Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.86□□□□□ -2.11
BEST2Q8NFU1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.86□□□□□ -2.11
BEST2Q8NFU1 AC084364.2-201ENST00000546924 395 ntBASIC1.86□□□□□ -2.11
BEST2Q8NFU1 SUB1P4-201ENST00000566062 339 ntBASIC1.86□□□□□ -2.11
BEST2Q8NFU1 MIR3122-201ENST00000577243 73 ntBASIC1.86□□□□□ -2.11
BEST2Q8NFU1 MIR502-201ENST00000606349 86 ntBASIC1.86□□□□□ -2.11
BEST2Q8NFU1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
BEST2Q8NFU1 Y_RNA.176-201ENST00000363815 109 ntBASIC1.85□□□□□ -2.11
BEST2Q8NFU1 RNU6-1019P-201ENST00000364424 107 ntBASIC1.85□□□□□ -2.11
BEST2Q8NFU1 Y_RNA.541-201ENST00000384640 113 ntBASIC1.85□□□□□ -2.11
BEST2Q8NFU1 AL512604.1-201ENST00000404812 257 ntBASIC1.85□□□□□ -2.11
BEST2Q8NFU1 RNA5SP100-201ENST00000410903 110 ntBASIC1.85□□□□□ -2.11
BEST2Q8NFU1 RNA5SP59-201ENST00000410922 110 ntBASIC1.85□□□□□ -2.11
BEST2Q8NFU1 RNU2-61P-201ENST00000411069 191 ntBASIC1.85□□□□□ -2.11
BEST2Q8NFU1 AL158823.1-201ENST00000418441 478 ntBASIC1.85□□□□□ -2.11
BEST2Q8NFU1 SNORD13-201ENST00000459299 104 ntBASIC1.85□□□□□ -2.11
BEST2Q8NFU1 AL163195.1-201ENST00000496941 348 ntBASIC1.85□□□□□ -2.11
BEST2Q8NFU1 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.85□□□□□ -2.11
BEST2Q8NFU1 RNU7-99P-201ENST00000516271 62 ntBASIC1.85□□□□□ -2.11
BEST2Q8NFU1 RNU6-63P-201ENST00000516690 95 ntBASIC1.85□□□□□ -2.11
BEST2Q8NFU1 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.85□□□□□ -2.11
BEST2Q8NFU1 AC073413.2-201ENST00000604332 360 ntBASIC1.85□□□□□ -2.11
BEST2Q8NFU1 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.85□□□□□ -2.11
BEST2Q8NFU1 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.85□□□□□ -2.11
BEST2Q8NFU1 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.85□□□□□ -2.11
BEST2Q8NFU1 AC127459.3-201ENST00000624328 466 ntBASIC1.85□□□□□ -2.11
BEST2Q8NFU1 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.85□□□□□ -2.11
BEST2Q8NFU1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.85□□□□□ -2.11
BEST2Q8NFU1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
BEST2Q8NFU1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
BEST2Q8NFU1 SNORD114-7-201ENST00000362520 77 ntBASIC1.84□□□□□ -2.11
BEST2Q8NFU1 Y_RNA.47-201ENST00000362697 108 ntBASIC1.84□□□□□ -2.11
BEST2Q8NFU1 Y_RNA.84-201ENST00000363011 104 ntBASIC1.84□□□□□ -2.11
BEST2Q8NFU1 HMGN2P19-201ENST00000425149 265 ntBASIC1.84□□□□□ -2.11
BEST2Q8NFU1 RNU6-1337P-201ENST00000516525 95 ntBASIC1.84□□□□□ -2.11
BEST2Q8NFU1 AC024995.1-201ENST00000523014 93 ntBASIC1.84□□□□□ -2.11
BEST2Q8NFU1 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.84□□□□□ -2.11
BEST2Q8NFU1 AC008555.8-201ENST00000623602 2168 ntBASIC1.83□□□□□ -2.12
BEST2Q8NFU1 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
BEST2Q8NFU1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.83□□□□□ -2.12
BEST2Q8NFU1 RNU4-80P-201ENST00000363200 141 ntBASIC1.83□□□□□ -2.12
BEST2Q8NFU1 Y_RNA.149-201ENST00000363558 117 ntBASIC1.83□□□□□ -2.12
BEST2Q8NFU1 RNU6-112P-201ENST00000363599 104 ntBASIC1.83□□□□□ -2.12
BEST2Q8NFU1 RNU6-290P-201ENST00000365212 101 ntBASIC1.83□□□□□ -2.12
BEST2Q8NFU1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.83□□□□□ -2.12
BEST2Q8NFU1 RNU6-376P-201ENST00000384731 106 ntBASIC1.83□□□□□ -2.12
BEST2Q8NFU1 Y_RNA.569-201ENST00000384749 103 ntBASIC1.83□□□□□ -2.12
BEST2Q8NFU1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.83□□□□□ -2.12
BEST2Q8NFU1 AC108667.1-201ENST00000428618 249 ntBASIC1.83□□□□□ -2.12
BEST2Q8NFU1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.83□□□□□ -2.12
BEST2Q8NFU1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.83□□□□□ -2.12
BEST2Q8NFU1 RNU6-1278P-201ENST00000516130 107 ntBASIC1.83□□□□□ -2.12
BEST2Q8NFU1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
BEST2Q8NFU1 Y_RNA.16-201ENST00000362421 102 ntBASIC1.82□□□□□ -2.12
BEST2Q8NFU1 Y_RNA.133-201ENST00000363428 110 ntBASIC1.82□□□□□ -2.12
BEST2Q8NFU1 Y_RNA.172-201ENST00000363765 102 ntBASIC1.82□□□□□ -2.12
BEST2Q8NFU1 RNU6-457P-201ENST00000363999 107 ntBASIC1.82□□□□□ -2.12
BEST2Q8NFU1 Y_RNA.376-201ENST00000365638 108 ntBASIC1.82□□□□□ -2.12
BEST2Q8NFU1 Y_RNA.418-201ENST00000384029 102 ntBASIC1.82□□□□□ -2.12
BEST2Q8NFU1 SNORD116-13-201ENST00000384408 92 ntBASIC1.82□□□□□ -2.12
BEST2Q8NFU1 RNU6-136P-201ENST00000384663 107 ntBASIC1.82□□□□□ -2.12
BEST2Q8NFU1 RNA5SP109-201ENST00000391010 116 ntBASIC1.82□□□□□ -2.12
BEST2Q8NFU1 SNORA67.5-201ENST00000391036 107 ntBASIC1.82□□□□□ -2.12
BEST2Q8NFU1 RNU6-855P-201ENST00000410395 104 ntBASIC1.82□□□□□ -2.12
BEST2Q8NFU1 RNU2-7P-201ENST00000410794 178 ntBASIC1.82□□□□□ -2.12
BEST2Q8NFU1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.82□□□□□ -2.12
BEST2Q8NFU1 RPS26P45-201ENST00000471748 340 ntBASIC1.82□□□□□ -2.12
BEST2Q8NFU1 RNA5SP437-201ENST00000517249 129 ntBASIC1.82□□□□□ -2.12
BEST2Q8NFU1 CBX3P4-201ENST00000538909 354 ntBASIC1.82□□□□□ -2.12
BEST2Q8NFU1 RPL21P9-201ENST00000556149 474 ntBASIC1.82□□□□□ -2.12
BEST2Q8NFU1 MIR4299-201ENST00000577899 72 ntBASIC1.82□□□□□ -2.12
BEST2Q8NFU1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.82□□□□□ -2.12
BEST2Q8NFU1 AL773524.1-201ENST00000614065 229 ntBASIC1.82□□□□□ -2.12
BEST2Q8NFU1 MIR8062-201ENST00000621515 85 ntBASIC1.82□□□□□ -2.12
BEST2Q8NFU1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
BEST2Q8NFU1 RNU6-117P-201ENST00000365415 107 ntBASIC1.81□□□□□ -2.12
BEST2Q8NFU1 RNU6-296P-201ENST00000384608 107 ntBASIC1.81□□□□□ -2.12
BEST2Q8NFU1 MIR520A-201ENST00000384862 85 ntBASIC1.81□□□□□ -2.12
BEST2Q8NFU1 RNU6-710P-201ENST00000410424 105 ntBASIC1.81□□□□□ -2.12
BEST2Q8NFU1 AC010154.1-201ENST00000425857 269 ntBASIC1.81□□□□□ -2.12
BEST2Q8NFU1 AC024067.1-201ENST00000426199 223 ntBASIC1.81□□□□□ -2.12
BEST2Q8NFU1 AC069257.2-201ENST00000441819 155 ntBASIC1.81□□□□□ -2.12
BEST2Q8NFU1 AL606517.2-201ENST00000442855 241 ntBASIC1.81□□□□□ -2.12
BEST2Q8NFU1 TRBVB-201ENST00000477100 408 ntBASIC1.81□□□□□ -2.12
BEST2Q8NFU1 SNORA31.17-201ENST00000516953 127 ntBASIC1.81□□□□□ -2.12
BEST2Q8NFU1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.81□□□□□ -2.12
BEST2Q8NFU1 SNORA63D-201ENST00000364359 132 ntBASIC1.8□□□□□ -2.12
BEST2Q8NFU1 Y_RNA.461-201ENST00000384263 103 ntBASIC1.8□□□□□ -2.12
BEST2Q8NFU1 RNA5SP212-201ENST00000391223 107 ntBASIC1.8□□□□□ -2.12
BEST2Q8NFU1 RNA5SP511-201ENST00000410487 115 ntBASIC1.8□□□□□ -2.12
BEST2Q8NFU1 RNU6-1203P-201ENST00000410703 110 ntBASIC1.8□□□□□ -2.12
BEST2Q8NFU1 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.8□□□□□ -2.12
BEST2Q8NFU1 AC244636.1-201ENST00000421152 228 ntBASIC1.8□□□□□ -2.12
BEST2Q8NFU1 MTCYBP9-201ENST00000431021 303 ntBASIC1.8□□□□□ -2.12
BEST2Q8NFU1 MTND3P2-201ENST00000438452 342 ntBASIC1.8□□□□□ -2.12
BEST2Q8NFU1 RPL23AP6-201ENST00000446637 472 ntBASIC1.8□□□□□ -2.12
BEST2Q8NFU1 HSPE1P13-201ENST00000451143 297 ntBASIC1.8□□□□□ -2.12
BEST2Q8NFU1 AC091021.1-201ENST00000468051 388 ntBASIC1.8□□□□□ -2.12
BEST2Q8NFU1 HMGN1P10-201ENST00000474557 553 ntBASIC1.8□□□□□ -2.12
BEST2Q8NFU1 MTCO2P24-201ENST00000515611 426 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms