Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL590240.4-201ENST00000616908 390 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 AC073349.3-201ENST00000617616 186 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 SNORD98-201ENST00000636377 67 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2□□□□□ -2.09
SNED1Q8TER0 Y_RNA.101-201ENST00000363154 102 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 RNU6-529P-201ENST00000363383 104 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 RNU6-727P-201ENST00000363592 107 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 Y_RNA.233-201ENST00000364407 101 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 RNU6-923P-201ENST00000364753 107 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 RNU6-60P-201ENST00000364792 103 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 AL355497.1-201ENST00000406262 551 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 RNA5SP489-201ENST00000410986 109 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2□□□□□ -2.09
SNED1Q8TER0 AL606753.1-201ENST00000427435 87 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 AC009237.7-201ENST00000447357 229 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2□□□□□ -2.09
SNED1Q8TER0 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2□□□□□ -2.09
SNED1Q8TER0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2□□□□□ -2.09
SNED1Q8TER0 RNU5F-2P-201ENST00000516066 82 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2□□□□□ -2.09
SNED1Q8TER0 MIR6840-201ENST00000611937 71 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 RMST_2.1-201ENST00000617263 136 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 AC021753.1-201ENST00000635724 168 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.99□□□□□ -2.09
SNED1Q8TER0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
SNED1Q8TER0 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SNED1Q8TER0 Y_RNA.327-201ENST00000365201 102 ntBASIC1.99□□□□□ -2.09
SNED1Q8TER0 RNU6-245P-201ENST00000384020 107 ntBASIC1.99□□□□□ -2.09
SNED1Q8TER0 RNU6-918P-201ENST00000391219 106 ntBASIC1.99□□□□□ -2.09
SNED1Q8TER0 MTCO2P33-201ENST00000402100 465 ntBASIC1.99□□□□□ -2.09
SNED1Q8TER0 CBX3P9-201ENST00000402326 552 ntBASIC1.99□□□□□ -2.09
SNED1Q8TER0 Y_RNA.597-201ENST00000410463 100 ntBASIC1.99□□□□□ -2.09
SNED1Q8TER0 ELOCP21-201ENST00000412558 336 ntBASIC1.99□□□□□ -2.09
SNED1Q8TER0 RAB28P5-201ENST00000427490 651 ntBASIC1.99□□□□□ -2.09
SNED1Q8TER0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.99□□□□□ -2.09
SNED1Q8TER0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.99□□□□□ -2.09
SNED1Q8TER0 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.99□□□□□ -2.09
SNED1Q8TER0 MRPS18CP4-201ENST00000535821 231 ntBASIC1.99□□□□□ -2.09
SNED1Q8TER0 AL355297.2-201ENST00000604792 129 ntBASIC1.99□□□□□ -2.09
SNED1Q8TER0 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.99□□□□□ -2.09
SNED1Q8TER0 AC091932.3-201ENST00000624223 323 ntBASIC1.99□□□□□ -2.09
SNED1Q8TER0 U6.106-201ENST00000636360 105 ntBASIC1.99□□□□□ -2.09
SNED1Q8TER0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
SNED1Q8TER0 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
SNED1Q8TER0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.98□□□□□ -2.09
SNED1Q8TER0 Y_RNA.8-201ENST00000362353 102 ntBASIC1.98□□□□□ -2.09
SNED1Q8TER0 BX510359.4-201ENST00000423750 193 ntBASIC1.98□□□□□ -2.09
SNED1Q8TER0 AC091179.3-201ENST00000474761 144 ntBASIC1.98□□□□□ -2.09
SNED1Q8TER0 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.98□□□□□ -2.09
SNED1Q8TER0 RNU6-155P-201ENST00000516347 100 ntBASIC1.98□□□□□ -2.09
SNED1Q8TER0 RNU6-966P-201ENST00000516479 104 ntBASIC1.98□□□□□ -2.09
SNED1Q8TER0 AP005660.1-201ENST00000522972 293 ntBASIC1.98□□□□□ -2.09
SNED1Q8TER0 MIR3145-201ENST00000580727 82 ntBASIC1.98□□□□□ -2.09
SNED1Q8TER0 MIR5694-201ENST00000581190 76 ntBASIC1.98□□□□□ -2.09
SNED1Q8TER0 MIR6504-201ENST00000613520 61 ntBASIC1.98□□□□□ -2.09
SNED1Q8TER0 snoU18.1-201ENST00000629629 71 ntBASIC1.98□□□□□ -2.09
SNED1Q8TER0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.98□□□□□ -2.09
SNED1Q8TER0 RNU1-62P-201ENST00000362599 164 ntBASIC1.97□□□□□ -2.09
SNED1Q8TER0 SNORD114-19-201ENST00000363072 75 ntBASIC1.97□□□□□ -2.09
SNED1Q8TER0 RNU4-80P-201ENST00000363200 141 ntBASIC1.97□□□□□ -2.09
SNED1Q8TER0 Y_RNA.170-201ENST00000363746 110 ntBASIC1.97□□□□□ -2.09
SNED1Q8TER0 Y_RNA.262-201ENST00000364641 102 ntBASIC1.97□□□□□ -2.09
SNED1Q8TER0 RNU6-53P-201ENST00000365367 106 ntBASIC1.97□□□□□ -2.09
SNED1Q8TER0 RNU6-211P-201ENST00000384047 107 ntBASIC1.97□□□□□ -2.09
SNED1Q8TER0 MIR613-201ENST00000385248 95 ntBASIC1.97□□□□□ -2.09
SNED1Q8TER0 SUMO2P12-201ENST00000405924 140 ntBASIC1.97□□□□□ -2.09
SNED1Q8TER0 RNU6-1199P-201ENST00000411249 104 ntBASIC1.97□□□□□ -2.09
SNED1Q8TER0 SNORD2.1-201ENST00000458762 69 ntBASIC1.97□□□□□ -2.09
SNED1Q8TER0 AC091021.1-201ENST00000468051 388 ntBASIC1.97□□□□□ -2.09
SNED1Q8TER0 AL121594.1-201ENST00000475906 575 ntBASIC1.97□□□□□ -2.09
SNED1Q8TER0 RNU6-107P-201ENST00000516643 102 ntBASIC1.97□□□□□ -2.09
SNED1Q8TER0 MIR4421-201ENST00000578133 69 ntBASIC1.97□□□□□ -2.09
SNED1Q8TER0 AC006380.1-201ENST00000603598 186 ntBASIC1.97□□□□□ -2.09
SNED1Q8TER0 AC104465.1-201ENST00000611365 139 ntBASIC1.97□□□□□ -2.09
SNED1Q8TER0 AC005520.5-201ENST00000613926 164 ntBASIC1.97□□□□□ -2.09
SNED1Q8TER0 AL365265.1-201ENST00000621045 234 ntBASIC1.97□□□□□ -2.09
SNED1Q8TER0 MIR3674-201ENST00000636576 68 ntBASIC1.97□□□□□ -2.09
SNED1Q8TER0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.97□□□□□ -2.09
SNED1Q8TER0 AC132825.6-201ENST00000638861 357 ntBASIC1.97□□□□□ -2.09
SNED1Q8TER0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SNED1Q8TER0 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
SNED1Q8TER0 RNU1-42P-201ENST00000364033 160 ntBASIC1.96□□□□□ -2.1
SNED1Q8TER0 Y_RNA.217-201ENST00000364214 105 ntBASIC1.96□□□□□ -2.1
SNED1Q8TER0 Y_RNA.240-201ENST00000364469 95 ntBASIC1.96□□□□□ -2.1
SNED1Q8TER0 RNU1-148P-201ENST00000384472 162 ntBASIC1.96□□□□□ -2.1
SNED1Q8TER0 MIR144-201ENST00000384886 86 ntBASIC1.96□□□□□ -2.1
SNED1Q8TER0 SNORA40.19-201ENST00000390846 128 ntBASIC1.96□□□□□ -2.1
SNED1Q8TER0 RNU6-1248P-201ENST00000391096 64 ntBASIC1.96□□□□□ -2.1
SNED1Q8TER0 RNU2-54P-201ENST00000410299 190 ntBASIC1.96□□□□□ -2.1
SNED1Q8TER0 Y_RNA.641-201ENST00000459414 105 ntBASIC1.96□□□□□ -2.1
SNED1Q8TER0 RNU6-346P-201ENST00000516288 111 ntBASIC1.96□□□□□ -2.1
SNED1Q8TER0 RNU6-191P-201ENST00000516295 94 ntBASIC1.96□□□□□ -2.1
SNED1Q8TER0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.96□□□□□ -2.1
SNED1Q8TER0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.96□□□□□ -2.1
SNED1Q8TER0 MIR3126-201ENST00000577443 74 ntBASIC1.96□□□□□ -2.1
SNED1Q8TER0 AL034555.1-201ENST00000604816 211 ntBASIC1.96□□□□□ -2.1
SNED1Q8TER0 PCGEM1.1-201ENST00000613431 131 ntBASIC1.96□□□□□ -2.1
SNED1Q8TER0 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 982.7 ms