Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SNORA25.9-201ENST00000365087 128 ntBASIC2.01□□□□□ -2.09
HERC6Q8IVU3 RNU6-407P-201ENST00000365280 104 ntBASIC2.01□□□□□ -2.09
HERC6Q8IVU3 MIR215-201ENST00000384858 110 ntBASIC2.01□□□□□ -2.09
HERC6Q8IVU3 SNORD115-46-201ENST00000390982 71 ntBASIC2.01□□□□□ -2.09
HERC6Q8IVU3 MIR873-201ENST00000401120 77 ntBASIC2.01□□□□□ -2.09
HERC6Q8IVU3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.01□□□□□ -2.09
HERC6Q8IVU3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.01□□□□□ -2.09
HERC6Q8IVU3 AC005002.2-201ENST00000438228 269 ntBASIC2.01□□□□□ -2.09
HERC6Q8IVU3 RNA5SP20-201ENST00000515976 84 ntBASIC2.01□□□□□ -2.09
HERC6Q8IVU3 MIR4503-201ENST00000582187 83 ntBASIC2.01□□□□□ -2.09
HERC6Q8IVU3 AL096840.1-201ENST00000603287 93 ntBASIC2.01□□□□□ -2.09
HERC6Q8IVU3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2□□□□□ -2.09
HERC6Q8IVU3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2□□□□□ -2.09
HERC6Q8IVU3 Y_RNA.176-201ENST00000363815 109 ntBASIC2□□□□□ -2.09
HERC6Q8IVU3 RNU6-454P-201ENST00000364292 107 ntBASIC2□□□□□ -2.09
HERC6Q8IVU3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2□□□□□ -2.09
HERC6Q8IVU3 RNU2-54P-201ENST00000410299 190 ntBASIC2□□□□□ -2.09
HERC6Q8IVU3 RNU2-40P-201ENST00000410833 196 ntBASIC2□□□□□ -2.09
HERC6Q8IVU3 RPL21P38-201ENST00000418090 167 ntBASIC2□□□□□ -2.09
HERC6Q8IVU3 AC245047.4-201ENST00000433189 144 ntBASIC2□□□□□ -2.09
HERC6Q8IVU3 AL731563.1-201ENST00000442202 214 ntBASIC2□□□□□ -2.09
HERC6Q8IVU3 AC010409.1-201ENST00000487382 476 ntBASIC2□□□□□ -2.09
HERC6Q8IVU3 AL163195.1-201ENST00000496941 348 ntBASIC2□□□□□ -2.09
HERC6Q8IVU3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2□□□□□ -2.09
HERC6Q8IVU3 AC025465.3-201ENST00000510570 311 ntBASIC2□□□□□ -2.09
HERC6Q8IVU3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2□□□□□ -2.09
HERC6Q8IVU3 AC023157.2-201ENST00000540596 141 ntBASIC2□□□□□ -2.09
HERC6Q8IVU3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2□□□□□ -2.09
HERC6Q8IVU3 MIR4423-201ENST00000580922 80 ntBASIC2□□□□□ -2.09
HERC6Q8IVU3 MIR4300-201ENST00000581016 96 ntBASIC2□□□□□ -2.09
HERC6Q8IVU3 MIR3935-201ENST00000583472 104 ntBASIC2□□□□□ -2.09
HERC6Q8IVU3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2□□□□□ -2.09
HERC6Q8IVU3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
HERC6Q8IVU3 SNORA27.1-201ENST00000362604 124 ntBASIC1.99□□□□□ -2.09
HERC6Q8IVU3 snoU2_19.2-201ENST00000363024 80 ntBASIC1.99□□□□□ -2.09
HERC6Q8IVU3 Y_RNA.101-201ENST00000363154 102 ntBASIC1.99□□□□□ -2.09
HERC6Q8IVU3 Y_RNA.144-201ENST00000363521 113 ntBASIC1.99□□□□□ -2.09
HERC6Q8IVU3 Y_RNA.796-201ENST00000364268 102 ntBASIC1.99□□□□□ -2.09
HERC6Q8IVU3 SNORA63D-201ENST00000364359 132 ntBASIC1.99□□□□□ -2.09
HERC6Q8IVU3 Y_RNA.799-201ENST00000364992 102 ntBASIC1.99□□□□□ -2.09
HERC6Q8IVU3 SNORD63-201ENST00000384262 68 ntBASIC1.99□□□□□ -2.09
HERC6Q8IVU3 MIR562-201ENST00000384894 95 ntBASIC1.99□□□□□ -2.09
HERC6Q8IVU3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
HERC6Q8IVU3 MIR676-201ENST00000390702 67 ntBASIC1.99□□□□□ -2.09
HERC6Q8IVU3 RNU6-360P-201ENST00000390944 104 ntBASIC1.99□□□□□ -2.09
HERC6Q8IVU3 SNORA67.5-201ENST00000391036 107 ntBASIC1.99□□□□□ -2.09
HERC6Q8IVU3 AL355796.1-201ENST00000406706 323 ntBASIC1.99□□□□□ -2.09
HERC6Q8IVU3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.99□□□□□ -2.09
HERC6Q8IVU3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.99□□□□□ -2.09
HERC6Q8IVU3 RPS29P11-201ENST00000496507 171 ntBASIC1.99□□□□□ -2.09
HERC6Q8IVU3 AC107393.1-201ENST00000512403 346 ntBASIC1.99□□□□□ -2.09
HERC6Q8IVU3 RNA5SP445-201ENST00000515889 115 ntBASIC1.99□□□□□ -2.09
HERC6Q8IVU3 RNU6-1278P-201ENST00000516130 107 ntBASIC1.99□□□□□ -2.09
HERC6Q8IVU3 SNORA40.15-201ENST00000516884 107 ntBASIC1.99□□□□□ -2.09
HERC6Q8IVU3 SNORA31.17-201ENST00000516953 127 ntBASIC1.99□□□□□ -2.09
HERC6Q8IVU3 RNU7-172P-201ENST00000517125 64 ntBASIC1.99□□□□□ -2.09
HERC6Q8IVU3 RNU2-12P-201ENST00000517216 168 ntBASIC1.99□□□□□ -2.09
HERC6Q8IVU3 AL161670.1-201ENST00000554348 137 ntBASIC1.99□□□□□ -2.09
HERC6Q8IVU3 AC022254.1-201ENST00000567857 235 ntBASIC1.99□□□□□ -2.09
HERC6Q8IVU3 MIR4303-201ENST00000581299 66 ntBASIC1.99□□□□□ -2.09
HERC6Q8IVU3 AL359851.1-201ENST00000569460 4997 ntBASIC1.99□□□□□ -2.09
HERC6Q8IVU3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
HERC6Q8IVU3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
HERC6Q8IVU3 Y_RNA.149-201ENST00000363558 117 ntBASIC1.98□□□□□ -2.09
HERC6Q8IVU3 RNU6-414P-201ENST00000363705 104 ntBASIC1.98□□□□□ -2.09
HERC6Q8IVU3 RNU6-324P-201ENST00000363957 106 ntBASIC1.98□□□□□ -2.09
HERC6Q8IVU3 Y_RNA.376-201ENST00000365638 108 ntBASIC1.98□□□□□ -2.09
HERC6Q8IVU3 RNU6-463P-201ENST00000384340 107 ntBASIC1.98□□□□□ -2.09
HERC6Q8IVU3 RNU6-296P-201ENST00000384608 107 ntBASIC1.98□□□□□ -2.09
HERC6Q8IVU3 MT-TW-201ENST00000387382 68 ntBASIC1.98□□□□□ -2.09
HERC6Q8IVU3 RNU6-1199P-201ENST00000411249 104 ntBASIC1.98□□□□□ -2.09
HERC6Q8IVU3 COX6CP10-201ENST00000416832 224 ntBASIC1.98□□□□□ -2.09
HERC6Q8IVU3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.98□□□□□ -2.09
HERC6Q8IVU3 RNU6-155P-201ENST00000516347 100 ntBASIC1.98□□□□□ -2.09
HERC6Q8IVU3 AP003733.2-201ENST00000529409 171 ntBASIC1.98□□□□□ -2.09
HERC6Q8IVU3 AC005828.6-201ENST00000606610 232 ntBASIC1.98□□□□□ -2.09
HERC6Q8IVU3 AC011373.1-201ENST00000607270 237 ntBASIC1.98□□□□□ -2.09
HERC6Q8IVU3 MIR8062-201ENST00000621515 85 ntBASIC1.98□□□□□ -2.09
HERC6Q8IVU3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
HERC6Q8IVU3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HERC6Q8IVU3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.97□□□□□ -2.09
HERC6Q8IVU3 Y_RNA.286-201ENST00000364813 102 ntBASIC1.97□□□□□ -2.09
HERC6Q8IVU3 RNU6-1175P-201ENST00000365200 107 ntBASIC1.97□□□□□ -2.09
HERC6Q8IVU3 Y_RNA.396-201ENST00000383949 103 ntBASIC1.97□□□□□ -2.09
HERC6Q8IVU3 Y_RNA.446-201ENST00000384178 104 ntBASIC1.97□□□□□ -2.09
HERC6Q8IVU3 RNU6-472P-201ENST00000384299 107 ntBASIC1.97□□□□□ -2.09
HERC6Q8IVU3 RNU6-102P-201ENST00000384485 104 ntBASIC1.97□□□□□ -2.09
HERC6Q8IVU3 Y_RNA.570-201ENST00000384750 101 ntBASIC1.97□□□□□ -2.09
HERC6Q8IVU3 AC024067.1-201ENST00000426199 223 ntBASIC1.97□□□□□ -2.09
HERC6Q8IVU3 HSPE1P9-201ENST00000440046 311 ntBASIC1.97□□□□□ -2.09
HERC6Q8IVU3 AC245517.4-201ENST00000448601 281 ntBASIC1.97□□□□□ -2.09
HERC6Q8IVU3 AC005042.3-201ENST00000453230 174 ntBASIC1.97□□□□□ -2.09
HERC6Q8IVU3 AC097462.1-201ENST00000514125 324 ntBASIC1.97□□□□□ -2.09
HERC6Q8IVU3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.97□□□□□ -2.09
HERC6Q8IVU3 AC022441.3-201ENST00000605737 136 ntBASIC1.97□□□□□ -2.09
HERC6Q8IVU3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.97□□□□□ -2.09
HERC6Q8IVU3 MIR376A1-201ENST00000616574 68 ntBASIC1.97□□□□□ -2.09
HERC6Q8IVU3 7SK.10-201ENST00000621414 298 ntBASIC1.97□□□□□ -2.09
HERC6Q8IVU3 AC127459.3-201ENST00000624328 466 ntBASIC1.97□□□□□ -2.09
HERC6Q8IVU3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms