Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 MIR1253-201ENST00000408273 105 ntBASIC2.93□□□□□ -1.94
BRF1Q92994 RNU6-257P-201ENST00000410238 98 ntBASIC2.93□□□□□ -1.94
BRF1Q92994 RPL30P13-201ENST00000418873 348 ntBASIC2.93□□□□□ -1.94
BRF1Q92994 RPS4XP11-201ENST00000446897 772 ntBASIC2.93□□□□□ -1.94
BRF1Q92994 AC245102.2-201ENST00000448956 180 ntBASIC2.93□□□□□ -1.94
BRF1Q92994 SNRPGP8-201ENST00000454064 226 ntBASIC2.93□□□□□ -1.94
BRF1Q92994 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.93□□□□□ -1.94
BRF1Q92994 RNU6-667P-201ENST00000517186 102 ntBASIC2.93□□□□□ -1.94
BRF1Q92994 MIR2681-201ENST00000581814 105 ntBASIC2.93□□□□□ -1.94
BRF1Q92994 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.93□□□□□ -1.94
BRF1Q92994 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.93□□□□□ -1.94
BRF1Q92994 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
BRF1Q92994 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.93□□□□□ -1.94
BRF1Q92994 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
BRF1Q92994 RNA5SP456-201ENST00000364002 114 ntBASIC2.92□□□□□ -1.94
BRF1Q92994 RNA5SP125-201ENST00000364843 120 ntBASIC2.92□□□□□ -1.94
BRF1Q92994 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.92□□□□□ -1.94
BRF1Q92994 AL353689.1-201ENST00000438895 199 ntBASIC2.92□□□□□ -1.94
BRF1Q92994 AL445687.1-201ENST00000439946 251 ntBASIC2.92□□□□□ -1.94
BRF1Q92994 AL160236.1-201ENST00000556317 195 ntBASIC2.92□□□□□ -1.94
BRF1Q92994 AL929325.1-201ENST00000603096 117 ntBASIC2.92□□□□□ -1.94
BRF1Q92994 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
BRF1Q92994 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
BRF1Q92994 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
BRF1Q92994 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
BRF1Q92994 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
BRF1Q92994 SNORD45.3-201ENST00000363836 72 ntBASIC2.91□□□□□ -1.94
BRF1Q92994 RNU6-22P-201ENST00000384355 107 ntBASIC2.91□□□□□ -1.94
BRF1Q92994 RPS27P1-201ENST00000450552 247 ntBASIC2.91□□□□□ -1.94
BRF1Q92994 AC011406.1-201ENST00000512440 370 ntBASIC2.91□□□□□ -1.94
BRF1Q92994 RNU6-479P-201ENST00000516348 105 ntBASIC2.91□□□□□ -1.94
BRF1Q92994 AC112693.2-201ENST00000556538 232 ntBASIC2.91□□□□□ -1.94
BRF1Q92994 AL353149.1-201ENST00000610667 244 ntBASIC2.91□□□□□ -1.94
BRF1Q92994 RNU6-199P-201ENST00000362954 107 ntBASIC2.9□□□□□ -1.95
BRF1Q92994 Y_RNA.99-201ENST00000363138 105 ntBASIC2.9□□□□□ -1.95
BRF1Q92994 Y_RNA.203-201ENST00000364106 102 ntBASIC2.9□□□□□ -1.95
BRF1Q92994 Y_RNA.393-201ENST00000383936 102 ntBASIC2.9□□□□□ -1.95
BRF1Q92994 RNU6-136P-201ENST00000384663 107 ntBASIC2.9□□□□□ -1.95
BRF1Q92994 SNORA40-201ENST00000388090 126 ntBASIC2.9□□□□□ -1.95
BRF1Q92994 Y_RNA.587-201ENST00000391210 103 ntBASIC2.9□□□□□ -1.95
BRF1Q92994 HMGN2P34-201ENST00000437647 269 ntBASIC2.9□□□□□ -1.95
BRF1Q92994 RPS12P2-201ENST00000439728 269 ntBASIC2.9□□□□□ -1.95
BRF1Q92994 RNU7-197P-201ENST00000458836 62 ntBASIC2.9□□□□□ -1.95
BRF1Q92994 RNU1-131P-201ENST00000458943 161 ntBASIC2.9□□□□□ -1.95
BRF1Q92994 RPS29P21-201ENST00000496272 170 ntBASIC2.9□□□□□ -1.95
BRF1Q92994 RNU6-62P-201ENST00000516526 102 ntBASIC2.9□□□□□ -1.95
BRF1Q92994 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.9□□□□□ -1.95
BRF1Q92994 MIR6073-201ENST00000352083 89 ntBASIC2.89□□□□□ -1.95
BRF1Q92994 snoU2-30.2-201ENST00000362805 70 ntBASIC2.89□□□□□ -1.95
BRF1Q92994 RNA5SP68-201ENST00000363885 119 ntBASIC2.89□□□□□ -1.95
BRF1Q92994 RNU6-597P-201ENST00000365620 102 ntBASIC2.89□□□□□ -1.95
BRF1Q92994 RNU6-768P-201ENST00000384683 107 ntBASIC2.89□□□□□ -1.95
BRF1Q92994 RNU11-5P-201ENST00000391216 129 ntBASIC2.89□□□□□ -1.95
BRF1Q92994 RNU2-51P-201ENST00000410708 197 ntBASIC2.89□□□□□ -1.95
BRF1Q92994 RNA5SP492-201ENST00000411330 114 ntBASIC2.89□□□□□ -1.95
BRF1Q92994 AL049873.1-201ENST00000480540 376 ntBASIC2.89□□□□□ -1.95
BRF1Q92994 SNORA25.12-201ENST00000516202 82 ntBASIC2.89□□□□□ -1.95
BRF1Q92994 RNU7-99P-201ENST00000516271 62 ntBASIC2.89□□□□□ -1.95
BRF1Q92994 RNA5SP148-201ENST00000516527 94 ntBASIC2.89□□□□□ -1.95
BRF1Q92994 AC011604.1-201ENST00000545978 196 ntBASIC2.89□□□□□ -1.95
BRF1Q92994 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.89□□□□□ -1.95
BRF1Q92994 MIR6817-201ENST00000615588 66 ntBASIC2.89□□□□□ -1.95
BRF1Q92994 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.88□□□□□ -1.95
BRF1Q92994 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
BRF1Q92994 RNU6-484P-201ENST00000384016 107 ntBASIC2.88□□□□□ -1.95
BRF1Q92994 MIR520G-201ENST00000385064 90 ntBASIC2.88□□□□□ -1.95
BRF1Q92994 SNORA79-201ENST00000408376 140 ntBASIC2.88□□□□□ -1.95
BRF1Q92994 Y_RNA.622-201ENST00000411091 108 ntBASIC2.88□□□□□ -1.95
BRF1Q92994 AC092427.1-202ENST00000430569 476 ntBASIC2.88□□□□□ -1.95
BRF1Q92994 AC009238.1-201ENST00000442165 424 ntBASIC2.88□□□□□ -1.95
BRF1Q92994 AC009237.6-201ENST00000446969 424 ntBASIC2.88□□□□□ -1.95
BRF1Q92994 RNA5SP272-201ENST00000516095 111 ntBASIC2.88□□□□□ -1.95
BRF1Q92994 RNU6-197P-201ENST00000516680 100 ntBASIC2.88□□□□□ -1.95
BRF1Q92994 MIR378D2-201ENST00000580636 98 ntBASIC2.88□□□□□ -1.95
BRF1Q92994 U4.3-201ENST00000621047 82 ntBASIC2.88□□□□□ -1.95
BRF1Q92994 AC010297.1-201ENST00000623948 149 ntBASIC2.88□□□□□ -1.95
BRF1Q92994 MIR6844-201ENST00000637122 62 ntBASIC2.88□□□□□ -1.95
BRF1Q92994 AC100821.1-201ENST00000523153 2479 ntBASIC2.88□□□□□ -1.95
BRF1Q92994 ZNF702P-202ENST00000434269 1966 ntBASIC2.88□□□□□ -1.95
BRF1Q92994 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
BRF1Q92994 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
BRF1Q92994 Y_RNA.521-201ENST00000384560 114 ntBASIC2.87□□□□□ -1.95
BRF1Q92994 RNU6-417P-201ENST00000384712 107 ntBASIC2.87□□□□□ -1.95
BRF1Q92994 SNORD37.2-201ENST00000391075 66 ntBASIC2.87□□□□□ -1.95
BRF1Q92994 HMGN2P35-201ENST00000412164 270 ntBASIC2.87□□□□□ -1.95
BRF1Q92994 EDDM3CP-201ENST00000415977 425 ntBASIC2.87□□□□□ -1.95
BRF1Q92994 MTND4LP9-201ENST00000427694 174 ntBASIC2.87□□□□□ -1.95
BRF1Q92994 RNU6-56P-201ENST00000516986 93 ntBASIC2.87□□□□□ -1.95
BRF1Q92994 RNU7-128P-201ENST00000517247 62 ntBASIC2.87□□□□□ -1.95
BRF1Q92994 AC007229.1-201ENST00000590455 412 ntBASIC2.87□□□□□ -1.95
BRF1Q92994 uc_338.4-201ENST00000616635 176 ntBASIC2.87□□□□□ -1.95
BRF1Q92994 MIR338-201ENST00000636369 67 ntBASIC2.87□□□□□ -1.95
BRF1Q92994 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.86□□□□□ -1.95
BRF1Q92994 Y_RNA.796-201ENST00000364268 102 ntBASIC2.86□□□□□ -1.95
BRF1Q92994 Y_RNA.799-201ENST00000364992 102 ntBASIC2.86□□□□□ -1.95
BRF1Q92994 RNA5SP181-201ENST00000410246 98 ntBASIC2.86□□□□□ -1.95
BRF1Q92994 RN7SKP284-201ENST00000411002 343 ntBASIC2.86□□□□□ -1.95
BRF1Q92994 Z96811.1-201ENST00000445880 108 ntBASIC2.86□□□□□ -1.95
BRF1Q92994 SNORD11-201ENST00000459124 84 ntBASIC2.86□□□□□ -1.95
BRF1Q92994 SNORD77.4-201ENST00000516158 81 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms