Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
NUP54Q7Z3B4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
NUP54Q7Z3B4 Y_RNA.11-201ENST00000362375 109 ntBASIC1.49□□□□□ -2.17
NUP54Q7Z3B4 Y_RNA.138-201ENST00000363462 102 ntBASIC1.49□□□□□ -2.17
NUP54Q7Z3B4 SNORD26-201ENST00000384147 75 ntBASIC1.49□□□□□ -2.17
NUP54Q7Z3B4 Y_RNA.645-201ENST00000391229 102 ntBASIC1.49□□□□□ -2.17
NUP54Q7Z3B4 AL034345.1-201ENST00000407768 123 ntBASIC1.49□□□□□ -2.17
NUP54Q7Z3B4 AC004965.1-201ENST00000413033 213 ntBASIC1.49□□□□□ -2.17
NUP54Q7Z3B4 RPL23AP36-201ENST00000413895 458 ntBASIC1.49□□□□□ -2.17
NUP54Q7Z3B4 RNU6-966P-201ENST00000516479 104 ntBASIC1.49□□□□□ -2.17
NUP54Q7Z3B4 Y_RNA.711-201ENST00000516993 102 ntBASIC1.49□□□□□ -2.17
NUP54Q7Z3B4 SNORA28-201ENST00000606769 126 ntBASIC1.49□□□□□ -2.17
NUP54Q7Z3B4 AL021879.1-201ENST00000611756 288 ntBASIC1.49□□□□□ -2.17
NUP54Q7Z3B4 AC021506.2-201ENST00000612354 169 ntBASIC1.49□□□□□ -2.17
NUP54Q7Z3B4 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.49□□□□□ -2.17
NUP54Q7Z3B4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
NUP54Q7Z3B4 RNU6-1123P-201ENST00000362347 106 ntBASIC1.48□□□□□ -2.17
NUP54Q7Z3B4 RNU1-17P-201ENST00000363022 152 ntBASIC1.48□□□□□ -2.17
NUP54Q7Z3B4 SNORA67.5-201ENST00000391036 107 ntBASIC1.48□□□□□ -2.17
NUP54Q7Z3B4 RN7SKP101-201ENST00000411376 320 ntBASIC1.48□□□□□ -2.17
NUP54Q7Z3B4 AL354751.2-201ENST00000415471 210 ntBASIC1.48□□□□□ -2.17
NUP54Q7Z3B4 RNU6-1337P-201ENST00000516525 95 ntBASIC1.48□□□□□ -2.17
NUP54Q7Z3B4 Y_RNA.721-201ENST00000517207 102 ntBASIC1.48□□□□□ -2.17
NUP54Q7Z3B4 AP002004.2-201ENST00000531656 154 ntBASIC1.48□□□□□ -2.17
NUP54Q7Z3B4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.48□□□□□ -2.17
NUP54Q7Z3B4 AC124312.5-201ENST00000604451 268 ntBASIC1.48□□□□□ -2.17
NUP54Q7Z3B4 AC011373.1-201ENST00000607270 237 ntBASIC1.48□□□□□ -2.17
NUP54Q7Z3B4 AL353997.5-201ENST00000618886 171 ntBASIC1.48□□□□□ -2.17
NUP54Q7Z3B4 AC117470.1-201ENST00000381974 330 ntBASIC1.47□□□□□ -2.17
NUP54Q7Z3B4 RNU6-823P-201ENST00000391042 103 ntBASIC1.47□□□□□ -2.17
NUP54Q7Z3B4 RNU6-130P-201ENST00000411112 103 ntBASIC1.47□□□□□ -2.17
NUP54Q7Z3B4 RPL30P13-201ENST00000418873 348 ntBASIC1.47□□□□□ -2.17
NUP54Q7Z3B4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.47□□□□□ -2.17
NUP54Q7Z3B4 SNORD13-201ENST00000459299 104 ntBASIC1.47□□□□□ -2.17
NUP54Q7Z3B4 RNU6-63P-201ENST00000516690 95 ntBASIC1.47□□□□□ -2.17
NUP54Q7Z3B4 RNU7-28P-201ENST00000516759 62 ntBASIC1.47□□□□□ -2.17
NUP54Q7Z3B4 AL358944.1-201ENST00000528537 144 ntBASIC1.47□□□□□ -2.17
NUP54Q7Z3B4 AC015688.6-201ENST00000577737 104 ntBASIC1.47□□□□□ -2.17
NUP54Q7Z3B4 AC104695.3-201ENST00000604052 296 ntBASIC1.47□□□□□ -2.17
NUP54Q7Z3B4 PART1_1.1-201ENST00000611761 217 ntBASIC1.47□□□□□ -2.17
NUP54Q7Z3B4 AP000648.3-201ENST00000623539 4507 ntBASIC1.46□□□□□ -2.18
NUP54Q7Z3B4 Y_RNA.267-201ENST00000364679 109 ntBASIC1.46□□□□□ -2.18
NUP54Q7Z3B4 RNA5SP363-201ENST00000365072 115 ntBASIC1.46□□□□□ -2.18
NUP54Q7Z3B4 Y_RNA.331-201ENST00000365267 102 ntBASIC1.46□□□□□ -2.18
NUP54Q7Z3B4 SNORA22B-201ENST00000383876 138 ntBASIC1.46□□□□□ -2.18
NUP54Q7Z3B4 RNU6-937P-201ENST00000384325 106 ntBASIC1.46□□□□□ -2.18
NUP54Q7Z3B4 SNORA12.1-201ENST00000390873 148 ntBASIC1.46□□□□□ -2.18
NUP54Q7Z3B4 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.46□□□□□ -2.18
NUP54Q7Z3B4 RNU6-101P-201ENST00000410323 104 ntBASIC1.46□□□□□ -2.18
NUP54Q7Z3B4 RNU6-710P-201ENST00000410424 105 ntBASIC1.46□□□□□ -2.18
NUP54Q7Z3B4 AL162725.1-201ENST00000435405 301 ntBASIC1.46□□□□□ -2.18
NUP54Q7Z3B4 PGBD4P5-201ENST00000445958 426 ntBASIC1.46□□□□□ -2.18
NUP54Q7Z3B4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.46□□□□□ -2.18
NUP54Q7Z3B4 RPL30P7-201ENST00000479312 323 ntBASIC1.46□□□□□ -2.18
NUP54Q7Z3B4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.46□□□□□ -2.18
NUP54Q7Z3B4 Y_RNA.701-201ENST00000516812 110 ntBASIC1.46□□□□□ -2.18
NUP54Q7Z3B4 RNU2-56P-201ENST00000516826 190 ntBASIC1.46□□□□□ -2.18
NUP54Q7Z3B4 RNU7-110P-201ENST00000516891 62 ntBASIC1.46□□□□□ -2.18
NUP54Q7Z3B4 Y_RNA.715-201ENST00000517082 110 ntBASIC1.46□□□□□ -2.18
NUP54Q7Z3B4 AC020661.2-201ENST00000560114 134 ntBASIC1.46□□□□□ -2.18
NUP54Q7Z3B4 MIR3171-201ENST00000584270 74 ntBASIC1.46□□□□□ -2.18
NUP54Q7Z3B4 AC040896.1-201ENST00000613819 479 ntBASIC1.46□□□□□ -2.18
NUP54Q7Z3B4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.46□□□□□ -2.18
NUP54Q7Z3B4 Y_RNA.143-201ENST00000363520 106 ntBASIC1.45□□□□□ -2.18
NUP54Q7Z3B4 Y_RNA.329-201ENST00000365209 107 ntBASIC1.45□□□□□ -2.18
NUP54Q7Z3B4 MIR517C-201ENST00000385103 95 ntBASIC1.45□□□□□ -2.18
NUP54Q7Z3B4 MIR1252-201ENST00000408861 65 ntBASIC1.45□□□□□ -2.18
NUP54Q7Z3B4 RNA5SP511-201ENST00000410487 115 ntBASIC1.45□□□□□ -2.18
NUP54Q7Z3B4 RPS27P16-201ENST00000425758 201 ntBASIC1.45□□□□□ -2.18
NUP54Q7Z3B4 STAG3L5P-204ENST00000443759 179 ntBASIC1.45□□□□□ -2.18
NUP54Q7Z3B4 RNU6-1096P-201ENST00000517089 102 ntBASIC1.45□□□□□ -2.18
NUP54Q7Z3B4 AC015720.1-201ENST00000565251 277 ntBASIC1.45□□□□□ -2.18
NUP54Q7Z3B4 SNORD53B-201ENST00000577887 78 ntBASIC1.45□□□□□ -2.18
NUP54Q7Z3B4 AL078604.3-201ENST00000615580 211 ntBASIC1.45□□□□□ -2.18
NUP54Q7Z3B4 AL513423.1-201ENST00000621695 132 ntBASIC1.45□□□□□ -2.18
NUP54Q7Z3B4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.45□□□□□ -2.18
NUP54Q7Z3B4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.45□□□□□ -2.18
NUP54Q7Z3B4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
NUP54Q7Z3B4 SNORA1B-201ENST00000362535 133 ntBASIC1.44□□□□□ -2.18
NUP54Q7Z3B4 Y_RNA.158-201ENST00000363651 101 ntBASIC1.44□□□□□ -2.18
NUP54Q7Z3B4 Y_RNA.380-201ENST00000365663 111 ntBASIC1.44□□□□□ -2.18
NUP54Q7Z3B4 Y_RNA.389-201ENST00000383924 113 ntBASIC1.44□□□□□ -2.18
NUP54Q7Z3B4 RNU6-136P-201ENST00000384663 107 ntBASIC1.44□□□□□ -2.18
NUP54Q7Z3B4 RNU6-21P-201ENST00000384710 107 ntBASIC1.44□□□□□ -2.18
NUP54Q7Z3B4 RNU6-482P-201ENST00000391068 107 ntBASIC1.44□□□□□ -2.18
NUP54Q7Z3B4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.44□□□□□ -2.18
NUP54Q7Z3B4 SNX2P2-201ENST00000424553 323 ntBASIC1.44□□□□□ -2.18
NUP54Q7Z3B4 RNU6-1291P-201ENST00000516591 104 ntBASIC1.44□□□□□ -2.18
NUP54Q7Z3B4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.44□□□□□ -2.18
NUP54Q7Z3B4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.44□□□□□ -2.18
NUP54Q7Z3B4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.44□□□□□ -2.18
NUP54Q7Z3B4 AC073349.3-201ENST00000617616 186 ntBASIC1.44□□□□□ -2.18
NUP54Q7Z3B4 SNORD81.1-201ENST00000363064 77 ntBASIC1.43□□□□□ -2.18
NUP54Q7Z3B4 Y_RNA.183-201ENST00000363882 113 ntBASIC1.43□□□□□ -2.18
NUP54Q7Z3B4 Y_RNA.265-201ENST00000364677 108 ntBASIC1.43□□□□□ -2.18
NUP54Q7Z3B4 SNORD116-13-201ENST00000384408 92 ntBASIC1.43□□□□□ -2.18
NUP54Q7Z3B4 MIR513A1-201ENST00000385138 129 ntBASIC1.43□□□□□ -2.18
NUP54Q7Z3B4 RNA5SP482-201ENST00000391269 118 ntBASIC1.43□□□□□ -2.18
NUP54Q7Z3B4 AC024067.1-201ENST00000426199 223 ntBASIC1.43□□□□□ -2.18
NUP54Q7Z3B4 AL135790.2-201ENST00000437701 267 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms