOX2Q96KN3 MIR1298-201ENST00000408783 112 ntBASIC0.61□□□□□ -2.31
PKNOX2Q96KN3 SNORD12B-201ENST00000410433 91 ntBASIC0.61□□□□□ -2.31
PKNOX2Q96KN3 AC092423.1-201ENST00000430165 186 ntBASIC0.61□□□□□ -2.31
PKNOX2Q96KN3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.61□□□□□ -2.31
PKNOX2Q96KN3 MIR4452-201ENST00000583004 71 ntBASIC0.61□□□□□ -2.31
PKNOX2Q96KN3 MIR4762-201ENST00000585261 75 ntBASIC0.61□□□□□ -2.31
PKNOX2Q96KN3 AL353765.1-201ENST00000605514 183 ntBASIC0.61□□□□□ -2.31
PKNOX2Q96KN3 AC090517.2-201ENST00000614966 680 ntBASIC0.61□□□□□ -2.31
PKNOX2Q96KN3 AL591926.4-201ENST00000616895 298 ntBASIC0.61□□□□□ -2.31
PKNOX2Q96KN3 MIR6835-201ENST00000621552 64 ntBASIC0.61□□□□□ -2.31
PKNOX2Q96KN3 RNU6-1301P-201ENST00000362724 104 ntBASIC0.6□□□□□ -2.31
PKNOX2Q96KN3 SNORD115-30-201ENST00000364117 82 ntBASIC0.6□□□□□ -2.31
PKNOX2Q96KN3 RNU6-601P-201ENST00000384540 107 ntBASIC0.6□□□□□ -2.31
PKNOX2Q96KN3 Y_RNA.516-201ENST00000384541 124 ntBASIC0.6□□□□□ -2.31
PKNOX2Q96KN3 AL035398.1-201ENST00000430869 322 ntBASIC0.6□□□□□ -2.31
PKNOX2Q96KN3 MTATP6P26-201ENST00000445926 662 ntBASIC0.6□□□□□ -2.31
PKNOX2Q96KN3 RPL7P42-201ENST00000481005 679 ntBASIC0.6□□□□□ -2.31
PKNOX2Q96KN3 AC098869.1-201ENST00000481627 292 ntBASIC0.6□□□□□ -2.31
PKNOX2Q96KN3 RNU6-1337P-201ENST00000516525 95 ntBASIC0.6□□□□□ -2.31
PKNOX2Q96KN3 MIR2355-201ENST00000517199 87 ntBASIC0.6□□□□□ -2.31
PKNOX2Q96KN3 RNU2-12P-201ENST00000517216 168 ntBASIC0.6□□□□□ -2.31
PKNOX2Q96KN3 AC023442.1-201ENST00000531247 422 ntBASIC0.6□□□□□ -2.31
PKNOX2Q96KN3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.6□□□□□ -2.31
PKNOX2Q96KN3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.6□□□□□ -2.31
PKNOX2Q96KN3 AC005899.2-201ENST00000584353 90 ntBASIC0.6□□□□□ -2.31
PKNOX2Q96KN3 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.6□□□□□ -2.31
PKNOX2Q96KN3 AC136443.5-201ENST00000603741 370 ntBASIC0.6□□□□□ -2.31
PKNOX2Q96KN3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.6□□□□□ -2.31
PKNOX2Q96KN3 MIR6734-201ENST00000621166 68 ntBASIC0.6□□□□□ -2.31
PKNOX2Q96KN3 Y_RNA.339-201ENST00000365325 102 ntBASIC0.59□□□□□ -2.31
PKNOX2Q96KN3 Y_RNA.482-201ENST00000384377 111 ntBASIC0.59□□□□□ -2.31
PKNOX2Q96KN3 MIR508-201ENST00000384857 115 ntBASIC0.59□□□□□ -2.31
PKNOX2Q96KN3 Y_RNA.621-201ENST00000411065 96 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 182.3 ms