Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 Y_RNA.44-201ENST00000362676 108 ntBASIC2.31□□□□□ -2.04
HPS3Q969F9 RNU6-117P-201ENST00000365415 107 ntBASIC2.31□□□□□ -2.04
HPS3Q969F9 Y_RNA.352-201ENST00000365439 102 ntBASIC2.31□□□□□ -2.04
HPS3Q969F9 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.31□□□□□ -2.04
HPS3Q969F9 MIR562-201ENST00000384894 95 ntBASIC2.31□□□□□ -2.04
HPS3Q969F9 SNORA48.3-201ENST00000391081 134 ntBASIC2.31□□□□□ -2.04
HPS3Q969F9 Y_RNA.618-201ENST00000410949 107 ntBASIC2.31□□□□□ -2.04
HPS3Q969F9 AL356379.1-201ENST00000414105 126 ntBASIC2.31□□□□□ -2.04
HPS3Q969F9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.31□□□□□ -2.04
HPS3Q969F9 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.31□□□□□ -2.04
HPS3Q969F9 RPL36AP21-201ENST00000490372 323 ntBASIC2.31□□□□□ -2.04
HPS3Q969F9 RNU6-63P-201ENST00000516690 95 ntBASIC2.31□□□□□ -2.04
HPS3Q969F9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.31□□□□□ -2.04
HPS3Q969F9 Y_RNA.783-201ENST00000613546 102 ntBASIC2.31□□□□□ -2.04
HPS3Q969F9 MIR6132-201ENST00000622083 109 ntBASIC2.31□□□□□ -2.04
HPS3Q969F9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.31□□□□□ -2.04
HPS3Q969F9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
HPS3Q969F9 ZNF702P-202ENST00000434269 1966 ntBASIC2.3□□□□□ -2.04
HPS3Q969F9 Y_RNA.310-201ENST00000365063 113 ntBASIC2.3□□□□□ -2.04
HPS3Q969F9 Y_RNA.350-201ENST00000365409 98 ntBASIC2.3□□□□□ -2.04
HPS3Q969F9 RNU2-7P-201ENST00000410794 178 ntBASIC2.3□□□□□ -2.04
HPS3Q969F9 AL162725.1-201ENST00000435405 301 ntBASIC2.3□□□□□ -2.04
HPS3Q969F9 HSPE1P21-201ENST00000438283 308 ntBASIC2.3□□□□□ -2.04
HPS3Q969F9 RPS20P10-201ENST00000451209 253 ntBASIC2.3□□□□□ -2.04
HPS3Q969F9 AL021397.1-201ENST00000451806 248 ntBASIC2.3□□□□□ -2.04
HPS3Q969F9 RPS26P45-201ENST00000471748 340 ntBASIC2.3□□□□□ -2.04
HPS3Q969F9 RNU7-128P-201ENST00000517247 62 ntBASIC2.3□□□□□ -2.04
HPS3Q969F9 AC015712.3-201ENST00000559380 164 ntBASIC2.3□□□□□ -2.04
HPS3Q969F9 SUB1P4-201ENST00000566062 339 ntBASIC2.3□□□□□ -2.04
HPS3Q969F9 AC012433.1-201ENST00000588916 398 ntBASIC2.3□□□□□ -2.04
HPS3Q969F9 AC005972.2-201ENST00000604690 348 ntBASIC2.3□□□□□ -2.04
HPS3Q969F9 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.3□□□□□ -2.04
HPS3Q969F9 U2.14-201ENST00000615943 113 ntBASIC2.3□□□□□ -2.04
HPS3Q969F9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.3□□□□□ -2.04
HPS3Q969F9 U6.108-201ENST00000637764 58 ntBASIC2.3□□□□□ -2.04
HPS3Q969F9 AC018630.2-201ENST00000534866 2403 ntBASIC2.29□□□□□ -2.04
HPS3Q969F9 UBE2WP1-201ENST00000362030 340 ntBASIC2.29□□□□□ -2.04
HPS3Q969F9 SNORD114-1-201ENST00000362705 72 ntBASIC2.29□□□□□ -2.04
HPS3Q969F9 RNU4-52P-201ENST00000384209 138 ntBASIC2.29□□□□□ -2.04
HPS3Q969F9 RNU6-136P-201ENST00000384663 107 ntBASIC2.29□□□□□ -2.04
HPS3Q969F9 MIR520A-201ENST00000384862 85 ntBASIC2.29□□□□□ -2.04
HPS3Q969F9 MIR520G-201ENST00000385064 90 ntBASIC2.29□□□□□ -2.04
HPS3Q969F9 AL512604.1-201ENST00000404812 257 ntBASIC2.29□□□□□ -2.04
HPS3Q969F9 RNA5SP511-201ENST00000410487 115 ntBASIC2.29□□□□□ -2.04
HPS3Q969F9 RNU6-717P-201ENST00000459076 104 ntBASIC2.29□□□□□ -2.04
HPS3Q969F9 RNA5SP57-201ENST00000459463 123 ntBASIC2.29□□□□□ -2.04
HPS3Q969F9 MIR4287-201ENST00000579398 78 ntBASIC2.29□□□□□ -2.04
HPS3Q969F9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.29□□□□□ -2.04
HPS3Q969F9 AP000553.5-201ENST00000641933 54 ntBASIC2.29□□□□□ -2.04
HPS3Q969F9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
HPS3Q969F9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HPS3Q969F9 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
HPS3Q969F9 AC092881.1-201ENST00000638218 2733 ntBASIC2.28□□□□□ -2.04
HPS3Q969F9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HPS3Q969F9 RNA5SP276-201ENST00000362580 94 ntBASIC2.28□□□□□ -2.04
HPS3Q969F9 SNORD116-13-201ENST00000384408 92 ntBASIC2.28□□□□□ -2.04
HPS3Q969F9 MIR17-201ENST00000385012 84 ntBASIC2.28□□□□□ -2.04
HPS3Q969F9 RNU2-2P-201ENST00000410396 191 ntBASIC2.28□□□□□ -2.04
HPS3Q969F9 AL158823.1-201ENST00000418441 478 ntBASIC2.28□□□□□ -2.04
HPS3Q969F9 AL591806.2-201ENST00000433122 173 ntBASIC2.28□□□□□ -2.04
HPS3Q969F9 AC015720.1-201ENST00000565251 277 ntBASIC2.28□□□□□ -2.04
HPS3Q969F9 MIR4448-201ENST00000584360 86 ntBASIC2.28□□□□□ -2.04
HPS3Q969F9 AC004832.4-201ENST00000608952 331 ntBASIC2.28□□□□□ -2.04
HPS3Q969F9 MIR6079-201ENST00000635807 62 ntBASIC2.28□□□□□ -2.04
HPS3Q969F9 AC068647.2-201ENST00000637380 353 ntBASIC2.28□□□□□ -2.04
HPS3Q969F9 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HPS3Q969F9 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
HPS3Q969F9 Y_RNA.54-201ENST00000362766 105 ntBASIC2.27□□□□□ -2.05
HPS3Q969F9 Y_RNA.172-201ENST00000363765 102 ntBASIC2.27□□□□□ -2.05
HPS3Q969F9 SNORA16B-201ENST00000364674 135 ntBASIC2.27□□□□□ -2.05
HPS3Q969F9 Y_RNA.275-201ENST00000364726 110 ntBASIC2.27□□□□□ -2.05
HPS3Q969F9 RNU6-662P-201ENST00000384253 104 ntBASIC2.27□□□□□ -2.05
HPS3Q969F9 Y_RNA.478-201ENST00000384358 107 ntBASIC2.27□□□□□ -2.05
HPS3Q969F9 Y_RNA.562-201ENST00000384695 113 ntBASIC2.27□□□□□ -2.05
HPS3Q969F9 RNA5SP212-201ENST00000391223 107 ntBASIC2.27□□□□□ -2.05
HPS3Q969F9 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.27□□□□□ -2.05
HPS3Q969F9 AC245047.4-201ENST00000433189 144 ntBASIC2.27□□□□□ -2.05
HPS3Q969F9 RNU7-116P-201ENST00000516940 62 ntBASIC2.27□□□□□ -2.05
HPS3Q969F9 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.27□□□□□ -2.05
HPS3Q969F9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.27□□□□□ -2.05
HPS3Q969F9 AL078604.3-201ENST00000615580 211 ntBASIC2.27□□□□□ -2.05
HPS3Q969F9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
HPS3Q969F9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
HPS3Q969F9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
HPS3Q969F9 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.26□□□□□ -2.05
HPS3Q969F9 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HPS3Q969F9 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.26□□□□□ -2.05
HPS3Q969F9 MIR5089-201ENST00000580047 84 ntBASIC2.26□□□□□ -2.05
HPS3Q969F9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HPS3Q969F9 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.25□□□□□ -2.05
HPS3Q969F9 RNU6-112P-201ENST00000363599 104 ntBASIC2.25□□□□□ -2.05
HPS3Q969F9 RNU6-801P-201ENST00000364087 105 ntBASIC2.25□□□□□ -2.05
HPS3Q969F9 Y_RNA.416-201ENST00000384014 113 ntBASIC2.25□□□□□ -2.05
HPS3Q969F9 RNU6-1323P-201ENST00000384025 107 ntBASIC2.25□□□□□ -2.05
HPS3Q969F9 SNORA72.4-201ENST00000384174 132 ntBASIC2.25□□□□□ -2.05
HPS3Q969F9 RNU6-950P-201ENST00000384651 107 ntBASIC2.25□□□□□ -2.05
HPS3Q969F9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
HPS3Q969F9 AL603910.2-201ENST00000407268 136 ntBASIC2.25□□□□□ -2.05
HPS3Q969F9 MIR1289-2-201ENST00000408360 111 ntBASIC2.25□□□□□ -2.05
HPS3Q969F9 AC091021.1-201ENST00000468051 388 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms