Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 Y_RNA.395-201ENST00000383945 109 ntBASIC1.11□□□□□ -2.23
CCDC71LQ8N9Z2 Y_RNA.471-201ENST00000384312 102 ntBASIC1.11□□□□□ -2.23
CCDC71LQ8N9Z2 RNU6-505P-201ENST00000384427 107 ntBASIC1.11□□□□□ -2.23
CCDC71LQ8N9Z2 MIR618-201ENST00000385287 98 ntBASIC1.11□□□□□ -2.23
CCDC71LQ8N9Z2 MIR764-201ENST00000390811 85 ntBASIC1.11□□□□□ -2.23
CCDC71LQ8N9Z2 MCFD2P1-201ENST00000417812 300 ntBASIC1.11□□□□□ -2.23
CCDC71LQ8N9Z2 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC71LQ8N9Z2 SUMO1P2-201ENST00000452524 304 ntBASIC1.11□□□□□ -2.23
CCDC71LQ8N9Z2 AC233266.1-201ENST00000454518 96 ntBASIC1.11□□□□□ -2.23
CCDC71LQ8N9Z2 RNU6-1291P-201ENST00000516591 104 ntBASIC1.11□□□□□ -2.23
CCDC71LQ8N9Z2 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.11□□□□□ -2.23
CCDC71LQ8N9Z2 AC015720.1-201ENST00000565251 277 ntBASIC1.11□□□□□ -2.23
CCDC71LQ8N9Z2 AC242852.1-201ENST00000612151 96 ntBASIC1.11□□□□□ -2.23
CCDC71LQ8N9Z2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.11□□□□□ -2.23
CCDC71LQ8N9Z2 AC244015.1-201ENST00000622301 99 ntBASIC1.11□□□□□ -2.23
CCDC71LQ8N9Z2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CCDC71LQ8N9Z2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
CCDC71LQ8N9Z2 Y_RNA.265-201ENST00000364677 108 ntBASIC1.1□□□□□ -2.23
CCDC71LQ8N9Z2 RNU6-60P-201ENST00000364792 103 ntBASIC1.1□□□□□ -2.23
CCDC71LQ8N9Z2 SNORD14.1-201ENST00000365609 90 ntBASIC1.1□□□□□ -2.23
CCDC71LQ8N9Z2 Y_RNA.424-201ENST00000384063 103 ntBASIC1.1□□□□□ -2.23
CCDC71LQ8N9Z2 Y_RNA.535-201ENST00000384612 99 ntBASIC1.1□□□□□ -2.23
CCDC71LQ8N9Z2 RNU11-5P-201ENST00000391216 129 ntBASIC1.1□□□□□ -2.23
CCDC71LQ8N9Z2 RNU6-1199P-201ENST00000411249 104 ntBASIC1.1□□□□□ -2.23
CCDC71LQ8N9Z2 RPEP5-201ENST00000441137 268 ntBASIC1.1□□□□□ -2.23
CCDC71LQ8N9Z2 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC71LQ8N9Z2 STAG3L5P-204ENST00000443759 179 ntBASIC1.1□□□□□ -2.23
CCDC71LQ8N9Z2 MTND4P19-201ENST00000446659 478 ntBASIC1.1□□□□□ -2.23
CCDC71LQ8N9Z2 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC71LQ8N9Z2 Y_RNA.639-201ENST00000458981 102 ntBASIC1.1□□□□□ -2.23
CCDC71LQ8N9Z2 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC71LQ8N9Z2 SNORA70.12-201ENST00000516084 153 ntBASIC1.1□□□□□ -2.23
CCDC71LQ8N9Z2 RNU6-1337P-201ENST00000516525 95 ntBASIC1.1□□□□□ -2.23
CCDC71LQ8N9Z2 AC040926.1-201ENST00000530195 238 ntBASIC1.1□□□□□ -2.23
CCDC71LQ8N9Z2 CYP3A52P-201ENST00000563326 91 ntBASIC1.1□□□□□ -2.23
CCDC71LQ8N9Z2 AL390123.1-201ENST00000603216 237 ntBASIC1.1□□□□□ -2.23
CCDC71LQ8N9Z2 AC005592.1-201ENST00000566527 1640 ntBASIC1.1□□□□□ -2.23
CCDC71LQ8N9Z2 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CCDC71LQ8N9Z2 RNU6-797P-201ENST00000363101 109 ntBASIC1.09□□□□□ -2.23
CCDC71LQ8N9Z2 Y_RNA.143-201ENST00000363520 106 ntBASIC1.09□□□□□ -2.23
CCDC71LQ8N9Z2 RNU6-117P-201ENST00000365415 107 ntBASIC1.09□□□□□ -2.23
CCDC71LQ8N9Z2 Y_RNA.439-201ENST00000384119 94 ntBASIC1.09□□□□□ -2.23
CCDC71LQ8N9Z2 RNU6-474P-201ENST00000384243 107 ntBASIC1.09□□□□□ -2.23
CCDC71LQ8N9Z2 AL034345.1-201ENST00000407768 123 ntBASIC1.09□□□□□ -2.23
CCDC71LQ8N9Z2 MIR1302-11-201ENST00000408051 138 ntBASIC1.09□□□□□ -2.23
CCDC71LQ8N9Z2 MIR1302-9-201ENST00000408365 138 ntBASIC1.09□□□□□ -2.23
CCDC71LQ8N9Z2 MIR1302-10-201ENST00000408734 138 ntBASIC1.09□□□□□ -2.23
CCDC71LQ8N9Z2 RNA5SP511-201ENST00000410487 115 ntBASIC1.09□□□□□ -2.23
CCDC71LQ8N9Z2 PMCHL1-202ENST00000423102 261 ntBASIC1.09□□□□□ -2.23
CCDC71LQ8N9Z2 U8.20-201ENST00000459445 131 ntBASIC1.09□□□□□ -2.23
CCDC71LQ8N9Z2 RNU2-56P-201ENST00000516826 190 ntBASIC1.09□□□□□ -2.23
CCDC71LQ8N9Z2 RNU7-110P-201ENST00000516891 62 ntBASIC1.09□□□□□ -2.23
CCDC71LQ8N9Z2 RNU6-341P-201ENST00000516973 96 ntBASIC1.09□□□□□ -2.23
CCDC71LQ8N9Z2 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
CCDC71LQ8N9Z2 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.09□□□□□ -2.23
CCDC71LQ8N9Z2 AC091178.2-201ENST00000584401 117 ntBASIC1.09□□□□□ -2.23
CCDC71LQ8N9Z2 AC022441.3-201ENST00000605737 136 ntBASIC1.09□□□□□ -2.23
CCDC71LQ8N9Z2 AL121655.1-201ENST00000605811 308 ntBASIC1.09□□□□□ -2.23
CCDC71LQ8N9Z2 MIR1302-2-201ENST00000607096 138 ntBASIC1.09□□□□□ -2.23
CCDC71LQ8N9Z2 AC010205.1-201ENST00000616668 449 ntBASIC1.09□□□□□ -2.23
CCDC71LQ8N9Z2 AC106754.2-201ENST00000623006 233 ntBASIC1.09□□□□□ -2.23
CCDC71LQ8N9Z2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.08□□□□□ -2.24
CCDC71LQ8N9Z2 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.08□□□□□ -2.24
CCDC71LQ8N9Z2 RNU4-50P-201ENST00000364361 141 ntBASIC1.08□□□□□ -2.24
CCDC71LQ8N9Z2 Y_RNA.331-201ENST00000365267 102 ntBASIC1.08□□□□□ -2.24
CCDC71LQ8N9Z2 RNU6-937P-201ENST00000384325 106 ntBASIC1.08□□□□□ -2.24
CCDC71LQ8N9Z2 SNORD116-13-201ENST00000384408 92 ntBASIC1.08□□□□□ -2.24
CCDC71LQ8N9Z2 Y_RNA.526-201ENST00000384572 110 ntBASIC1.08□□□□□ -2.24
CCDC71LQ8N9Z2 Y_RNA.570-201ENST00000384750 101 ntBASIC1.08□□□□□ -2.24
CCDC71LQ8N9Z2 SNORA12.1-201ENST00000390873 148 ntBASIC1.08□□□□□ -2.24
CCDC71LQ8N9Z2 SNORA67.5-201ENST00000391036 107 ntBASIC1.08□□□□□ -2.24
CCDC71LQ8N9Z2 RNU5A-5P-201ENST00000411054 116 ntBASIC1.08□□□□□ -2.24
CCDC71LQ8N9Z2 SNX2P2-201ENST00000424553 323 ntBASIC1.08□□□□□ -2.24
CCDC71LQ8N9Z2 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC71LQ8N9Z2 AC005042.3-201ENST00000453230 174 ntBASIC1.08□□□□□ -2.24
CCDC71LQ8N9Z2 Y_RNA.638-201ENST00000459374 113 ntBASIC1.08□□□□□ -2.24
CCDC71LQ8N9Z2 SNORA25.10-201ENST00000515926 124 ntBASIC1.08□□□□□ -2.24
CCDC71LQ8N9Z2 RNU6-436P-201ENST00000516171 114 ntBASIC1.08□□□□□ -2.24
CCDC71LQ8N9Z2 RNU6-1096P-201ENST00000517089 102 ntBASIC1.08□□□□□ -2.24
CCDC71LQ8N9Z2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC71LQ8N9Z2 AC068338.1-201ENST00000565567 176 ntBASIC1.08□□□□□ -2.24
CCDC71LQ8N9Z2 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 RNU6-1123P-201ENST00000362347 106 ntBASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 SNORD114-7-201ENST00000362520 77 ntBASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 SNORA1B-201ENST00000362535 133 ntBASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 Y_RNA.138-201ENST00000363462 102 ntBASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 Y_RNA.148-201ENST00000363557 117 ntBASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 Y_RNA.172-201ENST00000363765 102 ntBASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 RNU4-13P-201ENST00000364019 141 ntBASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 RNU6-450P-201ENST00000364654 107 ntBASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 Y_RNA.329-201ENST00000365209 107 ntBASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 RNU6-1065P-201ENST00000384513 106 ntBASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 RNU4-30P-201ENST00000410245 143 ntBASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 Y_RNA.621-201ENST00000411065 96 ntBASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 RPL23AP36-201ENST00000413895 458 ntBASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 AL354751.2-201ENST00000415471 210 ntBASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 MTCO2P12-201ENST00000427426 682 ntBASIC1.07□□□□□ -2.24
CCDC71LQ8N9Z2 PGBD4P5-201ENST00000445958 426 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 162.9 ms