Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 RNU6-117P-201ENST00000365415 107 ntBASIC-0.71□□□□□ -2.52
CCDC171Q6TFL3 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.71□□□□□ -2.52
CCDC171Q6TFL3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.71□□□□□ -2.52
CCDC171Q6TFL3 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.71□□□□□ -2.52
CCDC171Q6TFL3 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.71□□□□□ -2.52
CCDC171Q6TFL3 USP9YP25-201ENST00000457708 443 ntBASIC-0.71□□□□□ -2.52
CCDC171Q6TFL3 RNU7-138P-201ENST00000459479 64 ntBASIC-0.71□□□□□ -2.52
CCDC171Q6TFL3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.71□□□□□ -2.52
CCDC171Q6TFL3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.71□□□□□ -2.52
CCDC171Q6TFL3 RNU6-469P-201ENST00000516253 101 ntBASIC-0.71□□□□□ -2.52
CCDC171Q6TFL3 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.71□□□□□ -2.52
CCDC171Q6TFL3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.71□□□□□ -2.52
CCDC171Q6TFL3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.71□□□□□ -2.52
CCDC171Q6TFL3 uc_338.4-201ENST00000616635 176 ntBASIC-0.71□□□□□ -2.52
CCDC171Q6TFL3 MTND1P7-201ENST00000632801 297 ntBASIC-0.71□□□□□ -2.52
CCDC171Q6TFL3 MIR6828-201ENST00000636181 60 ntBASIC-0.71□□□□□ -2.52
CCDC171Q6TFL3 RNU4-92P-201ENST00000363783 136 ntBASIC-0.72□□□□□ -2.52
CCDC171Q6TFL3 RNU6-674P-201ENST00000363831 107 ntBASIC-0.72□□□□□ -2.52
CCDC171Q6TFL3 RNU6-157P-201ENST00000383957 107 ntBASIC-0.72□□□□□ -2.52
CCDC171Q6TFL3 SNORA26.5-201ENST00000391215 123 ntBASIC-0.72□□□□□ -2.52
CCDC171Q6TFL3 MTCYBP4-201ENST00000401524 249 ntBASIC-0.72□□□□□ -2.52
CCDC171Q6TFL3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.72□□□□□ -2.52
CCDC171Q6TFL3 SUMO1P3-201ENST00000439961 304 ntBASIC-0.72□□□□□ -2.52
CCDC171Q6TFL3 RPS29P8-201ENST00000445109 171 ntBASIC-0.72□□□□□ -2.52
CCDC171Q6TFL3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.72□□□□□ -2.52
CCDC171Q6TFL3 SNORD27.1-201ENST00000516319 72 ntBASIC-0.72□□□□□ -2.52
CCDC171Q6TFL3 RNU6-107P-201ENST00000516643 102 ntBASIC-0.72□□□□□ -2.52
CCDC171Q6TFL3 Vault.3-201ENST00000516676 95 ntBASIC-0.72□□□□□ -2.52
CCDC171Q6TFL3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.72□□□□□ -2.52
CCDC171Q6TFL3 Y_RNA.167-201ENST00000363735 109 ntBASIC-0.73□□□□□ -2.53
CCDC171Q6TFL3 RNU4-68P-201ENST00000364314 141 ntBASIC-0.73□□□□□ -2.53
CCDC171Q6TFL3 SNORD114-15-201ENST00000364687 72 ntBASIC-0.73□□□□□ -2.53
CCDC171Q6TFL3 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.73□□□□□ -2.53
CCDC171Q6TFL3 RNU6-784P-201ENST00000384330 106 ntBASIC-0.73□□□□□ -2.53
CCDC171Q6TFL3 MIR522-201ENST00000385071 87 ntBASIC-0.73□□□□□ -2.53
CCDC171Q6TFL3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.73□□□□□ -2.53
CCDC171Q6TFL3 AC022878.1-201ENST00000530684 149 ntBASIC-0.73□□□□□ -2.53
CCDC171Q6TFL3 MIR4752-201ENST00000579672 72 ntBASIC-0.73□□□□□ -2.53
CCDC171Q6TFL3 AC099654.13-201ENST00000639774 207 ntBASIC-0.73□□□□□ -2.53
CCDC171Q6TFL3 RNU5F-6P-201ENST00000362979 116 ntBASIC-0.74□□□□□ -2.53
CCDC171Q6TFL3 Y_RNA.110-201ENST00000363220 99 ntBASIC-0.74□□□□□ -2.53
CCDC171Q6TFL3 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.74□□□□□ -2.53
CCDC171Q6TFL3 SNORA51.10-201ENST00000384418 136 ntBASIC-0.74□□□□□ -2.53
CCDC171Q6TFL3 MIR1-2-201ENST00000384961 85 ntBASIC-0.74□□□□□ -2.53
CCDC171Q6TFL3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.74□□□□□ -2.53
CCDC171Q6TFL3 AL365184.2-201ENST00000431139 435 ntBASIC-0.74□□□□□ -2.53
CCDC171Q6TFL3 GPR143P-201ENST00000434155 205 ntBASIC-0.74□□□□□ -2.53
CCDC171Q6TFL3 MIR18B-201ENST00000454574 71 ntBASIC-0.74□□□□□ -2.53
CCDC171Q6TFL3 RNU7-62P-201ENST00000458856 62 ntBASIC-0.74□□□□□ -2.53
CCDC171Q6TFL3 RNU7-185P-201ENST00000459215 60 ntBASIC-0.74□□□□□ -2.53
CCDC171Q6TFL3 AC090617.3-201ENST00000573670 475 ntBASIC-0.74□□□□□ -2.53
CCDC171Q6TFL3 Z94722.1-201ENST00000604328 474 ntBASIC-0.74□□□□□ -2.53
CCDC171Q6TFL3 U2.17-201ENST00000611454 95 ntBASIC-0.74□□□□□ -2.53
CCDC171Q6TFL3 AL158209.2-201ENST00000619266 216 ntBASIC-0.74□□□□□ -2.53
CCDC171Q6TFL3 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.74□□□□□ -2.53
CCDC171Q6TFL3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.74□□□□□ -2.53
CCDC171Q6TFL3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.75□□□□□ -2.53
CCDC171Q6TFL3 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.75□□□□□ -2.53
CCDC171Q6TFL3 RNU4-30P-201ENST00000410245 143 ntBASIC-0.75□□□□□ -2.53
CCDC171Q6TFL3 AL358934.1-201ENST00000432346 324 ntBASIC-0.75□□□□□ -2.53
CCDC171Q6TFL3 POLR2KP2-201ENST00000438155 177 ntBASIC-0.75□□□□□ -2.53
CCDC171Q6TFL3 SCOCP1-201ENST00000554676 349 ntBASIC-0.75□□□□□ -2.53
CCDC171Q6TFL3 MIR3152-201ENST00000579801 74 ntBASIC-0.75□□□□□ -2.53
CCDC171Q6TFL3 MIR4788-201ENST00000639104 80 ntBASIC-0.75□□□□□ -2.53
CCDC171Q6TFL3 RNU6-501P-201ENST00000364072 100 ntBASIC-0.76□□□□□ -2.53
CCDC171Q6TFL3 SNORD50B-201ENST00000364995 70 ntBASIC-0.76□□□□□ -2.53
CCDC171Q6TFL3 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.76□□□□□ -2.53
CCDC171Q6TFL3 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.76□□□□□ -2.53
CCDC171Q6TFL3 RNU6-1242P-201ENST00000391052 103 ntBASIC-0.76□□□□□ -2.53
CCDC171Q6TFL3 SNORD75.1-201ENST00000408373 60 ntBASIC-0.76□□□□□ -2.53
CCDC171Q6TFL3 ELOCP21-201ENST00000412558 336 ntBASIC-0.76□□□□□ -2.53
CCDC171Q6TFL3 SSR1P2-201ENST00000415208 787 ntBASIC-0.76□□□□□ -2.53
CCDC171Q6TFL3 MTCO1P5-201ENST00000433573 344 ntBASIC-0.76□□□□□ -2.53
CCDC171Q6TFL3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.76□□□□□ -2.53
CCDC171Q6TFL3 GMFBP1-201ENST00000467831 427 ntBASIC-0.76□□□□□ -2.53
CCDC171Q6TFL3 AC116353.2-201ENST00000505332 712 ntBASIC-0.76□□□□□ -2.53
CCDC171Q6TFL3 AC026782.1-201ENST00000512952 449 ntBASIC-0.76□□□□□ -2.53
CCDC171Q6TFL3 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.76□□□□□ -2.53
CCDC171Q6TFL3 SNORA18.4-201ENST00000516440 124 ntBASIC-0.76□□□□□ -2.53
CCDC171Q6TFL3 RNU6-504P-201ENST00000516568 104 ntBASIC-0.76□□□□□ -2.53
CCDC171Q6TFL3 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.76□□□□□ -2.53
CCDC171Q6TFL3 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.76□□□□□ -2.53
CCDC171Q6TFL3 AC006504.8-201ENST00000621046 635 ntBASIC-0.76□□□□□ -2.53
CCDC171Q6TFL3 AC091304.10-201ENST00000641554 121 ntBASIC-0.76□□□□□ -2.53
CCDC171Q6TFL3 AC106754.1-201ENST00000562632 1513 ntBASIC-0.76□□□□□ -2.53
CCDC171Q6TFL3 SNORD115-24-201ENST00000363528 82 ntBASIC-0.77□□□□□ -2.53
CCDC171Q6TFL3 RNU6-1200P-201ENST00000384162 107 ntBASIC-0.77□□□□□ -2.53
CCDC171Q6TFL3 MIR224-201ENST00000384889 81 ntBASIC-0.77□□□□□ -2.53
CCDC171Q6TFL3 RNU6-284P-201ENST00000411105 106 ntBASIC-0.77□□□□□ -2.53
CCDC171Q6TFL3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.77□□□□□ -2.53
CCDC171Q6TFL3 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.77□□□□□ -2.53
CCDC171Q6TFL3 MTCO2P27-201ENST00000420740 428 ntBASIC-0.77□□□□□ -2.53
CCDC171Q6TFL3 USP9YP12-201ENST00000450481 570 ntBASIC-0.77□□□□□ -2.53
CCDC171Q6TFL3 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.77□□□□□ -2.53
CCDC171Q6TFL3 snoU13.19-201ENST00000459148 104 ntBASIC-0.77□□□□□ -2.53
CCDC171Q6TFL3 PRDX4P1-201ENST00000507189 574 ntBASIC-0.77□□□□□ -2.53
CCDC171Q6TFL3 AC046134.1-201ENST00000514454 666 ntBASIC-0.77□□□□□ -2.53
CCDC171Q6TFL3 RNU2-60P-201ENST00000517290 128 ntBASIC-0.77□□□□□ -2.53
CCDC171Q6TFL3 AC007751.1-201ENST00000529260 376 ntBASIC-0.77□□□□□ -2.53
CCDC171Q6TFL3 AC018448.1-201ENST00000552843 316 ntBASIC-0.77□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 197.5 ms