Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 RNU4-76P-201ENST00000364509 141 ntBASIC1.41□□□□□ -2.18
SIPA1Q96FS4 Y_RNA.460-201ENST00000384255 102 ntBASIC1.41□□□□□ -2.18
SIPA1Q96FS4 Y_RNA.592-201ENST00000410274 109 ntBASIC1.41□□□□□ -2.18
SIPA1Q96FS4 RNA5SP475-201ENST00000410568 110 ntBASIC1.41□□□□□ -2.18
SIPA1Q96FS4 MTND4P19-201ENST00000446659 478 ntBASIC1.41□□□□□ -2.18
SIPA1Q96FS4 SUMO1P2-201ENST00000452524 304 ntBASIC1.41□□□□□ -2.18
SIPA1Q96FS4 RNU7-169P-201ENST00000459456 61 ntBASIC1.41□□□□□ -2.18
SIPA1Q96FS4 RPL39P38-201ENST00000467018 153 ntBASIC1.41□□□□□ -2.18
SIPA1Q96FS4 RNU6-1137P-201ENST00000517073 99 ntBASIC1.41□□□□□ -2.18
SIPA1Q96FS4 RNU6-264P-201ENST00000517134 104 ntBASIC1.41□□□□□ -2.18
SIPA1Q96FS4 CYP3A52P-201ENST00000563326 91 ntBASIC1.41□□□□□ -2.18
SIPA1Q96FS4 AC055872.1-201ENST00000570978 278 ntBASIC1.41□□□□□ -2.18
SIPA1Q96FS4 MIR3664-201ENST00000579074 99 ntBASIC1.41□□□□□ -2.18
SIPA1Q96FS4 AC091178.2-201ENST00000584401 117 ntBASIC1.41□□□□□ -2.18
SIPA1Q96FS4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SIPA1Q96FS4 SNORD114-7-201ENST00000362520 77 ntBASIC1.4□□□□□ -2.19
SIPA1Q96FS4 RNU6-407P-201ENST00000365280 104 ntBASIC1.4□□□□□ -2.19
SIPA1Q96FS4 RNU6-1310P-201ENST00000384153 107 ntBASIC1.4□□□□□ -2.19
SIPA1Q96FS4 MIR625-201ENST00000385047 85 ntBASIC1.4□□□□□ -2.19
SIPA1Q96FS4 MIR660-201ENST00000385235 97 ntBASIC1.4□□□□□ -2.19
SIPA1Q96FS4 SNORD12B-201ENST00000410433 91 ntBASIC1.4□□□□□ -2.19
SIPA1Q96FS4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.4□□□□□ -2.19
SIPA1Q96FS4 MCFD2P1-201ENST00000417812 300 ntBASIC1.4□□□□□ -2.19
SIPA1Q96FS4 MTND4P28-201ENST00000426217 387 ntBASIC1.4□□□□□ -2.19
SIPA1Q96FS4 RNU6-966P-201ENST00000516479 104 ntBASIC1.4□□□□□ -2.19
SIPA1Q96FS4 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SIPA1Q96FS4 MIR3171-201ENST00000584270 74 ntBASIC1.4□□□□□ -2.19
SIPA1Q96FS4 AC092447.9-201ENST00000603395 144 ntBASIC1.4□□□□□ -2.19
SIPA1Q96FS4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SIPA1Q96FS4 Y_RNA.243-201ENST00000364481 109 ntBASIC1.39□□□□□ -2.19
SIPA1Q96FS4 SNORA22B-201ENST00000383876 138 ntBASIC1.39□□□□□ -2.19
SIPA1Q96FS4 SNORA69.1-201ENST00000390904 137 ntBASIC1.39□□□□□ -2.19
SIPA1Q96FS4 MIR873-201ENST00000401120 77 ntBASIC1.39□□□□□ -2.19
SIPA1Q96FS4 MIR548P-201ENST00000408336 84 ntBASIC1.39□□□□□ -2.19
SIPA1Q96FS4 MTCO2P12-201ENST00000427426 682 ntBASIC1.39□□□□□ -2.19
SIPA1Q96FS4 AL160004.2-201ENST00000432935 350 ntBASIC1.39□□□□□ -2.19
SIPA1Q96FS4 STAG3L5P-204ENST00000443759 179 ntBASIC1.39□□□□□ -2.19
SIPA1Q96FS4 HMGN1P7-201ENST00000491722 313 ntBASIC1.39□□□□□ -2.19
SIPA1Q96FS4 RNU6-976P-201ENST00000516086 111 ntBASIC1.39□□□□□ -2.19
SIPA1Q96FS4 RNU6-341P-201ENST00000516973 96 ntBASIC1.39□□□□□ -2.19
SIPA1Q96FS4 RN7SKP295-201ENST00000517264 153 ntBASIC1.39□□□□□ -2.19
SIPA1Q96FS4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.39□□□□□ -2.19
SIPA1Q96FS4 MIR5188-201ENST00000583467 113 ntBASIC1.39□□□□□ -2.19
SIPA1Q96FS4 AC090971.5-201ENST00000621102 293 ntBASIC1.39□□□□□ -2.19
SIPA1Q96FS4 AC091812.1-201ENST00000432235 1948 ntBASIC1.38□□□□□ -2.19
SIPA1Q96FS4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.38□□□□□ -2.19
SIPA1Q96FS4 MIR26B-201ENST00000362251 77 ntBASIC1.38□□□□□ -2.19
SIPA1Q96FS4 Y_RNA.445-201ENST00000384168 102 ntBASIC1.38□□□□□ -2.19
SIPA1Q96FS4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
SIPA1Q96FS4 RNU6-130P-201ENST00000411112 103 ntBASIC1.38□□□□□ -2.19
SIPA1Q96FS4 AC091021.1-201ENST00000468051 388 ntBASIC1.38□□□□□ -2.19
SIPA1Q96FS4 RNU7-28P-201ENST00000516759 62 ntBASIC1.38□□□□□ -2.19
SIPA1Q96FS4 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.38□□□□□ -2.19
SIPA1Q96FS4 MIR6078-201ENST00000611069 100 ntBASIC1.38□□□□□ -2.19
SIPA1Q96FS4 PART1_1.1-201ENST00000611761 217 ntBASIC1.38□□□□□ -2.19
SIPA1Q96FS4 AC091895.1-201ENST00000624494 256 ntBASIC1.38□□□□□ -2.19
SIPA1Q96FS4 SNORD3E-202ENST00000627253 216 ntBASIC1.38□□□□□ -2.19
SIPA1Q96FS4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
SIPA1Q96FS4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.37□□□□□ -2.19
SIPA1Q96FS4 Y_RNA.314-201ENST00000365114 102 ntBASIC1.37□□□□□ -2.19
SIPA1Q96FS4 RNU1-115P-201ENST00000365329 160 ntBASIC1.37□□□□□ -2.19
SIPA1Q96FS4 RNU6-117P-201ENST00000365415 107 ntBASIC1.37□□□□□ -2.19
SIPA1Q96FS4 RNU6-1227P-201ENST00000383981 107 ntBASIC1.37□□□□□ -2.19
SIPA1Q96FS4 SDAD1P3-201ENST00000427380 333 ntBASIC1.37□□□□□ -2.19
SIPA1Q96FS4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.37□□□□□ -2.19
SIPA1Q96FS4 Y_RNA.631-201ENST00000459607 101 ntBASIC1.37□□□□□ -2.19
SIPA1Q96FS4 AC010655.3-201ENST00000478818 450 ntBASIC1.37□□□□□ -2.19
SIPA1Q96FS4 RNU6-1278P-201ENST00000516130 107 ntBASIC1.37□□□□□ -2.19
SIPA1Q96FS4 SNORD116.3-201ENST00000517176 78 ntBASIC1.37□□□□□ -2.19
SIPA1Q96FS4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SIPA1Q96FS4 AC104695.3-201ENST00000604052 296 ntBASIC1.37□□□□□ -2.19
SIPA1Q96FS4 AC006157.1-201ENST00000611750 366 ntBASIC1.37□□□□□ -2.19
SIPA1Q96FS4 AC133104.2-201ENST00000615272 193 ntBASIC1.37□□□□□ -2.19
SIPA1Q96FS4 AC011476.5-201ENST00000615594 130 ntBASIC1.37□□□□□ -2.19
SIPA1Q96FS4 AC134503.1-201ENST00000633048 54 ntBASIC1.37□□□□□ -2.19
SIPA1Q96FS4 U6.92-201ENST00000636464 89 ntBASIC1.37□□□□□ -2.19
SIPA1Q96FS4 AC099654.10-201ENST00000640395 161 ntBASIC1.37□□□□□ -2.19
SIPA1Q96FS4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SIPA1Q96FS4 Y_RNA.28-201ENST00000362554 111 ntBASIC1.36□□□□□ -2.19
SIPA1Q96FS4 RNU6-961P-201ENST00000363893 105 ntBASIC1.36□□□□□ -2.19
SIPA1Q96FS4 Y_RNA.326-201ENST00000365176 113 ntBASIC1.36□□□□□ -2.19
SIPA1Q96FS4 Y_RNA.361-201ENST00000365515 120 ntBASIC1.36□□□□□ -2.19
SIPA1Q96FS4 Y_RNA.428-201ENST00000384078 102 ntBASIC1.36□□□□□ -2.19
SIPA1Q96FS4 Y_RNA.431-201ENST00000384086 102 ntBASIC1.36□□□□□ -2.19
SIPA1Q96FS4 RNU6-505P-201ENST00000384427 107 ntBASIC1.36□□□□□ -2.19
SIPA1Q96FS4 RNU6-376P-201ENST00000384731 106 ntBASIC1.36□□□□□ -2.19
SIPA1Q96FS4 MIR320A-201ENST00000385302 82 ntBASIC1.36□□□□□ -2.19
SIPA1Q96FS4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.36□□□□□ -2.19
SIPA1Q96FS4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.36□□□□□ -2.19
SIPA1Q96FS4 RNU6-1170P-201ENST00000515974 106 ntBASIC1.36□□□□□ -2.19
SIPA1Q96FS4 RNU6-1012P-201ENST00000516606 109 ntBASIC1.36□□□□□ -2.19
SIPA1Q96FS4 RNU2-56P-201ENST00000516826 190 ntBASIC1.36□□□□□ -2.19
SIPA1Q96FS4 RN7SKP88-201ENST00000516847 250 ntBASIC1.36□□□□□ -2.19
SIPA1Q96FS4 RNU7-4P-201ENST00000516961 62 ntBASIC1.36□□□□□ -2.19
SIPA1Q96FS4 AP002004.2-201ENST00000531656 154 ntBASIC1.36□□□□□ -2.19
SIPA1Q96FS4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.36□□□□□ -2.19
SIPA1Q96FS4 AC006600.1-201ENST00000572529 153 ntBASIC1.36□□□□□ -2.19
SIPA1Q96FS4 7SK.8-201ENST00000612110 250 ntBASIC1.36□□□□□ -2.19
SIPA1Q96FS4 7SK.11-201ENST00000615477 250 ntBASIC1.36□□□□□ -2.19
SIPA1Q96FS4 U2.1-201ENST00000618978 145 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 187.7 ms