Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 Y_RNA.136-201ENST00000363444 102 ntBASIC1.76□□□□□ -2.13
BEST3Q8N1M1 SNORA63D-201ENST00000364359 132 ntBASIC1.76□□□□□ -2.13
BEST3Q8N1M1 RNU6-117P-201ENST00000365415 107 ntBASIC1.76□□□□□ -2.13
BEST3Q8N1M1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
BEST3Q8N1M1 RNU6-482P-201ENST00000391068 107 ntBASIC1.76□□□□□ -2.13
BEST3Q8N1M1 SNORA53-201ENST00000391141 249 ntBASIC1.76□□□□□ -2.13
BEST3Q8N1M1 SUMO2P12-201ENST00000405924 140 ntBASIC1.76□□□□□ -2.13
BEST3Q8N1M1 AC009310.1-201ENST00000414414 451 ntBASIC1.76□□□□□ -2.13
BEST3Q8N1M1 CYCSP49-201ENST00000420810 319 ntBASIC1.76□□□□□ -2.13
BEST3Q8N1M1 AC244636.1-201ENST00000421152 228 ntBASIC1.76□□□□□ -2.13
BEST3Q8N1M1 HMGN1P10-201ENST00000474557 553 ntBASIC1.76□□□□□ -2.13
BEST3Q8N1M1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.76□□□□□ -2.13
BEST3Q8N1M1 RNU6-1337P-201ENST00000516525 95 ntBASIC1.76□□□□□ -2.13
BEST3Q8N1M1 AC073413.2-201ENST00000604332 360 ntBASIC1.76□□□□□ -2.13
BEST3Q8N1M1 AC010900.2-201ENST00000604508 210 ntBASIC1.76□□□□□ -2.13
BEST3Q8N1M1 AC037487.3-201ENST00000606668 112 ntBASIC1.76□□□□□ -2.13
BEST3Q8N1M1 AL353997.5-201ENST00000618886 171 ntBASIC1.76□□□□□ -2.13
BEST3Q8N1M1 MIR8062-201ENST00000621515 85 ntBASIC1.76□□□□□ -2.13
BEST3Q8N1M1 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.76□□□□□ -2.13
BEST3Q8N1M1 RNU6-326P-201ENST00000365480 107 ntBASIC1.75□□□□□ -2.13
BEST3Q8N1M1 RNU6-296P-201ENST00000384608 107 ntBASIC1.75□□□□□ -2.13
BEST3Q8N1M1 Y_RNA.541-201ENST00000384640 113 ntBASIC1.75□□□□□ -2.13
BEST3Q8N1M1 RNU6-376P-201ENST00000384731 106 ntBASIC1.75□□□□□ -2.13
BEST3Q8N1M1 RNU2-7P-201ENST00000410794 178 ntBASIC1.75□□□□□ -2.13
BEST3Q8N1M1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.75□□□□□ -2.13
BEST3Q8N1M1 RPL23AP6-201ENST00000446637 472 ntBASIC1.75□□□□□ -2.13
BEST3Q8N1M1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.75□□□□□ -2.13
BEST3Q8N1M1 MTCO2P24-201ENST00000515611 426 ntBASIC1.75□□□□□ -2.13
BEST3Q8N1M1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.75□□□□□ -2.13
BEST3Q8N1M1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.75□□□□□ -2.13
BEST3Q8N1M1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.75□□□□□ -2.13
BEST3Q8N1M1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
BEST3Q8N1M1 AC018630.2-201ENST00000534866 2403 ntBASIC1.75□□□□□ -2.13
BEST3Q8N1M1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
BEST3Q8N1M1 Y_RNA.512-201ENST00000384518 102 ntBASIC1.74□□□□□ -2.13
BEST3Q8N1M1 MIR562-201ENST00000384894 95 ntBASIC1.74□□□□□ -2.13
BEST3Q8N1M1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
BEST3Q8N1M1 MIR1302-6-201ENST00000408466 90 ntBASIC1.74□□□□□ -2.13
BEST3Q8N1M1 RNU6-1203P-201ENST00000410703 110 ntBASIC1.74□□□□□ -2.13
BEST3Q8N1M1 MTCYBP9-201ENST00000431021 303 ntBASIC1.74□□□□□ -2.13
BEST3Q8N1M1 RNA5SP233-201ENST00000459153 113 ntBASIC1.74□□□□□ -2.13
BEST3Q8N1M1 Y_RNA.638-201ENST00000459374 113 ntBASIC1.74□□□□□ -2.13
BEST3Q8N1M1 TRBVB-201ENST00000477100 408 ntBASIC1.74□□□□□ -2.13
BEST3Q8N1M1 RPL36AP21-201ENST00000490372 323 ntBASIC1.74□□□□□ -2.13
BEST3Q8N1M1 RNA5SP481-201ENST00000516814 122 ntBASIC1.74□□□□□ -2.13
BEST3Q8N1M1 RNU2-31P-201ENST00000516954 155 ntBASIC1.74□□□□□ -2.13
BEST3Q8N1M1 RNU6-570P-201ENST00000517051 105 ntBASIC1.74□□□□□ -2.13
BEST3Q8N1M1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.74□□□□□ -2.13
BEST3Q8N1M1 MIR4299-201ENST00000577899 72 ntBASIC1.74□□□□□ -2.13
BEST3Q8N1M1 MIR3145-201ENST00000580727 82 ntBASIC1.74□□□□□ -2.13
BEST3Q8N1M1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
BEST3Q8N1M1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.73□□□□□ -2.13
BEST3Q8N1M1 Y_RNA.341-201ENST00000365341 102 ntBASIC1.73□□□□□ -2.13
BEST3Q8N1M1 Y_RNA.368-201ENST00000365547 113 ntBASIC1.73□□□□□ -2.13
BEST3Q8N1M1 Y_RNA.376-201ENST00000365638 108 ntBASIC1.73□□□□□ -2.13
BEST3Q8N1M1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.73□□□□□ -2.13
BEST3Q8N1M1 Y_RNA.418-201ENST00000384029 102 ntBASIC1.73□□□□□ -2.13
BEST3Q8N1M1 Y_RNA.456-201ENST00000384232 111 ntBASIC1.73□□□□□ -2.13
BEST3Q8N1M1 MIR1302-3-201ENST00000408128 138 ntBASIC1.73□□□□□ -2.13
BEST3Q8N1M1 RNU6-855P-201ENST00000410395 104 ntBASIC1.73□□□□□ -2.13
BEST3Q8N1M1 MTND3P2-201ENST00000438452 342 ntBASIC1.73□□□□□ -2.13
BEST3Q8N1M1 RNU6-63P-201ENST00000516690 95 ntBASIC1.73□□□□□ -2.13
BEST3Q8N1M1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.73□□□□□ -2.13
BEST3Q8N1M1 MIR6079-201ENST00000635807 62 ntBASIC1.73□□□□□ -2.13
BEST3Q8N1M1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
BEST3Q8N1M1 RNU4-80P-201ENST00000363200 141 ntBASIC1.72□□□□□ -2.13
BEST3Q8N1M1 Y_RNA.461-201ENST00000384263 103 ntBASIC1.72□□□□□ -2.13
BEST3Q8N1M1 RNU6-950P-201ENST00000384651 107 ntBASIC1.72□□□□□ -2.13
BEST3Q8N1M1 MIR520G-201ENST00000385064 90 ntBASIC1.72□□□□□ -2.13
BEST3Q8N1M1 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.72□□□□□ -2.13
BEST3Q8N1M1 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.72□□□□□ -2.13
BEST3Q8N1M1 AL162725.1-201ENST00000435405 301 ntBASIC1.72□□□□□ -2.13
BEST3Q8N1M1 RNU6-1338P-201ENST00000516328 91 ntBASIC1.72□□□□□ -2.13
BEST3Q8N1M1 SNORA31.17-201ENST00000516953 127 ntBASIC1.72□□□□□ -2.13
BEST3Q8N1M1 AL162730.1-201ENST00000605734 292 ntBASIC1.72□□□□□ -2.13
BEST3Q8N1M1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.72□□□□□ -2.13
BEST3Q8N1M1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.72□□□□□ -2.13
BEST3Q8N1M1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
BEST3Q8N1M1 SNORA25.1-201ENST00000362326 128 ntBASIC1.71□□□□□ -2.14
BEST3Q8N1M1 RNU4-13P-201ENST00000364019 141 ntBASIC1.71□□□□□ -2.14
BEST3Q8N1M1 Y_RNA.310-201ENST00000365063 113 ntBASIC1.71□□□□□ -2.14
BEST3Q8N1M1 RNU6-514P-201ENST00000384208 107 ntBASIC1.71□□□□□ -2.14
BEST3Q8N1M1 Y_RNA.556-201ENST00000384677 113 ntBASIC1.71□□□□□ -2.14
BEST3Q8N1M1 RNA5SP109-201ENST00000391010 116 ntBASIC1.71□□□□□ -2.14
BEST3Q8N1M1 RNA5SP511-201ENST00000410487 115 ntBASIC1.71□□□□□ -2.14
BEST3Q8N1M1 RNA5SP489-201ENST00000410986 109 ntBASIC1.71□□□□□ -2.14
BEST3Q8N1M1 MTCO1P5-201ENST00000433573 344 ntBASIC1.71□□□□□ -2.14
BEST3Q8N1M1 RPS27P1-201ENST00000450552 247 ntBASIC1.71□□□□□ -2.14
BEST3Q8N1M1 RPS20P10-201ENST00000451209 253 ntBASIC1.71□□□□□ -2.14
BEST3Q8N1M1 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.71□□□□□ -2.14
BEST3Q8N1M1 RNU6-191P-201ENST00000516295 94 ntBASIC1.71□□□□□ -2.14
BEST3Q8N1M1 RNU6-341P-201ENST00000516973 96 ntBASIC1.71□□□□□ -2.14
BEST3Q8N1M1 RNA5SP437-201ENST00000517249 129 ntBASIC1.71□□□□□ -2.14
BEST3Q8N1M1 AL161670.1-201ENST00000554348 137 ntBASIC1.71□□□□□ -2.14
BEST3Q8N1M1 AC015720.1-201ENST00000565251 277 ntBASIC1.71□□□□□ -2.14
BEST3Q8N1M1 AC022254.1-201ENST00000567857 235 ntBASIC1.71□□□□□ -2.14
BEST3Q8N1M1 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.71□□□□□ -2.14
BEST3Q8N1M1 MIR4713-201ENST00000582691 75 ntBASIC1.71□□□□□ -2.14
BEST3Q8N1M1 AC091178.2-201ENST00000584401 117 ntBASIC1.71□□□□□ -2.14
BEST3Q8N1M1 AL512605.2-201ENST00000592972 256 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 198 ms