Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 MIR6873-201ENST00000622788 63 ntBASIC2.3□□□□□ -2.04
VCPIP1Q96JH7 U6.115-201ENST00000636045 103 ntBASIC2.3□□□□□ -2.04
VCPIP1Q96JH7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
VCPIP1Q96JH7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VCPIP1Q96JH7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VCPIP1Q96JH7 Y_RNA.293-201ENST00000364908 93 ntBASIC2.29□□□□□ -2.04
VCPIP1Q96JH7 RNU6-1130P-201ENST00000365434 107 ntBASIC2.29□□□□□ -2.04
VCPIP1Q96JH7 RNU4-17P-201ENST00000365598 141 ntBASIC2.29□□□□□ -2.04
VCPIP1Q96JH7 AL355497.1-201ENST00000406262 551 ntBASIC2.29□□□□□ -2.04
VCPIP1Q96JH7 MIR1294-201ENST00000408503 142 ntBASIC2.29□□□□□ -2.04
VCPIP1Q96JH7 RNU6-855P-201ENST00000410395 104 ntBASIC2.29□□□□□ -2.04
VCPIP1Q96JH7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.29□□□□□ -2.04
VCPIP1Q96JH7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.29□□□□□ -2.04
VCPIP1Q96JH7 AC022616.8-201ENST00000533569 253 ntBASIC2.29□□□□□ -2.04
VCPIP1Q96JH7 CYCSP26-201ENST00000534107 320 ntBASIC2.29□□□□□ -2.04
VCPIP1Q96JH7 AC078899.2-201ENST00000595282 212 ntBASIC2.29□□□□□ -2.04
VCPIP1Q96JH7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
VCPIP1Q96JH7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.29□□□□□ -2.04
VCPIP1Q96JH7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
VCPIP1Q96JH7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
VCPIP1Q96JH7 RNU6-704P-201ENST00000364162 103 ntBASIC2.28□□□□□ -2.04
VCPIP1Q96JH7 RNU4-10P-201ENST00000364383 140 ntBASIC2.28□□□□□ -2.04
VCPIP1Q96JH7 Y_RNA.272-201ENST00000364696 102 ntBASIC2.28□□□□□ -2.04
VCPIP1Q96JH7 Y_RNA.287-201ENST00000364853 94 ntBASIC2.28□□□□□ -2.04
VCPIP1Q96JH7 SNORA25B-201ENST00000365507 128 ntBASIC2.28□□□□□ -2.04
VCPIP1Q96JH7 SNORD116-18-201ENST00000383961 92 ntBASIC2.28□□□□□ -2.04
VCPIP1Q96JH7 Y_RNA.412-201ENST00000384001 104 ntBASIC2.28□□□□□ -2.04
VCPIP1Q96JH7 MIR561-201ENST00000385216 97 ntBASIC2.28□□□□□ -2.04
VCPIP1Q96JH7 MIR548I2-201ENST00000408348 149 ntBASIC2.28□□□□□ -2.04
VCPIP1Q96JH7 RNU6-710P-201ENST00000410424 105 ntBASIC2.28□□□□□ -2.04
VCPIP1Q96JH7 ATP5EP1-201ENST00000510257 156 ntBASIC2.28□□□□□ -2.04
VCPIP1Q96JH7 Y_RNA.676-201ENST00000516393 96 ntBASIC2.28□□□□□ -2.04
VCPIP1Q96JH7 RNU6-667P-201ENST00000517186 102 ntBASIC2.28□□□□□ -2.04
VCPIP1Q96JH7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.28□□□□□ -2.04
VCPIP1Q96JH7 AC100767.1-201ENST00000528178 123 ntBASIC2.28□□□□□ -2.04
VCPIP1Q96JH7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.28□□□□□ -2.04
VCPIP1Q96JH7 AL078604.3-201ENST00000615580 211 ntBASIC2.28□□□□□ -2.04
VCPIP1Q96JH7 AC013791.1-201ENST00000616619 62 ntBASIC2.28□□□□□ -2.04
VCPIP1Q96JH7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
VCPIP1Q96JH7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
VCPIP1Q96JH7 RNU6-234P-201ENST00000365229 104 ntBASIC2.27□□□□□ -2.05
VCPIP1Q96JH7 Y_RNA.341-201ENST00000365341 102 ntBASIC2.27□□□□□ -2.05
VCPIP1Q96JH7 RNA5SP37-201ENST00000365420 130 ntBASIC2.27□□□□□ -2.05
VCPIP1Q96JH7 Y_RNA.357-201ENST00000365487 109 ntBASIC2.27□□□□□ -2.05
VCPIP1Q96JH7 SNORA72.4-201ENST00000384174 132 ntBASIC2.27□□□□□ -2.05
VCPIP1Q96JH7 MIR586-201ENST00000385035 97 ntBASIC2.27□□□□□ -2.05
VCPIP1Q96JH7 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.27□□□□□ -2.05
VCPIP1Q96JH7 SEPT7P4-201ENST00000437076 306 ntBASIC2.27□□□□□ -2.05
VCPIP1Q96JH7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.27□□□□□ -2.05
VCPIP1Q96JH7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.27□□□□□ -2.05
VCPIP1Q96JH7 RNU7-14P-201ENST00000459331 62 ntBASIC2.27□□□□□ -2.05
VCPIP1Q96JH7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.27□□□□□ -2.05
VCPIP1Q96JH7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.27□□□□□ -2.05
VCPIP1Q96JH7 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.27□□□□□ -2.05
VCPIP1Q96JH7 SNORA4.4-201ENST00000515921 135 ntBASIC2.27□□□□□ -2.05
VCPIP1Q96JH7 Y_RNA.797-201ENST00000515977 94 ntBASIC2.27□□□□□ -2.05
VCPIP1Q96JH7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.27□□□□□ -2.05
VCPIP1Q96JH7 AP001485.1-201ENST00000604799 199 ntBASIC2.27□□□□□ -2.05
VCPIP1Q96JH7 RPL17P51-201ENST00000605218 238 ntBASIC2.27□□□□□ -2.05
VCPIP1Q96JH7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.27□□□□□ -2.05
VCPIP1Q96JH7 AC008873.1-201ENST00000625051 138 ntBASIC2.27□□□□□ -2.05
VCPIP1Q96JH7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
VCPIP1Q96JH7 AC068700.1-201ENST00000565862 3754 ntBASIC2.26□□□□□ -2.05
VCPIP1Q96JH7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.26□□□□□ -2.05
VCPIP1Q96JH7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
VCPIP1Q96JH7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VCPIP1Q96JH7 Y_RNA.121-201ENST00000363309 113 ntBASIC2.26□□□□□ -2.05
VCPIP1Q96JH7 RNU6-312P-201ENST00000364629 107 ntBASIC2.26□□□□□ -2.05
VCPIP1Q96JH7 Y_RNA.580-201ENST00000391004 95 ntBASIC2.26□□□□□ -2.05
VCPIP1Q96JH7 AC009238.1-201ENST00000442165 424 ntBASIC2.26□□□□□ -2.05
VCPIP1Q96JH7 AC009237.6-201ENST00000446969 424 ntBASIC2.26□□□□□ -2.05
VCPIP1Q96JH7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.26□□□□□ -2.05
VCPIP1Q96JH7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.26□□□□□ -2.05
VCPIP1Q96JH7 MIR5694-201ENST00000581190 76 ntBASIC2.26□□□□□ -2.05
VCPIP1Q96JH7 AC022202.1-201ENST00000613515 211 ntBASIC2.26□□□□□ -2.05
VCPIP1Q96JH7 U4atac.1-201ENST00000618345 95 ntBASIC2.26□□□□□ -2.05
VCPIP1Q96JH7 AC012640.5-201ENST00000623897 319 ntBASIC2.26□□□□□ -2.05
VCPIP1Q96JH7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VCPIP1Q96JH7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VCPIP1Q96JH7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
VCPIP1Q96JH7 Y_RNA.23-201ENST00000362496 106 ntBASIC2.25□□□□□ -2.05
VCPIP1Q96JH7 Y_RNA.24-201ENST00000362508 103 ntBASIC2.25□□□□□ -2.05
VCPIP1Q96JH7 Y_RNA.75-201ENST00000362927 97 ntBASIC2.25□□□□□ -2.05
VCPIP1Q96JH7 RNU6-899P-201ENST00000363947 107 ntBASIC2.25□□□□□ -2.05
VCPIP1Q96JH7 Y_RNA.291-201ENST00000364886 113 ntBASIC2.25□□□□□ -2.05
VCPIP1Q96JH7 SNORD50.2-201ENST00000365465 70 ntBASIC2.25□□□□□ -2.05
VCPIP1Q96JH7 Y_RNA.368-201ENST00000365547 113 ntBASIC2.25□□□□□ -2.05
VCPIP1Q96JH7 RNU6-449P-201ENST00000383914 107 ntBASIC2.25□□□□□ -2.05
VCPIP1Q96JH7 RNU1-148P-201ENST00000384472 162 ntBASIC2.25□□□□□ -2.05
VCPIP1Q96JH7 SNORA8.3-201ENST00000384679 139 ntBASIC2.25□□□□□ -2.05
VCPIP1Q96JH7 Y_RNA.572-201ENST00000384757 98 ntBASIC2.25□□□□□ -2.05
VCPIP1Q96JH7 RNU6-381P-201ENST00000391259 108 ntBASIC2.25□□□□□ -2.05
VCPIP1Q96JH7 SNORD23.1-201ENST00000408212 104 ntBASIC2.25□□□□□ -2.05
VCPIP1Q96JH7 MIR1185-2-201ENST00000408687 86 ntBASIC2.25□□□□□ -2.05
VCPIP1Q96JH7 HMGN2P9-201ENST00000476875 229 ntBASIC2.25□□□□□ -2.05
VCPIP1Q96JH7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.25□□□□□ -2.05
VCPIP1Q96JH7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.25□□□□□ -2.05
VCPIP1Q96JH7 SNORD14A-201ENST00000606526 91 ntBASIC2.25□□□□□ -2.05
VCPIP1Q96JH7 AL353997.5-201ENST00000618886 171 ntBASIC2.25□□□□□ -2.05
VCPIP1Q96JH7 MTND1P7-201ENST00000632801 297 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms