Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.76□□□□□ -2.29
CDKL3Q8IVW4 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.76□□□□□ -2.29
CDKL3Q8IVW4 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.76□□□□□ -2.29
CDKL3Q8IVW4 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.76□□□□□ -2.29
CDKL3Q8IVW4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.76□□□□□ -2.29
CDKL3Q8IVW4 SNORA40.9-201ENST00000515895 93 ntBASIC0.76□□□□□ -2.29
CDKL3Q8IVW4 RNU6-322P-201ENST00000516010 103 ntBASIC0.76□□□□□ -2.29
CDKL3Q8IVW4 RNU7-12P-201ENST00000516030 62 ntBASIC0.76□□□□□ -2.29
CDKL3Q8IVW4 RNU6-1278P-201ENST00000516130 107 ntBASIC0.76□□□□□ -2.29
CDKL3Q8IVW4 PVT1_3.1-201ENST00000620853 95 ntBASIC0.76□□□□□ -2.29
CDKL3Q8IVW4 AC127459.3-201ENST00000624328 466 ntBASIC0.76□□□□□ -2.29
CDKL3Q8IVW4 MIR3674-201ENST00000636576 68 ntBASIC0.76□□□□□ -2.29
CDKL3Q8IVW4 HSBP1P2-201ENST00000299671 229 ntBASIC0.75□□□□□ -2.29
CDKL3Q8IVW4 Y_RNA.88-201ENST00000363029 99 ntBASIC0.75□□□□□ -2.29
CDKL3Q8IVW4 SNORA2.2-201ENST00000365473 135 ntBASIC0.75□□□□□ -2.29
CDKL3Q8IVW4 MIR598-201ENST00000384868 97 ntBASIC0.75□□□□□ -2.29
CDKL3Q8IVW4 RNA5SP482-201ENST00000391269 118 ntBASIC0.75□□□□□ -2.29
CDKL3Q8IVW4 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.75□□□□□ -2.29
CDKL3Q8IVW4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.75□□□□□ -2.29
CDKL3Q8IVW4 AC004941.2-201ENST00000427009 228 ntBASIC0.75□□□□□ -2.29
CDKL3Q8IVW4 AC245047.7-201ENST00000440265 293 ntBASIC0.75□□□□□ -2.29
CDKL3Q8IVW4 AC233266.1-201ENST00000454518 96 ntBASIC0.75□□□□□ -2.29
CDKL3Q8IVW4 AC022493.2-201ENST00000506122 481 ntBASIC0.75□□□□□ -2.29
CDKL3Q8IVW4 CYP3A137P-201ENST00000562436 69 ntBASIC0.75□□□□□ -2.29
CDKL3Q8IVW4 AC011712.1-201ENST00000588959 234 ntBASIC0.75□□□□□ -2.29
CDKL3Q8IVW4 AC060780.3-201ENST00000589464 80 ntBASIC0.75□□□□□ -2.29
CDKL3Q8IVW4 AC242852.1-201ENST00000612151 96 ntBASIC0.75□□□□□ -2.29
CDKL3Q8IVW4 AC106800.4-201ENST00000614905 153 ntBASIC0.75□□□□□ -2.29
CDKL3Q8IVW4 PISRT1.1-201ENST00000616930 107 ntBASIC0.75□□□□□ -2.29
CDKL3Q8IVW4 AC244015.1-201ENST00000622301 99 ntBASIC0.75□□□□□ -2.29
CDKL3Q8IVW4 AC008163.1-202ENST00000636004 2889 ntBASIC0.75□□□□□ -2.29
CDKL3Q8IVW4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.75□□□□□ -2.29
CDKL3Q8IVW4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
CDKL3Q8IVW4 Y_RNA.72-201ENST00000362894 103 ntBASIC0.74□□□□□ -2.29
CDKL3Q8IVW4 SNORD114-24-201ENST00000365029 72 ntBASIC0.74□□□□□ -2.29
CDKL3Q8IVW4 RNU6-117P-201ENST00000365415 107 ntBASIC0.74□□□□□ -2.29
CDKL3Q8IVW4 RNU6-136P-201ENST00000384663 107 ntBASIC0.74□□□□□ -2.29
CDKL3Q8IVW4 RNU5A-5P-201ENST00000411054 116 ntBASIC0.74□□□□□ -2.29
CDKL3Q8IVW4 RPL23AP50-201ENST00000434149 455 ntBASIC0.74□□□□□ -2.29
CDKL3Q8IVW4 AC104332.1-201ENST00000440471 797 ntBASIC0.74□□□□□ -2.29
CDKL3Q8IVW4 SNORD124-201ENST00000459577 104 ntBASIC0.74□□□□□ -2.29
CDKL3Q8IVW4 AL049830.1-201ENST00000468034 425 ntBASIC0.74□□□□□ -2.29
CDKL3Q8IVW4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.74□□□□□ -2.29
CDKL3Q8IVW4 RNU6-1096P-201ENST00000517089 102 ntBASIC0.74□□□□□ -2.29
CDKL3Q8IVW4 MIR5000-201ENST00000577717 103 ntBASIC0.74□□□□□ -2.29
CDKL3Q8IVW4 AC005899.2-201ENST00000584353 90 ntBASIC0.74□□□□□ -2.29
CDKL3Q8IVW4 AL117336.2-201ENST00000602435 335 ntBASIC0.74□□□□□ -2.29
CDKL3Q8IVW4 AC005828.6-201ENST00000606610 232 ntBASIC0.74□□□□□ -2.29
CDKL3Q8IVW4 AC084782.3-201ENST00000612282 578 ntBASIC0.74□□□□□ -2.29
CDKL3Q8IVW4 MIR1244-1-201ENST00000612829 85 ntBASIC0.74□□□□□ -2.29
CDKL3Q8IVW4 AC092794.2-201ENST00000620933 563 ntBASIC0.74□□□□□ -2.29
CDKL3Q8IVW4 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.74□□□□□ -2.29
CDKL3Q8IVW4 MIR1244-3-201ENST00000635744 85 ntBASIC0.74□□□□□ -2.29
CDKL3Q8IVW4 MIR1244-2-201ENST00000636449 85 ntBASIC0.74□□□□□ -2.29
CDKL3Q8IVW4 MIR1244-4-202ENST00000636813 85 ntBASIC0.74□□□□□ -2.29
CDKL3Q8IVW4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
CDKL3Q8IVW4 RNU6-969P-201ENST00000383900 105 ntBASIC0.73□□□□□ -2.29
CDKL3Q8IVW4 MIR526A1-201ENST00000384897 85 ntBASIC0.73□□□□□ -2.29
CDKL3Q8IVW4 MIR520G-201ENST00000385064 90 ntBASIC0.73□□□□□ -2.29
CDKL3Q8IVW4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
CDKL3Q8IVW4 SNORA75.4-201ENST00000391278 119 ntBASIC0.73□□□□□ -2.29
CDKL3Q8IVW4 SNORD12B-201ENST00000410433 91 ntBASIC0.73□□□□□ -2.29
CDKL3Q8IVW4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.73□□□□□ -2.29
CDKL3Q8IVW4 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.73□□□□□ -2.29
CDKL3Q8IVW4 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.73□□□□□ -2.29
CDKL3Q8IVW4 RPL39P39-201ENST00000455840 151 ntBASIC0.73□□□□□ -2.29
CDKL3Q8IVW4 RPL17P19-201ENST00000489069 552 ntBASIC0.73□□□□□ -2.29
CDKL3Q8IVW4 AC116353.2-201ENST00000505332 712 ntBASIC0.73□□□□□ -2.29
CDKL3Q8IVW4 RNU6-358P-201ENST00000516564 75 ntBASIC0.73□□□□□ -2.29
CDKL3Q8IVW4 RNU6-63P-201ENST00000516690 95 ntBASIC0.73□□□□□ -2.29
CDKL3Q8IVW4 RNU6-307P-201ENST00000516743 106 ntBASIC0.73□□□□□ -2.29
CDKL3Q8IVW4 RNA5SP480-201ENST00000516840 109 ntBASIC0.73□□□□□ -2.29
CDKL3Q8IVW4 RNU6-1116P-201ENST00000517269 99 ntBASIC0.73□□□□□ -2.29
CDKL3Q8IVW4 AC136628.3-201ENST00000521868 290 ntBASIC0.73□□□□□ -2.29
CDKL3Q8IVW4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.73□□□□□ -2.29
CDKL3Q8IVW4 AL357312.1-201ENST00000603879 298 ntBASIC0.73□□□□□ -2.29
CDKL3Q8IVW4 RNU6-1301P-201ENST00000362724 104 ntBASIC0.72□□□□□ -2.29
CDKL3Q8IVW4 RNU4-41P-201ENST00000364426 143 ntBASIC0.72□□□□□ -2.29
CDKL3Q8IVW4 RNU6-342P-201ENST00000384521 104 ntBASIC0.72□□□□□ -2.29
CDKL3Q8IVW4 MIR200A-201ENST00000384875 90 ntBASIC0.72□□□□□ -2.29
CDKL3Q8IVW4 MTND5P15-201ENST00000434246 349 ntBASIC0.72□□□□□ -2.29
CDKL3Q8IVW4 Z98949.2-201ENST00000440996 144 ntBASIC0.72□□□□□ -2.29
CDKL3Q8IVW4 SUMO1P2-201ENST00000452524 304 ntBASIC0.72□□□□□ -2.29
CDKL3Q8IVW4 SNORD79.1-201ENST00000516069 84 ntBASIC0.72□□□□□ -2.29
CDKL3Q8IVW4 RNU7-30P-201ENST00000516835 62 ntBASIC0.72□□□□□ -2.29
CDKL3Q8IVW4 RNU6-1213P-201ENST00000517075 94 ntBASIC0.72□□□□□ -2.29
CDKL3Q8IVW4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.72□□□□□ -2.29
CDKL3Q8IVW4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
CDKL3Q8IVW4 Y_RNA.243-201ENST00000364481 109 ntBASIC0.71□□□□□ -2.3
CDKL3Q8IVW4 RNU6-99P-201ENST00000364721 107 ntBASIC0.71□□□□□ -2.3
CDKL3Q8IVW4 RNU6-1310P-201ENST00000384153 107 ntBASIC0.71□□□□□ -2.3
CDKL3Q8IVW4 MIR7-2-201ENST00000384970 110 ntBASIC0.71□□□□□ -2.3
CDKL3Q8IVW4 FCF1P9-201ENST00000412546 282 ntBASIC0.71□□□□□ -2.3
CDKL3Q8IVW4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.71□□□□□ -2.3
CDKL3Q8IVW4 MTND1P4-201ENST00000435196 415 ntBASIC0.71□□□□□ -2.3
CDKL3Q8IVW4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.71□□□□□ -2.3
CDKL3Q8IVW4 AC002429.1-201ENST00000437672 148 ntBASIC0.71□□□□□ -2.3
CDKL3Q8IVW4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.71□□□□□ -2.3
CDKL3Q8IVW4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.71□□□□□ -2.3
CDKL3Q8IVW4 MIR2053-201ENST00000459295 91 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 722.2 ms