Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 RNU7-99P-201ENST00000516271 62 ntBASIC2.15□□□□□ -2.07
PTCHD4Q6ZW05 MIR514B-201ENST00000516774 80 ntBASIC2.15□□□□□ -2.07
PTCHD4Q6ZW05 AC022559.1-201ENST00000520905 205 ntBASIC2.15□□□□□ -2.07
PTCHD4Q6ZW05 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.15□□□□□ -2.07
PTCHD4Q6ZW05 LARP7P3-201ENST00000579888 337 ntBASIC2.15□□□□□ -2.07
PTCHD4Q6ZW05 MIR4308-201ENST00000580634 81 ntBASIC2.15□□□□□ -2.07
PTCHD4Q6ZW05 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.15□□□□□ -2.07
PTCHD4Q6ZW05 AL359075.3-201ENST00000613288 217 ntBASIC2.15□□□□□ -2.07
PTCHD4Q6ZW05 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.15□□□□□ -2.07
PTCHD4Q6ZW05 U6.108-201ENST00000637764 58 ntBASIC2.15□□□□□ -2.07
PTCHD4Q6ZW05 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.15□□□□□ -2.07
PTCHD4Q6ZW05 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
PTCHD4Q6ZW05 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.15□□□□□ -2.07
PTCHD4Q6ZW05 MIR597-201ENST00000384968 97 ntBASIC2.14□□□□□ -2.07
PTCHD4Q6ZW05 SNORA40.19-201ENST00000390846 128 ntBASIC2.14□□□□□ -2.07
PTCHD4Q6ZW05 RNA5SP323-201ENST00000391094 133 ntBASIC2.14□□□□□ -2.07
PTCHD4Q6ZW05 AL359511.1-201ENST00000402970 211 ntBASIC2.14□□□□□ -2.07
PTCHD4Q6ZW05 COX6CP10-201ENST00000416832 224 ntBASIC2.14□□□□□ -2.07
PTCHD4Q6ZW05 RPS15AP28-201ENST00000435088 386 ntBASIC2.14□□□□□ -2.07
PTCHD4Q6ZW05 AC099677.2-201ENST00000436385 175 ntBASIC2.14□□□□□ -2.07
PTCHD4Q6ZW05 RPL23AP54-201ENST00000495129 419 ntBASIC2.14□□□□□ -2.07
PTCHD4Q6ZW05 RNU1-142P-201ENST00000516682 145 ntBASIC2.14□□□□□ -2.07
PTCHD4Q6ZW05 RNU7-116P-201ENST00000516940 62 ntBASIC2.14□□□□□ -2.07
PTCHD4Q6ZW05 AC127455.1-201ENST00000565496 145 ntBASIC2.14□□□□□ -2.07
PTCHD4Q6ZW05 AC098479.1-201ENST00000609225 154 ntBASIC2.14□□□□□ -2.07
PTCHD4Q6ZW05 AL359851.1-201ENST00000569460 4997 ntBASIC2.13□□□□□ -2.07
PTCHD4Q6ZW05 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
PTCHD4Q6ZW05 RNU4-17P-201ENST00000365598 141 ntBASIC2.13□□□□□ -2.07
PTCHD4Q6ZW05 RNU6-144P-201ENST00000383951 107 ntBASIC2.13□□□□□ -2.07
PTCHD4Q6ZW05 SNORA8.3-201ENST00000384679 139 ntBASIC2.13□□□□□ -2.07
PTCHD4Q6ZW05 Y_RNA.572-201ENST00000384757 98 ntBASIC2.13□□□□□ -2.07
PTCHD4Q6ZW05 MIR196B-201ENST00000384852 84 ntBASIC2.13□□□□□ -2.07
PTCHD4Q6ZW05 MIR518A2-201ENST00000384966 87 ntBASIC2.13□□□□□ -2.07
PTCHD4Q6ZW05 RNU11-3P-201ENST00000391111 133 ntBASIC2.13□□□□□ -2.07
PTCHD4Q6ZW05 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.13□□□□□ -2.07
PTCHD4Q6ZW05 CST2P1-201ENST00000425770 87 ntBASIC2.13□□□□□ -2.07
PTCHD4Q6ZW05 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.13□□□□□ -2.07
PTCHD4Q6ZW05 RPS4XP11-201ENST00000446897 772 ntBASIC2.13□□□□□ -2.07
PTCHD4Q6ZW05 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.13□□□□□ -2.07
PTCHD4Q6ZW05 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.13□□□□□ -2.07
PTCHD4Q6ZW05 AC021269.2-201ENST00000532318 330 ntBASIC2.13□□□□□ -2.07
PTCHD4Q6ZW05 Y_RNA.802-201ENST00000614892 130 ntBASIC2.13□□□□□ -2.07
PTCHD4Q6ZW05 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PTCHD4Q6ZW05 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
PTCHD4Q6ZW05 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.12□□□□□ -2.07
PTCHD4Q6ZW05 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PTCHD4Q6ZW05 AL365361.1-201ENST00000566942 3481 ntBASIC2.12□□□□□ -2.07
PTCHD4Q6ZW05 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
PTCHD4Q6ZW05 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PTCHD4Q6ZW05 Y_RNA.24-201ENST00000362508 103 ntBASIC2.12□□□□□ -2.07
PTCHD4Q6ZW05 Y_RNA.150-201ENST00000363562 102 ntBASIC2.12□□□□□ -2.07
PTCHD4Q6ZW05 SNORA8-201ENST00000384574 139 ntBASIC2.12□□□□□ -2.07
PTCHD4Q6ZW05 MIR626-201ENST00000385032 94 ntBASIC2.12□□□□□ -2.07
PTCHD4Q6ZW05 HMGN2P39-201ENST00000398005 273 ntBASIC2.12□□□□□ -2.07
PTCHD4Q6ZW05 MIR1283-2-201ENST00000408621 87 ntBASIC2.12□□□□□ -2.07
PTCHD4Q6ZW05 RNA5SP184-201ENST00000411071 108 ntBASIC2.12□□□□□ -2.07
PTCHD4Q6ZW05 AC009310.1-201ENST00000414414 451 ntBASIC2.12□□□□□ -2.07
PTCHD4Q6ZW05 RNU7-120P-201ENST00000459334 63 ntBASIC2.12□□□□□ -2.07
PTCHD4Q6ZW05 AC091021.1-201ENST00000468051 388 ntBASIC2.12□□□□□ -2.07
PTCHD4Q6ZW05 AC104435.1-201ENST00000483483 166 ntBASIC2.12□□□□□ -2.07
PTCHD4Q6ZW05 AC026436.1-201ENST00000510537 270 ntBASIC2.12□□□□□ -2.07
PTCHD4Q6ZW05 RNA5SP148-201ENST00000516527 94 ntBASIC2.12□□□□□ -2.07
PTCHD4Q6ZW05 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.12□□□□□ -2.07
PTCHD4Q6ZW05 AC005786.1-201ENST00000588553 154 ntBASIC2.12□□□□□ -2.07
PTCHD4Q6ZW05 MIR6817-201ENST00000615588 66 ntBASIC2.12□□□□□ -2.07
PTCHD4Q6ZW05 FTX_2.1-201ENST00000618816 94 ntBASIC2.12□□□□□ -2.07
PTCHD4Q6ZW05 MIR1291-201ENST00000627649 87 ntBASIC2.12□□□□□ -2.07
PTCHD4Q6ZW05 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
PTCHD4Q6ZW05 AC016717.2-201ENST00000609089 5141 ntBASIC2.11□□□□□ -2.07
PTCHD4Q6ZW05 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.11□□□□□ -2.07
PTCHD4Q6ZW05 RNA5SP68-201ENST00000363885 119 ntBASIC2.11□□□□□ -2.07
PTCHD4Q6ZW05 RNU6-209P-201ENST00000384118 107 ntBASIC2.11□□□□□ -2.07
PTCHD4Q6ZW05 SNORA72-201ENST00000384339 132 ntBASIC2.11□□□□□ -2.07
PTCHD4Q6ZW05 MIR515-2-201ENST00000384883 83 ntBASIC2.11□□□□□ -2.07
PTCHD4Q6ZW05 MIR515-1-201ENST00000384884 83 ntBASIC2.11□□□□□ -2.07
PTCHD4Q6ZW05 AL512604.1-201ENST00000404812 257 ntBASIC2.11□□□□□ -2.07
PTCHD4Q6ZW05 SNORA11.1-201ENST00000408133 129 ntBASIC2.11□□□□□ -2.07
PTCHD4Q6ZW05 MIR548I3-201ENST00000408378 149 ntBASIC2.11□□□□□ -2.07
PTCHD4Q6ZW05 MIR548I1-201ENST00000408810 149 ntBASIC2.11□□□□□ -2.07
PTCHD4Q6ZW05 RNU6-383P-201ENST00000410864 94 ntBASIC2.11□□□□□ -2.07
PTCHD4Q6ZW05 HMGN2P3-201ENST00000433603 273 ntBASIC2.11□□□□□ -2.07
PTCHD4Q6ZW05 HMGN2P5-201ENST00000436882 273 ntBASIC2.11□□□□□ -2.07
PTCHD4Q6ZW05 AC018634.1-201ENST00000437554 401 ntBASIC2.11□□□□□ -2.07
PTCHD4Q6ZW05 RNU6-861P-201ENST00000516745 106 ntBASIC2.11□□□□□ -2.07
PTCHD4Q6ZW05 RNU6-1096P-201ENST00000517089 102 ntBASIC2.11□□□□□ -2.07
PTCHD4Q6ZW05 AC011604.1-201ENST00000545978 196 ntBASIC2.11□□□□□ -2.07
PTCHD4Q6ZW05 MIR4724-201ENST00000579485 89 ntBASIC2.11□□□□□ -2.07
PTCHD4Q6ZW05 AC103810.6-201ENST00000606708 136 ntBASIC2.11□□□□□ -2.07
PTCHD4Q6ZW05 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.11□□□□□ -2.07
PTCHD4Q6ZW05 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.11□□□□□ -2.07
PTCHD4Q6ZW05 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
PTCHD4Q6ZW05 MIR367-201ENST00000362299 68 ntBASIC2.1□□□□□ -2.07
PTCHD4Q6ZW05 Y_RNA.270-201ENST00000364693 104 ntBASIC2.1□□□□□ -2.07
PTCHD4Q6ZW05 RNU6-969P-201ENST00000383900 105 ntBASIC2.1□□□□□ -2.07
PTCHD4Q6ZW05 MIR526A2-201ENST00000390198 65 ntBASIC2.1□□□□□ -2.07
PTCHD4Q6ZW05 SNORA11.4-201ENST00000408823 129 ntBASIC2.1□□□□□ -2.07
PTCHD4Q6ZW05 RNU2-2P-201ENST00000410396 191 ntBASIC2.1□□□□□ -2.07
PTCHD4Q6ZW05 RNU6-437P-201ENST00000459408 95 ntBASIC2.1□□□□□ -2.07
PTCHD4Q6ZW05 TRBV12-1-201ENST00000479785 344 ntBASIC2.1□□□□□ -2.07
PTCHD4Q6ZW05 AL163195.1-201ENST00000496941 348 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms