Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 MIR4769-201ENST00000584126 77 ntBASIC1.55□□□□□ -2.16
LDB1Q86U70 AL021879.1-201ENST00000611756 288 ntBASIC1.55□□□□□ -2.16
LDB1Q86U70 AC040896.1-201ENST00000613819 479 ntBASIC1.55□□□□□ -2.16
LDB1Q86U70 MIR8063-201ENST00000621930 81 ntBASIC1.55□□□□□ -2.16
LDB1Q86U70 RNU1-17P-201ENST00000363022 152 ntBASIC1.54□□□□□ -2.16
LDB1Q86U70 RNA5SP99-201ENST00000364020 114 ntBASIC1.54□□□□□ -2.16
LDB1Q86U70 AC117470.1-201ENST00000381974 330 ntBASIC1.54□□□□□ -2.16
LDB1Q86U70 RNU6-937P-201ENST00000384325 106 ntBASIC1.54□□□□□ -2.16
LDB1Q86U70 RNU6-136P-201ENST00000384663 107 ntBASIC1.54□□□□□ -2.16
LDB1Q86U70 RNU6-997P-201ENST00000384725 107 ntBASIC1.54□□□□□ -2.16
LDB1Q86U70 RNU1-78P-201ENST00000391248 165 ntBASIC1.54□□□□□ -2.16
LDB1Q86U70 RNU6-101P-201ENST00000410323 104 ntBASIC1.54□□□□□ -2.16
LDB1Q86U70 RNU6-710P-201ENST00000410424 105 ntBASIC1.54□□□□□ -2.16
LDB1Q86U70 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.54□□□□□ -2.16
LDB1Q86U70 RNU1-98P-201ENST00000458992 160 ntBASIC1.54□□□□□ -2.16
LDB1Q86U70 RNU7-28P-201ENST00000516759 62 ntBASIC1.54□□□□□ -2.16
LDB1Q86U70 RNU2-56P-201ENST00000516826 190 ntBASIC1.54□□□□□ -2.16
LDB1Q86U70 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.54□□□□□ -2.16
LDB1Q86U70 AP002004.2-201ENST00000531656 154 ntBASIC1.54□□□□□ -2.16
LDB1Q86U70 MIR4285-201ENST00000581001 85 ntBASIC1.54□□□□□ -2.16
LDB1Q86U70 AC104695.3-201ENST00000604052 296 ntBASIC1.54□□□□□ -2.16
LDB1Q86U70 PART1_1.1-201ENST00000611761 217 ntBASIC1.54□□□□□ -2.16
LDB1Q86U70 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
LDB1Q86U70 MIR302D-201ENST00000362275 68 ntBASIC1.53□□□□□ -2.16
LDB1Q86U70 MIR126-201ENST00000362291 85 ntBASIC1.53□□□□□ -2.16
LDB1Q86U70 SNORD33-201ENST00000362761 85 ntBASIC1.53□□□□□ -2.16
LDB1Q86U70 Y_RNA.265-201ENST00000364677 108 ntBASIC1.53□□□□□ -2.16
LDB1Q86U70 SNORD1A-201ENST00000364968 72 ntBASIC1.53□□□□□ -2.16
LDB1Q86U70 Y_RNA.329-201ENST00000365209 107 ntBASIC1.53□□□□□ -2.16
LDB1Q86U70 Y_RNA.389-201ENST00000383924 113 ntBASIC1.53□□□□□ -2.16
LDB1Q86U70 RNU6-823P-201ENST00000391042 103 ntBASIC1.53□□□□□ -2.16
LDB1Q86U70 MIR1304-201ENST00000408243 91 ntBASIC1.53□□□□□ -2.16
LDB1Q86U70 RNA5SP511-201ENST00000410487 115 ntBASIC1.53□□□□□ -2.16
LDB1Q86U70 RNU6-130P-201ENST00000411112 103 ntBASIC1.53□□□□□ -2.16
LDB1Q86U70 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.53□□□□□ -2.16
LDB1Q86U70 AL162725.1-201ENST00000435405 301 ntBASIC1.53□□□□□ -2.16
LDB1Q86U70 PGBD4P5-201ENST00000445958 426 ntBASIC1.53□□□□□ -2.16
LDB1Q86U70 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.53□□□□□ -2.16
LDB1Q86U70 RNU6-1291P-201ENST00000516591 104 ntBASIC1.53□□□□□ -2.16
LDB1Q86U70 Y_RNA.701-201ENST00000516812 110 ntBASIC1.53□□□□□ -2.16
LDB1Q86U70 Y_RNA.715-201ENST00000517082 110 ntBASIC1.53□□□□□ -2.16
LDB1Q86U70 RNU6-1096P-201ENST00000517089 102 ntBASIC1.53□□□□□ -2.16
LDB1Q86U70 AL358944.1-201ENST00000528537 144 ntBASIC1.53□□□□□ -2.16
LDB1Q86U70 AC020661.2-201ENST00000560114 134 ntBASIC1.53□□□□□ -2.16
LDB1Q86U70 AC015688.6-201ENST00000577737 104 ntBASIC1.53□□□□□ -2.16
LDB1Q86U70 MIR3171-201ENST00000584270 74 ntBASIC1.53□□□□□ -2.16
LDB1Q86U70 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.53□□□□□ -2.16
LDB1Q86U70 BX248123.2-201ENST00000606318 124 ntBASIC1.53□□□□□ -2.16
LDB1Q86U70 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.52□□□□□ -2.17
LDB1Q86U70 RNU6-21P-201ENST00000384710 107 ntBASIC1.52□□□□□ -2.17
LDB1Q86U70 STAG3L5P-204ENST00000443759 179 ntBASIC1.52□□□□□ -2.17
LDB1Q86U70 AC233266.1-201ENST00000454518 96 ntBASIC1.52□□□□□ -2.17
LDB1Q86U70 AC079140.2-201ENST00000506193 142 ntBASIC1.52□□□□□ -2.17
LDB1Q86U70 RNU6-970P-201ENST00000516312 107 ntBASIC1.52□□□□□ -2.17
LDB1Q86U70 AC015720.1-201ENST00000565251 277 ntBASIC1.52□□□□□ -2.17
LDB1Q86U70 AC242852.1-201ENST00000612151 96 ntBASIC1.52□□□□□ -2.17
LDB1Q86U70 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.52□□□□□ -2.17
LDB1Q86U70 AC073349.3-201ENST00000617616 186 ntBASIC1.52□□□□□ -2.17
LDB1Q86U70 AL513423.1-201ENST00000621695 132 ntBASIC1.52□□□□□ -2.17
LDB1Q86U70 AC244015.1-201ENST00000622301 99 ntBASIC1.52□□□□□ -2.17
LDB1Q86U70 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
LDB1Q86U70 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
LDB1Q86U70 SNORA1B-201ENST00000362535 133 ntBASIC1.51□□□□□ -2.17
LDB1Q86U70 Y_RNA.158-201ENST00000363651 101 ntBASIC1.51□□□□□ -2.17
LDB1Q86U70 RNU4-13P-201ENST00000364019 141 ntBASIC1.51□□□□□ -2.17
LDB1Q86U70 MIR513A1-201ENST00000385138 129 ntBASIC1.51□□□□□ -2.17
LDB1Q86U70 MIR1252-201ENST00000408861 65 ntBASIC1.51□□□□□ -2.17
LDB1Q86U70 AC023790.1-201ENST00000482174 347 ntBASIC1.51□□□□□ -2.17
LDB1Q86U70 RNU6-237P-201ENST00000515985 71 ntBASIC1.51□□□□□ -2.17
LDB1Q86U70 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.51□□□□□ -2.17
LDB1Q86U70 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.51□□□□□ -2.17
LDB1Q86U70 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
LDB1Q86U70 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
LDB1Q86U70 SNORD81.1-201ENST00000363064 77 ntBASIC1.5□□□□□ -2.17
LDB1Q86U70 Y_RNA.183-201ENST00000363882 113 ntBASIC1.5□□□□□ -2.17
LDB1Q86U70 RNU6-450P-201ENST00000364654 107 ntBASIC1.5□□□□□ -2.17
LDB1Q86U70 SNORD116-13-201ENST00000384408 92 ntBASIC1.5□□□□□ -2.17
LDB1Q86U70 MIR320A-201ENST00000385302 82 ntBASIC1.5□□□□□ -2.17
LDB1Q86U70 SNORA12.1-201ENST00000390873 148 ntBASIC1.5□□□□□ -2.17
LDB1Q86U70 RNA5SP482-201ENST00000391269 118 ntBASIC1.5□□□□□ -2.17
LDB1Q86U70 RNU4-30P-201ENST00000410245 143 ntBASIC1.5□□□□□ -2.17
LDB1Q86U70 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.5□□□□□ -2.17
LDB1Q86U70 AC024067.1-201ENST00000426199 223 ntBASIC1.5□□□□□ -2.17
LDB1Q86U70 AC245517.4-201ENST00000448601 281 ntBASIC1.5□□□□□ -2.17
LDB1Q86U70 AL049830.1-201ENST00000468034 425 ntBASIC1.5□□□□□ -2.17
LDB1Q86U70 SEPT14P8-201ENST00000508026 178 ntBASIC1.5□□□□□ -2.17
LDB1Q86U70 AL645939.4-201ENST00000604495 135 ntBASIC1.5□□□□□ -2.17
LDB1Q86U70 SNORD113-5-201ENST00000607261 78 ntBASIC1.5□□□□□ -2.17
LDB1Q86U70 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
LDB1Q86U70 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
LDB1Q86U70 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
LDB1Q86U70 Y_RNA.172-201ENST00000363765 102 ntBASIC1.49□□□□□ -2.17
LDB1Q86U70 RNU1-42P-201ENST00000364033 160 ntBASIC1.49□□□□□ -2.17
LDB1Q86U70 Y_RNA.202-201ENST00000364083 110 ntBASIC1.49□□□□□ -2.17
LDB1Q86U70 Y_RNA.216-201ENST00000364205 93 ntBASIC1.49□□□□□ -2.17
LDB1Q86U70 RNA5SP259-201ENST00000365541 109 ntBASIC1.49□□□□□ -2.17
LDB1Q86U70 Y_RNA.380-201ENST00000365663 111 ntBASIC1.49□□□□□ -2.17
LDB1Q86U70 SNORA67.5-201ENST00000391036 107 ntBASIC1.49□□□□□ -2.17
LDB1Q86U70 RPS4XP11-201ENST00000446897 772 ntBASIC1.49□□□□□ -2.17
LDB1Q86U70 OR9P1P-201ENST00000496431 281 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms