Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.36□□□□□ -1.87
USPL1Q5W0Q7 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.36□□□□□ -1.87
USPL1Q5W0Q7 RNU1-23P-201ENST00000363361 144 ntBASIC3.36□□□□□ -1.87
USPL1Q5W0Q7 Y_RNA.127-201ENST00000363386 109 ntBASIC3.36□□□□□ -1.87
USPL1Q5W0Q7 Y_RNA.203-201ENST00000364106 102 ntBASIC3.36□□□□□ -1.87
USPL1Q5W0Q7 RNA5SP205-201ENST00000364653 136 ntBASIC3.36□□□□□ -1.87
USPL1Q5W0Q7 Y_RNA.432-201ENST00000384087 111 ntBASIC3.36□□□□□ -1.87
USPL1Q5W0Q7 RNU6-735P-201ENST00000410612 107 ntBASIC3.36□□□□□ -1.87
USPL1Q5W0Q7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.36□□□□□ -1.87
USPL1Q5W0Q7 AC245047.4-201ENST00000433189 144 ntBASIC3.36□□□□□ -1.87
USPL1Q5W0Q7 UBL5P3-201ENST00000475112 231 ntBASIC3.36□□□□□ -1.87
USPL1Q5W0Q7 AL355297.2-201ENST00000604792 129 ntBASIC3.36□□□□□ -1.87
USPL1Q5W0Q7 AC138915.1-201ENST00000565427 1685 ntBASIC3.36□□□□□ -1.87
USPL1Q5W0Q7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.35□□□□□ -1.87
USPL1Q5W0Q7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
USPL1Q5W0Q7 MIR26A1-201ENST00000362205 77 ntBASIC3.35□□□□□ -1.87
USPL1Q5W0Q7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
USPL1Q5W0Q7 SNORD116-14-201ENST00000383894 92 ntBASIC3.35□□□□□ -1.87
USPL1Q5W0Q7 SNORD116-17-201ENST00000383929 92 ntBASIC3.35□□□□□ -1.87
USPL1Q5W0Q7 RNU6-1080P-201ENST00000383982 107 ntBASIC3.35□□□□□ -1.87
USPL1Q5W0Q7 SNORD116-15-201ENST00000384445 92 ntBASIC3.35□□□□□ -1.87
USPL1Q5W0Q7 SNORD116-19-201ENST00000384729 92 ntBASIC3.35□□□□□ -1.87
USPL1Q5W0Q7 MIR520G-201ENST00000385064 90 ntBASIC3.35□□□□□ -1.87
USPL1Q5W0Q7 SNORA26-201ENST00000391286 122 ntBASIC3.35□□□□□ -1.87
USPL1Q5W0Q7 RNU2-48P-201ENST00000410694 191 ntBASIC3.35□□□□□ -1.87
USPL1Q5W0Q7 Y_RNA.622-201ENST00000411091 108 ntBASIC3.35□□□□□ -1.87
USPL1Q5W0Q7 AC245102.2-201ENST00000448956 180 ntBASIC3.35□□□□□ -1.87
USPL1Q5W0Q7 AC092991.1-201ENST00000477176 376 ntBASIC3.35□□□□□ -1.87
USPL1Q5W0Q7 RNU6-1299P-201ENST00000516316 100 ntBASIC3.35□□□□□ -1.87
USPL1Q5W0Q7 CTSLP2-204ENST00000629029 392 ntBASIC3.35□□□□□ -1.87
USPL1Q5W0Q7 ZNF702P-202ENST00000434269 1966 ntBASIC3.34□□□□□ -1.87
USPL1Q5W0Q7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.34□□□□□ -1.87
USPL1Q5W0Q7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.34□□□□□ -1.87
USPL1Q5W0Q7 RNU6-484P-201ENST00000384016 107 ntBASIC3.34□□□□□ -1.87
USPL1Q5W0Q7 Y_RNA.542-201ENST00000384641 111 ntBASIC3.34□□□□□ -1.87
USPL1Q5W0Q7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
USPL1Q5W0Q7 AC003685.2-201ENST00000422795 395 ntBASIC3.34□□□□□ -1.87
USPL1Q5W0Q7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.34□□□□□ -1.87
USPL1Q5W0Q7 TRIAP1P1-201ENST00000427062 225 ntBASIC3.34□□□□□ -1.87
USPL1Q5W0Q7 RPS4XP11-201ENST00000446897 772 ntBASIC3.34□□□□□ -1.87
USPL1Q5W0Q7 RNA5SP320-201ENST00000516263 124 ntBASIC3.34□□□□□ -1.87
USPL1Q5W0Q7 RNU6-971P-201ENST00000516920 106 ntBASIC3.34□□□□□ -1.87
USPL1Q5W0Q7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.34□□□□□ -1.87
USPL1Q5W0Q7 uc_338.4-201ENST00000616635 176 ntBASIC3.34□□□□□ -1.87
USPL1Q5W0Q7 AL449363.1-201ENST00000617815 186 ntBASIC3.34□□□□□ -1.87
USPL1Q5W0Q7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
USPL1Q5W0Q7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
USPL1Q5W0Q7 RNU6-743P-201ENST00000364151 106 ntBASIC3.33□□□□□ -1.88
USPL1Q5W0Q7 RNU1-96P-201ENST00000364163 162 ntBASIC3.33□□□□□ -1.88
USPL1Q5W0Q7 Y_RNA.273-201ENST00000364703 102 ntBASIC3.33□□□□□ -1.88
USPL1Q5W0Q7 RNU6-80P-201ENST00000384195 107 ntBASIC3.33□□□□□ -1.88
USPL1Q5W0Q7 Z98742.3-201ENST00000418637 326 ntBASIC3.33□□□□□ -1.88
USPL1Q5W0Q7 RNU6-991P-201ENST00000516168 107 ntBASIC3.33□□□□□ -1.88
USPL1Q5W0Q7 RNA5SP282-201ENST00000516355 108 ntBASIC3.33□□□□□ -1.88
USPL1Q5W0Q7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.33□□□□□ -1.88
USPL1Q5W0Q7 AP001328.1-201ENST00000528550 176 ntBASIC3.33□□□□□ -1.88
USPL1Q5W0Q7 MIR3605-201ENST00000583214 100 ntBASIC3.33□□□□□ -1.88
USPL1Q5W0Q7 AL929325.1-201ENST00000603096 117 ntBASIC3.33□□□□□ -1.88
USPL1Q5W0Q7 U7.2-201ENST00000607576 63 ntBASIC3.33□□□□□ -1.88
USPL1Q5W0Q7 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
USPL1Q5W0Q7 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
USPL1Q5W0Q7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.33□□□□□ -1.88
USPL1Q5W0Q7 Y_RNA.71-201ENST00000362892 104 ntBASIC3.32□□□□□ -1.88
USPL1Q5W0Q7 SNORA25.7-201ENST00000364375 127 ntBASIC3.32□□□□□ -1.88
USPL1Q5W0Q7 DYNLT3P1-201ENST00000378574 347 ntBASIC3.32□□□□□ -1.88
USPL1Q5W0Q7 MIR504-201ENST00000385065 83 ntBASIC3.32□□□□□ -1.88
USPL1Q5W0Q7 SRIP3-201ENST00000413200 219 ntBASIC3.32□□□□□ -1.88
USPL1Q5W0Q7 AL513477.1-202ENST00000417061 214 ntBASIC3.32□□□□□ -1.88
USPL1Q5W0Q7 AL353689.1-201ENST00000438895 199 ntBASIC3.32□□□□□ -1.88
USPL1Q5W0Q7 snoU13.15-201ENST00000459407 104 ntBASIC3.32□□□□□ -1.88
USPL1Q5W0Q7 SNORD77.4-201ENST00000516158 81 ntBASIC3.32□□□□□ -1.88
USPL1Q5W0Q7 AC090142.3-201ENST00000519012 385 ntBASIC3.32□□□□□ -1.88
USPL1Q5W0Q7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.32□□□□□ -1.88
USPL1Q5W0Q7 AC011604.1-201ENST00000545978 196 ntBASIC3.32□□□□□ -1.88
USPL1Q5W0Q7 MIR4662B-201ENST00000579498 81 ntBASIC3.32□□□□□ -1.88
USPL1Q5W0Q7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
USPL1Q5W0Q7 Y_RNA.218-201ENST00000364218 104 ntBASIC3.31□□□□□ -1.88
USPL1Q5W0Q7 SNORD114-30-201ENST00000364448 72 ntBASIC3.31□□□□□ -1.88
USPL1Q5W0Q7 Y_RNA.251-201ENST00000364551 99 ntBASIC3.31□□□□□ -1.88
USPL1Q5W0Q7 RNU6-1180P-201ENST00000364935 107 ntBASIC3.31□□□□□ -1.88
USPL1Q5W0Q7 SNORA20-201ENST00000384662 132 ntBASIC3.31□□□□□ -1.88
USPL1Q5W0Q7 RNU6-588P-201ENST00000410281 105 ntBASIC3.31□□□□□ -1.88
USPL1Q5W0Q7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.31□□□□□ -1.88
USPL1Q5W0Q7 RNU6-1211P-201ENST00000459179 105 ntBASIC3.31□□□□□ -1.88
USPL1Q5W0Q7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.31□□□□□ -1.88
USPL1Q5W0Q7 MIR3117-201ENST00000584034 78 ntBASIC3.31□□□□□ -1.88
USPL1Q5W0Q7 MIR4769-201ENST00000584126 77 ntBASIC3.31□□□□□ -1.88
USPL1Q5W0Q7 AC007229.1-201ENST00000590455 412 ntBASIC3.31□□□□□ -1.88
USPL1Q5W0Q7 AL359881.1-201ENST00000602916 267 ntBASIC3.31□□□□□ -1.88
USPL1Q5W0Q7 AC097639.2-201ENST00000603159 172 ntBASIC3.31□□□□□ -1.88
USPL1Q5W0Q7 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.31□□□□□ -1.88
USPL1Q5W0Q7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.31□□□□□ -1.88
USPL1Q5W0Q7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
USPL1Q5W0Q7 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.31□□□□□ -1.88
USPL1Q5W0Q7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
USPL1Q5W0Q7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
USPL1Q5W0Q7 MIR340-201ENST00000362125 95 ntBASIC3.3□□□□□ -1.88
USPL1Q5W0Q7 RNU6-461P-201ENST00000364195 107 ntBASIC3.3□□□□□ -1.88
USPL1Q5W0Q7 RNU6-136P-201ENST00000384663 107 ntBASIC3.3□□□□□ -1.88
USPL1Q5W0Q7 MIR592-201ENST00000384959 97 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms