Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 AC097462.1-201ENST00000514125 324 ntBASIC3.21□□□□□ -1.9
USP31Q70CQ4 SNORA31.26-201ENST00000517250 137 ntBASIC3.21□□□□□ -1.9
USP31Q70CQ4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.21□□□□□ -1.9
USP31Q70CQ4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.21□□□□□ -1.9
USP31Q70CQ4 NDUFA5P6-201ENST00000542110 379 ntBASIC3.21□□□□□ -1.9
USP31Q70CQ4 AC015720.1-201ENST00000565251 277 ntBASIC3.21□□□□□ -1.9
USP31Q70CQ4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
USP31Q70CQ4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
USP31Q70CQ4 AC068700.1-201ENST00000565862 3754 ntBASIC3.2□□□□□ -1.9
USP31Q70CQ4 RNU1-22P-201ENST00000363334 158 ntBASIC3.2□□□□□ -1.9
USP31Q70CQ4 SNORD56.5-201ENST00000364281 72 ntBASIC3.2□□□□□ -1.9
USP31Q70CQ4 RNU6-383P-201ENST00000410864 94 ntBASIC3.2□□□□□ -1.9
USP31Q70CQ4 RPS15AP28-201ENST00000435088 386 ntBASIC3.2□□□□□ -1.9
USP31Q70CQ4 SEPT7P4-201ENST00000437076 306 ntBASIC3.2□□□□□ -1.9
USP31Q70CQ4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.2□□□□□ -1.9
USP31Q70CQ4 RNU6-56P-201ENST00000516986 93 ntBASIC3.2□□□□□ -1.9
USP31Q70CQ4 DEFB122-202ENST00000569013 197 ntBASIC3.2□□□□□ -1.9
USP31Q70CQ4 AL391903.3-201ENST00000612158 163 ntBASIC3.2□□□□□ -1.9
USP31Q70CQ4 U6.73-201ENST00000619194 103 ntBASIC3.2□□□□□ -1.9
USP31Q70CQ4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP31Q70CQ4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
USP31Q70CQ4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
USP31Q70CQ4 AC131280.1-202ENST00000624067 4211 ntBASIC3.19□□□□□ -1.9
USP31Q70CQ4 Y_RNA.398-201ENST00000383952 99 ntBASIC3.19□□□□□ -1.9
USP31Q70CQ4 RNU6-160P-201ENST00000384591 107 ntBASIC3.19□□□□□ -1.9
USP31Q70CQ4 RNU6-417P-201ENST00000384712 107 ntBASIC3.19□□□□□ -1.9
USP31Q70CQ4 RNU6-1228P-201ENST00000391014 107 ntBASIC3.19□□□□□ -1.9
USP31Q70CQ4 AL512604.1-201ENST00000404812 257 ntBASIC3.19□□□□□ -1.9
USP31Q70CQ4 MIR1289-2-201ENST00000408360 111 ntBASIC3.19□□□□□ -1.9
USP31Q70CQ4 AL603825.1-201ENST00000438481 80 ntBASIC3.19□□□□□ -1.9
USP31Q70CQ4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.19□□□□□ -1.9
USP31Q70CQ4 AL121914.1-201ENST00000450188 156 ntBASIC3.19□□□□□ -1.9
USP31Q70CQ4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.19□□□□□ -1.9
USP31Q70CQ4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.19□□□□□ -1.9
USP31Q70CQ4 AC026271.5-201ENST00000577873 130 ntBASIC3.19□□□□□ -1.9
USP31Q70CQ4 MTND1P7-201ENST00000632801 297 ntBASIC3.19□□□□□ -1.9
USP31Q70CQ4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
USP31Q70CQ4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.18□□□□□ -1.9
USP31Q70CQ4 Y_RNA.229-201ENST00000364347 113 ntBASIC3.18□□□□□ -1.9
USP31Q70CQ4 RNU6-117P-201ENST00000365415 107 ntBASIC3.18□□□□□ -1.9
USP31Q70CQ4 RNU6-187P-201ENST00000384139 106 ntBASIC3.18□□□□□ -1.9
USP31Q70CQ4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
USP31Q70CQ4 RNU6-1186P-201ENST00000410429 97 ntBASIC3.18□□□□□ -1.9
USP31Q70CQ4 RNU7-200P-201ENST00000516105 62 ntBASIC3.18□□□□□ -1.9
USP31Q70CQ4 RNU6-453P-201ENST00000516819 85 ntBASIC3.18□□□□□ -1.9
USP31Q70CQ4 MIR4431-201ENST00000579990 94 ntBASIC3.18□□□□□ -1.9
USP31Q70CQ4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
USP31Q70CQ4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
USP31Q70CQ4 snoU2-30.2-201ENST00000362805 70 ntBASIC3.17□□□□□ -1.9
USP31Q70CQ4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.17□□□□□ -1.9
USP31Q70CQ4 RNY1P5-201ENST00000383890 115 ntBASIC3.17□□□□□ -1.9
USP31Q70CQ4 RNU6-449P-201ENST00000383914 107 ntBASIC3.17□□□□□ -1.9
USP31Q70CQ4 SNORA72-201ENST00000384339 132 ntBASIC3.17□□□□□ -1.9
USP31Q70CQ4 AL606845.1-201ENST00000404881 255 ntBASIC3.17□□□□□ -1.9
USP31Q70CQ4 RNU5E-9P-201ENST00000411164 104 ntBASIC3.17□□□□□ -1.9
USP31Q70CQ4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.17□□□□□ -1.9
USP31Q70CQ4 SCARNA8-201ENST00000515924 131 ntBASIC3.17□□□□□ -1.9
USP31Q70CQ4 RNU6-1041P-201ENST00000516254 102 ntBASIC3.17□□□□□ -1.9
USP31Q70CQ4 AC109810.1-201ENST00000534066 224 ntBASIC3.17□□□□□ -1.9
USP31Q70CQ4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
USP31Q70CQ4 MIR340-201ENST00000362125 95 ntBASIC3.16□□□□□ -1.9
USP31Q70CQ4 RNU6-674P-201ENST00000363831 107 ntBASIC3.16□□□□□ -1.9
USP31Q70CQ4 RNU4-84P-201ENST00000364200 139 ntBASIC3.16□□□□□ -1.9
USP31Q70CQ4 RNU4-41P-201ENST00000364426 143 ntBASIC3.16□□□□□ -1.9
USP31Q70CQ4 RNU6-728P-201ENST00000365375 104 ntBASIC3.16□□□□□ -1.9
USP31Q70CQ4 SNORD116-18-201ENST00000383961 92 ntBASIC3.16□□□□□ -1.9
USP31Q70CQ4 RNU6-1072P-201ENST00000384703 107 ntBASIC3.16□□□□□ -1.9
USP31Q70CQ4 RNU6-443P-201ENST00000384780 107 ntBASIC3.16□□□□□ -1.9
USP31Q70CQ4 Y_RNA.580-201ENST00000391004 95 ntBASIC3.16□□□□□ -1.9
USP31Q70CQ4 RNA5SP496-201ENST00000391240 109 ntBASIC3.16□□□□□ -1.9
USP31Q70CQ4 AC023449.1-201ENST00000454464 154 ntBASIC3.16□□□□□ -1.9
USP31Q70CQ4 MIR2681-201ENST00000581814 105 ntBASIC3.16□□□□□ -1.9
USP31Q70CQ4 AC007229.1-201ENST00000590455 412 ntBASIC3.16□□□□□ -1.9
USP31Q70CQ4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
USP31Q70CQ4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.16□□□□□ -1.9
USP31Q70CQ4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
USP31Q70CQ4 SNORA38-201ENST00000363946 132 ntBASIC3.15□□□□□ -1.9
USP31Q70CQ4 MT-TT-201ENST00000387460 66 ntBASIC3.15□□□□□ -1.9
USP31Q70CQ4 SNORA26.7-201ENST00000391288 122 ntBASIC3.15□□□□□ -1.9
USP31Q70CQ4 AL591806.2-201ENST00000433122 173 ntBASIC3.15□□□□□ -1.9
USP31Q70CQ4 AL353689.1-201ENST00000438895 199 ntBASIC3.15□□□□□ -1.9
USP31Q70CQ4 RNU1-131P-201ENST00000458943 161 ntBASIC3.15□□□□□ -1.9
USP31Q70CQ4 AC108210.2-201ENST00000503681 201 ntBASIC3.15□□□□□ -1.9
USP31Q70CQ4 MTND5P41-201ENST00000517498 206 ntBASIC3.15□□□□□ -1.9
USP31Q70CQ4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.15□□□□□ -1.9
USP31Q70CQ4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.15□□□□□ -1.9
USP31Q70CQ4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
USP31Q70CQ4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
USP31Q70CQ4 SNORD114-1-201ENST00000362705 72 ntBASIC3.14□□□□□ -1.91
USP31Q70CQ4 RNY3P5-201ENST00000384127 102 ntBASIC3.14□□□□□ -1.91
USP31Q70CQ4 RNU6-239P-201ENST00000390990 99 ntBASIC3.14□□□□□ -1.91
USP31Q70CQ4 HMGN2P3-201ENST00000433603 273 ntBASIC3.14□□□□□ -1.91
USP31Q70CQ4 HMGN2P5-201ENST00000436882 273 ntBASIC3.14□□□□□ -1.91
USP31Q70CQ4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
USP31Q70CQ4 AC107027.2-201ENST00000512197 115 ntBASIC3.14□□□□□ -1.91
USP31Q70CQ4 RNU1-142P-201ENST00000516682 145 ntBASIC3.14□□□□□ -1.91
USP31Q70CQ4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.14□□□□□ -1.91
USP31Q70CQ4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.14□□□□□ -1.91
USP31Q70CQ4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.14□□□□□ -1.91
USP31Q70CQ4 AL359075.3-201ENST00000613288 217 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms