Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 snoU2-30.2-201ENST00000362805 70 ntBASIC3.3□□□□□ -1.88
TTC39BQ5VTQ0 MIR548A3-201ENST00000385297 97 ntBASIC3.3□□□□□ -1.88
TTC39BQ5VTQ0 RNA5SP467-201ENST00000391274 118 ntBASIC3.3□□□□□ -1.88
TTC39BQ5VTQ0 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.3□□□□□ -1.88
TTC39BQ5VTQ0 AC018634.1-201ENST00000437554 401 ntBASIC3.3□□□□□ -1.88
TTC39BQ5VTQ0 Y_RNA.651-201ENST00000459380 103 ntBASIC3.3□□□□□ -1.88
TTC39BQ5VTQ0 HMGN1P7-201ENST00000491722 313 ntBASIC3.3□□□□□ -1.88
TTC39BQ5VTQ0 RNU6-1146P-201ENST00000516282 102 ntBASIC3.3□□□□□ -1.88
TTC39BQ5VTQ0 RNU6-504P-201ENST00000516568 104 ntBASIC3.3□□□□□ -1.88
TTC39BQ5VTQ0 RNU6-1291P-201ENST00000516591 104 ntBASIC3.3□□□□□ -1.88
TTC39BQ5VTQ0 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.3□□□□□ -1.88
TTC39BQ5VTQ0 MIR3200-201ENST00000580767 85 ntBASIC3.3□□□□□ -1.88
TTC39BQ5VTQ0 MIR3129-201ENST00000581095 76 ntBASIC3.3□□□□□ -1.88
TTC39BQ5VTQ0 uc_338.25-201ENST00000613756 156 ntBASIC3.3□□□□□ -1.88
TTC39BQ5VTQ0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.3□□□□□ -1.88
TTC39BQ5VTQ0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.3□□□□□ -1.88
TTC39BQ5VTQ0 AC093010.3-201ENST00000570269 15214 ntBASIC3.29□□□□□ -1.88
TTC39BQ5VTQ0 Y_RNA.35-201ENST00000362601 101 ntBASIC3.29□□□□□ -1.88
TTC39BQ5VTQ0 RNU6-147P-201ENST00000383983 107 ntBASIC3.29□□□□□ -1.88
TTC39BQ5VTQ0 SNORD116-21-201ENST00000384507 92 ntBASIC3.29□□□□□ -1.88
TTC39BQ5VTQ0 SNORA12.1-201ENST00000390873 148 ntBASIC3.29□□□□□ -1.88
TTC39BQ5VTQ0 SNRPGP10-201ENST00000432323 225 ntBASIC3.29□□□□□ -1.88
TTC39BQ5VTQ0 RN7SKP19-201ENST00000516016 252 ntBASIC3.29□□□□□ -1.88
TTC39BQ5VTQ0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.29□□□□□ -1.88
TTC39BQ5VTQ0 MIR4679-2-201ENST00000578358 77 ntBASIC3.29□□□□□ -1.88
TTC39BQ5VTQ0 AC007229.1-201ENST00000590455 412 ntBASIC3.29□□□□□ -1.88
TTC39BQ5VTQ0 AL355297.2-201ENST00000604792 129 ntBASIC3.29□□□□□ -1.88
TTC39BQ5VTQ0 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TTC39BQ5VTQ0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TTC39BQ5VTQ0 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TTC39BQ5VTQ0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.28□□□□□ -1.88
TTC39BQ5VTQ0 Y_RNA.253-201ENST00000364562 112 ntBASIC3.28□□□□□ -1.88
TTC39BQ5VTQ0 SNORA7.4-201ENST00000384249 137 ntBASIC3.28□□□□□ -1.88
TTC39BQ5VTQ0 MIR592-201ENST00000384959 97 ntBASIC3.28□□□□□ -1.88
TTC39BQ5VTQ0 MIRLET7F2-201ENST00000385277 83 ntBASIC3.28□□□□□ -1.88
TTC39BQ5VTQ0 SNORD72-201ENST00000390994 80 ntBASIC3.28□□□□□ -1.88
TTC39BQ5VTQ0 RN7SL504P-201ENST00000494496 287 ntBASIC3.28□□□□□ -1.88
TTC39BQ5VTQ0 RNU6-1041P-201ENST00000516254 102 ntBASIC3.28□□□□□ -1.88
TTC39BQ5VTQ0 MIR8057-201ENST00000620957 69 ntBASIC3.28□□□□□ -1.88
TTC39BQ5VTQ0 MIR622-201ENST00000638396 96 ntBASIC3.28□□□□□ -1.88
TTC39BQ5VTQ0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
TTC39BQ5VTQ0 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.28□□□□□ -1.88
TTC39BQ5VTQ0 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.28□□□□□ -1.88
TTC39BQ5VTQ0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
TTC39BQ5VTQ0 SNORD61-201ENST00000384252 73 ntBASIC3.27□□□□□ -1.89
TTC39BQ5VTQ0 RPL21P3-201ENST00000395517 478 ntBASIC3.27□□□□□ -1.89
TTC39BQ5VTQ0 RNU2-63P-201ENST00000410792 194 ntBASIC3.27□□□□□ -1.89
TTC39BQ5VTQ0 RPS15AP28-201ENST00000435088 386 ntBASIC3.27□□□□□ -1.89
TTC39BQ5VTQ0 AF228730.3-201ENST00000436691 102 ntBASIC3.27□□□□□ -1.89
TTC39BQ5VTQ0 AC018868.1-201ENST00000491307 315 ntBASIC3.27□□□□□ -1.89
TTC39BQ5VTQ0 AC096725.1-201ENST00000514266 313 ntBASIC3.27□□□□□ -1.89
TTC39BQ5VTQ0 RNU6-667P-201ENST00000517186 102 ntBASIC3.27□□□□□ -1.89
TTC39BQ5VTQ0 RN7SKP57-201ENST00000517248 293 ntBASIC3.27□□□□□ -1.89
TTC39BQ5VTQ0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.27□□□□□ -1.89
TTC39BQ5VTQ0 AL121890.5-201ENST00000620848 304 ntBASIC3.27□□□□□ -1.89
TTC39BQ5VTQ0 MIR338-201ENST00000636369 67 ntBASIC3.27□□□□□ -1.89
TTC39BQ5VTQ0 U6.108-201ENST00000637764 58 ntBASIC3.27□□□□□ -1.89
TTC39BQ5VTQ0 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.27□□□□□ -1.89
TTC39BQ5VTQ0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TTC39BQ5VTQ0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.26□□□□□ -1.89
TTC39BQ5VTQ0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.26□□□□□ -1.89
TTC39BQ5VTQ0 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.26□□□□□ -1.89
TTC39BQ5VTQ0 MIR561-201ENST00000385216 97 ntBASIC3.26□□□□□ -1.89
TTC39BQ5VTQ0 IGKV1-22-201ENST00000524313 326 ntBASIC3.26□□□□□ -1.89
TTC39BQ5VTQ0 NDUFA5P6-201ENST00000542110 379 ntBASIC3.26□□□□□ -1.89
TTC39BQ5VTQ0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.26□□□□□ -1.89
TTC39BQ5VTQ0 AC008507.4-201ENST00000585464 127 ntBASIC3.26□□□□□ -1.89
TTC39BQ5VTQ0 AC025166.1-201ENST00000612411 163 ntBASIC3.26□□□□□ -1.89
TTC39BQ5VTQ0 MIR6079-201ENST00000635807 62 ntBASIC3.26□□□□□ -1.89
TTC39BQ5VTQ0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.25□□□□□ -1.89
TTC39BQ5VTQ0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
TTC39BQ5VTQ0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
TTC39BQ5VTQ0 RNU6-1292P-201ENST00000383856 107 ntBASIC3.25□□□□□ -1.89
TTC39BQ5VTQ0 RNU6-220P-201ENST00000390919 107 ntBASIC3.25□□□□□ -1.89
TTC39BQ5VTQ0 AL021397.1-201ENST00000451806 248 ntBASIC3.25□□□□□ -1.89
TTC39BQ5VTQ0 RNA5SP236-201ENST00000516169 116 ntBASIC3.25□□□□□ -1.89
TTC39BQ5VTQ0 Y_RNA.666-201ENST00000516187 112 ntBASIC3.25□□□□□ -1.89
TTC39BQ5VTQ0 RNU6-1270P-201ENST00000517128 108 ntBASIC3.25□□□□□ -1.89
TTC39BQ5VTQ0 AL359075.3-201ENST00000613288 217 ntBASIC3.25□□□□□ -1.89
TTC39BQ5VTQ0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.25□□□□□ -1.89
TTC39BQ5VTQ0 AC018630.2-201ENST00000534866 2403 ntBASIC3.24□□□□□ -1.89
TTC39BQ5VTQ0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TTC39BQ5VTQ0 Y_RNA.43-201ENST00000362670 111 ntBASIC3.24□□□□□ -1.89
TTC39BQ5VTQ0 SNORD114-6-201ENST00000364393 72 ntBASIC3.24□□□□□ -1.89
TTC39BQ5VTQ0 Y_RNA.267-201ENST00000364679 109 ntBASIC3.24□□□□□ -1.89
TTC39BQ5VTQ0 Y_RNA.346-201ENST00000365385 112 ntBASIC3.24□□□□□ -1.89
TTC39BQ5VTQ0 RNU1-109P-201ENST00000383960 147 ntBASIC3.24□□□□□ -1.89
TTC39BQ5VTQ0 SNORD15B-201ENST00000384714 146 ntBASIC3.24□□□□□ -1.89
TTC39BQ5VTQ0 SNORA46-201ENST00000384762 135 ntBASIC3.24□□□□□ -1.89
TTC39BQ5VTQ0 MIR548A1-201ENST00000385041 97 ntBASIC3.24□□□□□ -1.89
TTC39BQ5VTQ0 EDDM3CP-201ENST00000415977 425 ntBASIC3.24□□□□□ -1.89
TTC39BQ5VTQ0 MTATP6P21-201ENST00000440681 189 ntBASIC3.24□□□□□ -1.89
TTC39BQ5VTQ0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.24□□□□□ -1.89
TTC39BQ5VTQ0 Y_RNA.649-201ENST00000459077 103 ntBASIC3.24□□□□□ -1.89
TTC39BQ5VTQ0 RNU6-341P-201ENST00000516973 96 ntBASIC3.24□□□□□ -1.89
TTC39BQ5VTQ0 RNA5SP170-201ENST00000517150 101 ntBASIC3.24□□□□□ -1.89
TTC39BQ5VTQ0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.24□□□□□ -1.89
TTC39BQ5VTQ0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.23□□□□□ -1.89
TTC39BQ5VTQ0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.23□□□□□ -1.89
TTC39BQ5VTQ0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms