Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 AL031003.1-201ENST00000404229 172 ntBASIC1.26□□□□□ -2.21
CKAP2Q8WWK9 RNU2-54P-201ENST00000410299 190 ntBASIC1.26□□□□□ -2.21
CKAP2Q8WWK9 RNA5SP511-201ENST00000410487 115 ntBASIC1.26□□□□□ -2.21
CKAP2Q8WWK9 RNU5A-5P-201ENST00000411054 116 ntBASIC1.26□□□□□ -2.21
CKAP2Q8WWK9 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.26□□□□□ -2.21
CKAP2Q8WWK9 RPEP5-201ENST00000441137 268 ntBASIC1.26□□□□□ -2.21
CKAP2Q8WWK9 RNU1-123P-201ENST00000458950 160 ntBASIC1.26□□□□□ -2.21
CKAP2Q8WWK9 RNU7-95P-201ENST00000459222 64 ntBASIC1.26□□□□□ -2.21
CKAP2Q8WWK9 AL049830.1-201ENST00000468034 425 ntBASIC1.26□□□□□ -2.21
CKAP2Q8WWK9 Y_RNA.661-201ENST00000516003 99 ntBASIC1.26□□□□□ -2.21
CKAP2Q8WWK9 SNORA70.12-201ENST00000516084 153 ntBASIC1.26□□□□□ -2.21
CKAP2Q8WWK9 RNU6-155P-201ENST00000516347 100 ntBASIC1.26□□□□□ -2.21
CKAP2Q8WWK9 RNU6-922P-201ENST00000516753 99 ntBASIC1.26□□□□□ -2.21
CKAP2Q8WWK9 RNU7-28P-201ENST00000516759 62 ntBASIC1.26□□□□□ -2.21
CKAP2Q8WWK9 AL161670.1-201ENST00000554348 137 ntBASIC1.26□□□□□ -2.21
CKAP2Q8WWK9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CKAP2Q8WWK9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CKAP2Q8WWK9 Y_RNA.27-201ENST00000362540 103 ntBASIC1.25□□□□□ -2.21
CKAP2Q8WWK9 RNA5SP482-201ENST00000391269 118 ntBASIC1.25□□□□□ -2.21
CKAP2Q8WWK9 AC236972.2-201ENST00000434979 310 ntBASIC1.25□□□□□ -2.21
CKAP2Q8WWK9 DYNLT3P2-201ENST00000442517 295 ntBASIC1.25□□□□□ -2.21
CKAP2Q8WWK9 AC093850.1-201ENST00000454121 251 ntBASIC1.25□□□□□ -2.21
CKAP2Q8WWK9 RNU7-152P-201ENST00000458982 64 ntBASIC1.25□□□□□ -2.21
CKAP2Q8WWK9 AL163540.1-201ENST00000485382 386 ntBASIC1.25□□□□□ -2.21
CKAP2Q8WWK9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.25□□□□□ -2.21
CKAP2Q8WWK9 RNU7-12P-201ENST00000516030 62 ntBASIC1.25□□□□□ -2.21
CKAP2Q8WWK9 RNU6-1337P-201ENST00000516525 95 ntBASIC1.25□□□□□ -2.21
CKAP2Q8WWK9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.25□□□□□ -2.21
CKAP2Q8WWK9 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.25□□□□□ -2.21
CKAP2Q8WWK9 AC019288.1-201ENST00000557918 224 ntBASIC1.25□□□□□ -2.21
CKAP2Q8WWK9 MIR4498-201ENST00000577599 66 ntBASIC1.25□□□□□ -2.21
CKAP2Q8WWK9 MIR8065-201ENST00000620577 100 ntBASIC1.25□□□□□ -2.21
CKAP2Q8WWK9 AC104985.2-201ENST00000620598 500 ntBASIC1.25□□□□□ -2.21
CKAP2Q8WWK9 AC068647.2-201ENST00000637380 353 ntBASIC1.25□□□□□ -2.21
CKAP2Q8WWK9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CKAP2Q8WWK9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.25□□□□□ -2.21
CKAP2Q8WWK9 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
CKAP2Q8WWK9 RNA5SP327-201ENST00000362494 101 ntBASIC1.24□□□□□ -2.21
CKAP2Q8WWK9 RNU6-199P-201ENST00000362954 107 ntBASIC1.24□□□□□ -2.21
CKAP2Q8WWK9 Y_RNA.361-201ENST00000365515 120 ntBASIC1.24□□□□□ -2.21
CKAP2Q8WWK9 Y_RNA.446-201ENST00000384178 104 ntBASIC1.24□□□□□ -2.21
CKAP2Q8WWK9 RNY3P14-201ENST00000384309 102 ntBASIC1.24□□□□□ -2.21
CKAP2Q8WWK9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.24□□□□□ -2.21
CKAP2Q8WWK9 Y_RNA.621-201ENST00000411065 96 ntBASIC1.24□□□□□ -2.21
CKAP2Q8WWK9 AL354751.2-201ENST00000415471 210 ntBASIC1.24□□□□□ -2.21
CKAP2Q8WWK9 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.24□□□□□ -2.21
CKAP2Q8WWK9 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.24□□□□□ -2.21
CKAP2Q8WWK9 Y_RNA.804-201ENST00000615262 101 ntBASIC1.24□□□□□ -2.21
CKAP2Q8WWK9 MIR4272-201ENST00000635924 64 ntBASIC1.24□□□□□ -2.21
CKAP2Q8WWK9 RNU6-1115P-201ENST00000362490 106 ntBASIC1.23□□□□□ -2.21
CKAP2Q8WWK9 RNU4-41P-201ENST00000364426 143 ntBASIC1.23□□□□□ -2.21
CKAP2Q8WWK9 SNORA25.8-201ENST00000364831 128 ntBASIC1.23□□□□□ -2.21
CKAP2Q8WWK9 Y_RNA.496-201ENST00000384444 101 ntBASIC1.23□□□□□ -2.21
CKAP2Q8WWK9 RNU6-939P-201ENST00000384634 107 ntBASIC1.23□□□□□ -2.21
CKAP2Q8WWK9 MIR618-201ENST00000385287 98 ntBASIC1.23□□□□□ -2.21
CKAP2Q8WWK9 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.23□□□□□ -2.21
CKAP2Q8WWK9 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.23□□□□□ -2.21
CKAP2Q8WWK9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.23□□□□□ -2.21
CKAP2Q8WWK9 AC092447.9-201ENST00000603395 144 ntBASIC1.23□□□□□ -2.21
CKAP2Q8WWK9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CKAP2Q8WWK9 SNORD116-13-201ENST00000384408 92 ntBASIC1.22□□□□□ -2.21
CKAP2Q8WWK9 RNU6-1199P-201ENST00000411249 104 ntBASIC1.22□□□□□ -2.21
CKAP2Q8WWK9 AL162725.1-201ENST00000435405 301 ntBASIC1.22□□□□□ -2.21
CKAP2Q8WWK9 Z98949.2-201ENST00000440996 144 ntBASIC1.22□□□□□ -2.21
CKAP2Q8WWK9 HSPE1P13-201ENST00000451143 297 ntBASIC1.22□□□□□ -2.21
CKAP2Q8WWK9 AC004223.1-201ENST00000479840 271 ntBASIC1.22□□□□□ -2.21
CKAP2Q8WWK9 RNU6-1053P-201ENST00000515930 101 ntBASIC1.22□□□□□ -2.21
CKAP2Q8WWK9 RNU6-966P-201ENST00000516479 104 ntBASIC1.22□□□□□ -2.21
CKAP2Q8WWK9 AL513534.2-201ENST00000603836 250 ntBASIC1.22□□□□□ -2.21
CKAP2Q8WWK9 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.22□□□□□ -2.21
CKAP2Q8WWK9 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.21□□□□□ -2.22
CKAP2Q8WWK9 SNORA7.1-201ENST00000363750 139 ntBASIC1.21□□□□□ -2.22
CKAP2Q8WWK9 RNU6-1080P-201ENST00000383982 107 ntBASIC1.21□□□□□ -2.22
CKAP2Q8WWK9 MIR1285-1-201ENST00000408593 84 ntBASIC1.21□□□□□ -2.22
CKAP2Q8WWK9 RPS4XP11-201ENST00000446897 772 ntBASIC1.21□□□□□ -2.22
CKAP2Q8WWK9 RNU6-165P-201ENST00000517170 99 ntBASIC1.21□□□□□ -2.22
CKAP2Q8WWK9 RNU6-1116P-201ENST00000517269 99 ntBASIC1.21□□□□□ -2.22
CKAP2Q8WWK9 AL358944.1-201ENST00000528537 144 ntBASIC1.21□□□□□ -2.22
CKAP2Q8WWK9 MIR4421-201ENST00000578133 69 ntBASIC1.21□□□□□ -2.22
CKAP2Q8WWK9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
CKAP2Q8WWK9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.2□□□□□ -2.22
CKAP2Q8WWK9 AL391987.6-201ENST00000305671 199 ntBASIC1.2□□□□□ -2.22
CKAP2Q8WWK9 MIRLET7C-201ENST00000362160 84 ntBASIC1.2□□□□□ -2.22
CKAP2Q8WWK9 Y_RNA.39-201ENST00000362620 98 ntBASIC1.2□□□□□ -2.22
CKAP2Q8WWK9 RNU4-73P-201ENST00000363164 141 ntBASIC1.2□□□□□ -2.22
CKAP2Q8WWK9 SNORD68-201ENST00000363214 84 ntBASIC1.2□□□□□ -2.22
CKAP2Q8WWK9 Y_RNA.172-201ENST00000363765 102 ntBASIC1.2□□□□□ -2.22
CKAP2Q8WWK9 Y_RNA.230-201ENST00000364348 109 ntBASIC1.2□□□□□ -2.22
CKAP2Q8WWK9 RNU6-1175P-201ENST00000365200 107 ntBASIC1.2□□□□□ -2.22
CKAP2Q8WWK9 RNU2-61P-201ENST00000411069 191 ntBASIC1.2□□□□□ -2.22
CKAP2Q8WWK9 AF228730.4-201ENST00000421457 183 ntBASIC1.2□□□□□ -2.22
CKAP2Q8WWK9 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.2□□□□□ -2.22
CKAP2Q8WWK9 MTND3P22-201ENST00000510932 243 ntBASIC1.2□□□□□ -2.22
CKAP2Q8WWK9 RNU6-436P-201ENST00000516171 114 ntBASIC1.2□□□□□ -2.22
CKAP2Q8WWK9 MIR4795-201ENST00000584182 89 ntBASIC1.2□□□□□ -2.22
CKAP2Q8WWK9 MIR3660-201ENST00000584845 100 ntBASIC1.2□□□□□ -2.22
CKAP2Q8WWK9 SNORA70.7-201ENST00000384159 133 ntBASIC1.19□□□□□ -2.22
CKAP2Q8WWK9 SNORA40.6-201ENST00000391153 128 ntBASIC1.19□□□□□ -2.22
CKAP2Q8WWK9 MTND1P14-201ENST00000427400 950 ntBASIC1.19□□□□□ -2.22
CKAP2Q8WWK9 AC104332.1-201ENST00000440471 797 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 215.6 ms