Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC084781.2-201ENST00000615568 161 ntBASIC1.5□□□□□ -2.17
SKA1Q96BD8 AC240442.1-201ENST00000616055 283 ntBASIC1.5□□□□□ -2.17
SKA1Q96BD8 MIR8070-201ENST00000616510 88 ntBASIC1.5□□□□□ -2.17
SKA1Q96BD8 AC005592.1-201ENST00000566527 1640 ntBASIC1.49□□□□□ -2.17
SKA1Q96BD8 RNA5SP327-201ENST00000362494 101 ntBASIC1.49□□□□□ -2.17
SKA1Q96BD8 Y_RNA.27-201ENST00000362540 103 ntBASIC1.49□□□□□ -2.17
SKA1Q96BD8 SNORA2.2-201ENST00000365473 135 ntBASIC1.49□□□□□ -2.17
SKA1Q96BD8 RNU6-20P-201ENST00000384106 107 ntBASIC1.49□□□□□ -2.17
SKA1Q96BD8 MIR653-201ENST00000385279 96 ntBASIC1.49□□□□□ -2.17
SKA1Q96BD8 AL451046.2-201ENST00000403074 277 ntBASIC1.49□□□□□ -2.17
SKA1Q96BD8 AL031003.1-201ENST00000404229 172 ntBASIC1.49□□□□□ -2.17
SKA1Q96BD8 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.49□□□□□ -2.17
SKA1Q96BD8 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.49□□□□□ -2.17
SKA1Q96BD8 RNA5SP61-201ENST00000516453 100 ntBASIC1.49□□□□□ -2.17
SKA1Q96BD8 AC090049.2-201ENST00000550377 109 ntBASIC1.49□□□□□ -2.17
SKA1Q96BD8 MIR4659A-201ENST00000580269 81 ntBASIC1.49□□□□□ -2.17
SKA1Q96BD8 AC068647.2-201ENST00000637380 353 ntBASIC1.49□□□□□ -2.17
SKA1Q96BD8 RNU6-626P-201ENST00000363354 107 ntBASIC1.48□□□□□ -2.17
SKA1Q96BD8 RNU6-324P-201ENST00000363957 106 ntBASIC1.48□□□□□ -2.17
SKA1Q96BD8 RNU4-13P-201ENST00000364019 141 ntBASIC1.48□□□□□ -2.17
SKA1Q96BD8 Y_RNA.230-201ENST00000364348 109 ntBASIC1.48□□□□□ -2.17
SKA1Q96BD8 AL162725.1-201ENST00000435405 301 ntBASIC1.48□□□□□ -2.17
SKA1Q96BD8 FGF7P4-201ENST00000509595 295 ntBASIC1.48□□□□□ -2.17
SKA1Q96BD8 RNU6-1337P-201ENST00000516525 95 ntBASIC1.48□□□□□ -2.17
SKA1Q96BD8 AL355375.2-201ENST00000574825 175 ntBASIC1.48□□□□□ -2.17
SKA1Q96BD8 MIR7974-201ENST00000615835 79 ntBASIC1.48□□□□□ -2.17
SKA1Q96BD8 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
SKA1Q96BD8 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
SKA1Q96BD8 Y_RNA.101-201ENST00000363154 102 ntBASIC1.47□□□□□ -2.17
SKA1Q96BD8 Y_RNA.187-201ENST00000363918 113 ntBASIC1.47□□□□□ -2.17
SKA1Q96BD8 RNU6-392P-201ENST00000364926 101 ntBASIC1.47□□□□□ -2.17
SKA1Q96BD8 RNU6-1009P-201ENST00000390996 107 ntBASIC1.47□□□□□ -2.17
SKA1Q96BD8 MIR1304-201ENST00000408243 91 ntBASIC1.47□□□□□ -2.17
SKA1Q96BD8 RNA5SP511-201ENST00000410487 115 ntBASIC1.47□□□□□ -2.17
SKA1Q96BD8 AL354751.2-201ENST00000415471 210 ntBASIC1.47□□□□□ -2.17
SKA1Q96BD8 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.47□□□□□ -2.17
SKA1Q96BD8 AC236972.2-201ENST00000434979 310 ntBASIC1.47□□□□□ -2.17
SKA1Q96BD8 AC091951.2-201ENST00000500762 203 ntBASIC1.47□□□□□ -2.17
SKA1Q96BD8 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.47□□□□□ -2.17
SKA1Q96BD8 RNU6-155P-201ENST00000516347 100 ntBASIC1.47□□□□□ -2.17
SKA1Q96BD8 AC055872.1-201ENST00000570978 278 ntBASIC1.47□□□□□ -2.17
SKA1Q96BD8 AC006600.1-201ENST00000572529 153 ntBASIC1.47□□□□□ -2.17
SKA1Q96BD8 AL357312.1-201ENST00000603879 298 ntBASIC1.47□□□□□ -2.17
SKA1Q96BD8 AC138305.3-201ENST00000624988 240 ntBASIC1.47□□□□□ -2.17
SKA1Q96BD8 RNU6-939P-201ENST00000384634 107 ntBASIC1.46□□□□□ -2.18
SKA1Q96BD8 MIR150-201ENST00000385048 84 ntBASIC1.46□□□□□ -2.18
SKA1Q96BD8 MIR618-201ENST00000385287 98 ntBASIC1.46□□□□□ -2.18
SKA1Q96BD8 Y_RNA.621-201ENST00000411065 96 ntBASIC1.46□□□□□ -2.18
SKA1Q96BD8 AL354695.1-201ENST00000427935 228 ntBASIC1.46□□□□□ -2.18
SKA1Q96BD8 AC096644.2-201ENST00000429278 159 ntBASIC1.46□□□□□ -2.18
SKA1Q96BD8 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.46□□□□□ -2.18
SKA1Q96BD8 DYNLT3P2-201ENST00000442517 295 ntBASIC1.46□□□□□ -2.18
SKA1Q96BD8 Y_RNA.632-201ENST00000459189 102 ntBASIC1.46□□□□□ -2.18
SKA1Q96BD8 RNU6-165P-201ENST00000517170 99 ntBASIC1.46□□□□□ -2.18
SKA1Q96BD8 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.46□□□□□ -2.18
SKA1Q96BD8 AC008269.2-201ENST00000561915 1105 ntBASIC1.46□□□□□ -2.18
SKA1Q96BD8 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.46□□□□□ -2.18
SKA1Q96BD8 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.46□□□□□ -2.18
SKA1Q96BD8 AC011476.5-201ENST00000615594 130 ntBASIC1.46□□□□□ -2.18
SKA1Q96BD8 AL138825.1-201ENST00000618587 192 ntBASIC1.46□□□□□ -2.18
SKA1Q96BD8 AL353770.2-201ENST00000620024 78 ntBASIC1.46□□□□□ -2.18
SKA1Q96BD8 Y_RNA.146-201ENST00000363549 102 ntBASIC1.45□□□□□ -2.18
SKA1Q96BD8 RNU4-41P-201ENST00000364426 143 ntBASIC1.45□□□□□ -2.18
SKA1Q96BD8 Y_RNA.269-201ENST00000364685 89 ntBASIC1.45□□□□□ -2.18
SKA1Q96BD8 Y_RNA.446-201ENST00000384178 104 ntBASIC1.45□□□□□ -2.18
SKA1Q96BD8 RNU6-1105P-201ENST00000384774 107 ntBASIC1.45□□□□□ -2.18
SKA1Q96BD8 SNRPGP13-201ENST00000442212 177 ntBASIC1.45□□□□□ -2.18
SKA1Q96BD8 AC093850.1-201ENST00000454121 251 ntBASIC1.45□□□□□ -2.18
SKA1Q96BD8 RNU7-152P-201ENST00000458982 64 ntBASIC1.45□□□□□ -2.18
SKA1Q96BD8 RNU7-40P-201ENST00000516397 64 ntBASIC1.45□□□□□ -2.18
SKA1Q96BD8 RNU6-875P-201ENST00000516488 106 ntBASIC1.45□□□□□ -2.18
SKA1Q96BD8 MIR6078-201ENST00000611069 100 ntBASIC1.45□□□□□ -2.18
SKA1Q96BD8 Y_RNA.463-201ENST00000384271 102 ntBASIC1.44□□□□□ -2.18
SKA1Q96BD8 MIR891A-201ENST00000401237 79 ntBASIC1.44□□□□□ -2.18
SKA1Q96BD8 MIR1323-201ENST00000408090 73 ntBASIC1.44□□□□□ -2.18
SKA1Q96BD8 CHEK2P4-201ENST00000450340 246 ntBASIC1.44□□□□□ -2.18
SKA1Q96BD8 SNORD19B-201ENST00000459623 84 ntBASIC1.44□□□□□ -2.18
SKA1Q96BD8 CYCTP-201ENST00000504253 315 ntBASIC1.44□□□□□ -2.18
SKA1Q96BD8 AC022616.4-201ENST00000522985 181 ntBASIC1.44□□□□□ -2.18
SKA1Q96BD8 MIR4801-201ENST00000582704 82 ntBASIC1.44□□□□□ -2.18
SKA1Q96BD8 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.44□□□□□ -2.18
SKA1Q96BD8 U6.92-201ENST00000636464 89 ntBASIC1.44□□□□□ -2.18
SKA1Q96BD8 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.44□□□□□ -2.18
SKA1Q96BD8 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.44□□□□□ -2.18
SKA1Q96BD8 MIRLET7C-201ENST00000362160 84 ntBASIC1.43□□□□□ -2.18
SKA1Q96BD8 U8.1-201ENST00000362843 134 ntBASIC1.43□□□□□ -2.18
SKA1Q96BD8 Y_RNA.263-201ENST00000364659 114 ntBASIC1.43□□□□□ -2.18
SKA1Q96BD8 SNORA25-201ENST00000384384 134 ntBASIC1.43□□□□□ -2.18
SKA1Q96BD8 RNU2-61P-201ENST00000411069 191 ntBASIC1.43□□□□□ -2.18
SKA1Q96BD8 Z98949.2-201ENST00000440996 144 ntBASIC1.43□□□□□ -2.18
SKA1Q96BD8 MTND5P20-201ENST00000448677 143 ntBASIC1.43□□□□□ -2.18
SKA1Q96BD8 RPL39P39-201ENST00000455840 151 ntBASIC1.43□□□□□ -2.18
SKA1Q96BD8 SNORA31.4-201ENST00000516049 129 ntBASIC1.43□□□□□ -2.18
SKA1Q96BD8 RN7SKP295-201ENST00000517264 153 ntBASIC1.43□□□□□ -2.18
SKA1Q96BD8 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.43□□□□□ -2.18
SKA1Q96BD8 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SKA1Q96BD8 SNORD68-201ENST00000363214 84 ntBASIC1.42□□□□□ -2.18
SKA1Q96BD8 RNU6-833P-201ENST00000363486 107 ntBASIC1.42□□□□□ -2.18
SKA1Q96BD8 Y_RNA.303-201ENST00000364998 94 ntBASIC1.42□□□□□ -2.18
SKA1Q96BD8 Y_RNA.356-201ENST00000365475 113 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms