Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.9□□□□□ -2.27
RFX4Q33E94 Z98949.2-201ENST00000440996 144 ntBASIC0.9□□□□□ -2.27
RFX4Q33E94 RNU6-1053P-201ENST00000515930 101 ntBASIC0.9□□□□□ -2.27
RFX4Q33E94 SNORD116-28-201ENST00000516123 91 ntBASIC0.9□□□□□ -2.27
RFX4Q33E94 RNU6-264P-201ENST00000517134 104 ntBASIC0.9□□□□□ -2.27
RFX4Q33E94 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.9□□□□□ -2.27
RFX4Q33E94 AC122108.2-201ENST00000611946 526 ntBASIC0.9□□□□□ -2.27
RFX4Q33E94 AC011476.5-201ENST00000615594 130 ntBASIC0.9□□□□□ -2.27
RFX4Q33E94 MIR337-201ENST00000362281 93 ntBASIC0.89□□□□□ -2.27
RFX4Q33E94 Y_RNA.172-201ENST00000363765 102 ntBASIC0.89□□□□□ -2.27
RFX4Q33E94 RNY3P4-201ENST00000384428 101 ntBASIC0.89□□□□□ -2.27
RFX4Q33E94 RNA5SP511-201ENST00000410487 115 ntBASIC0.89□□□□□ -2.27
RFX4Q33E94 RNU6-1199P-201ENST00000411249 104 ntBASIC0.89□□□□□ -2.27
RFX4Q33E94 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.89□□□□□ -2.27
RFX4Q33E94 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.89□□□□□ -2.27
RFX4Q33E94 RPEP5-201ENST00000441137 268 ntBASIC0.89□□□□□ -2.27
RFX4Q33E94 AC233266.1-201ENST00000454518 96 ntBASIC0.89□□□□□ -2.27
RFX4Q33E94 Y_RNA.653-201ENST00000459091 95 ntBASIC0.89□□□□□ -2.27
RFX4Q33E94 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.89□□□□□ -2.27
RFX4Q33E94 PRDX4P1-201ENST00000507189 574 ntBASIC0.89□□□□□ -2.27
RFX4Q33E94 RNU6-1337P-201ENST00000516525 95 ntBASIC0.89□□□□□ -2.27
RFX4Q33E94 RNU7-28P-201ENST00000516759 62 ntBASIC0.89□□□□□ -2.27
RFX4Q33E94 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.89□□□□□ -2.27
RFX4Q33E94 AC242852.1-201ENST00000612151 96 ntBASIC0.89□□□□□ -2.27
RFX4Q33E94 AC244015.1-201ENST00000622301 99 ntBASIC0.89□□□□□ -2.27
RFX4Q33E94 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
RFX4Q33E94 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
RFX4Q33E94 SNORD114-7-201ENST00000362520 77 ntBASIC0.88□□□□□ -2.27
RFX4Q33E94 RNY1P10-201ENST00000363268 113 ntBASIC0.88□□□□□ -2.27
RFX4Q33E94 Y_RNA.303-201ENST00000364998 94 ntBASIC0.88□□□□□ -2.27
RFX4Q33E94 RNU6-1310P-201ENST00000384153 107 ntBASIC0.88□□□□□ -2.27
RFX4Q33E94 SNORD116-13-201ENST00000384408 92 ntBASIC0.88□□□□□ -2.27
RFX4Q33E94 RNU6-1297P-201ENST00000384415 104 ntBASIC0.88□□□□□ -2.27
RFX4Q33E94 MIR520G-201ENST00000385064 90 ntBASIC0.88□□□□□ -2.27
RFX4Q33E94 RNY4P36-201ENST00000391116 96 ntBASIC0.88□□□□□ -2.27
RFX4Q33E94 AL354751.2-201ENST00000415471 210 ntBASIC0.88□□□□□ -2.27
RFX4Q33E94 AC096644.2-201ENST00000429278 159 ntBASIC0.88□□□□□ -2.27
RFX4Q33E94 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.88□□□□□ -2.27
RFX4Q33E94 RPS4XP11-201ENST00000446897 772 ntBASIC0.88□□□□□ -2.27
RFX4Q33E94 HSPE1P13-201ENST00000451143 297 ntBASIC0.88□□□□□ -2.27
RFX4Q33E94 SUMO1P2-201ENST00000452524 304 ntBASIC0.88□□□□□ -2.27
RFX4Q33E94 ELOCP24-201ENST00000456370 334 ntBASIC0.88□□□□□ -2.27
RFX4Q33E94 AL049830.1-201ENST00000468034 425 ntBASIC0.88□□□□□ -2.27
RFX4Q33E94 AC048334.1-201ENST00000477975 159 ntBASIC0.88□□□□□ -2.27
RFX4Q33E94 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.88□□□□□ -2.27
RFX4Q33E94 RNU7-12P-201ENST00000516030 62 ntBASIC0.88□□□□□ -2.27
RFX4Q33E94 RNU6-1012P-201ENST00000516606 109 ntBASIC0.88□□□□□ -2.27
RFX4Q33E94 AC090049.2-201ENST00000550377 109 ntBASIC0.88□□□□□ -2.27
RFX4Q33E94 AL022345.2-201ENST00000606307 135 ntBASIC0.88□□□□□ -2.27
RFX4Q33E94 AL132765.2-201ENST00000610812 351 ntBASIC0.88□□□□□ -2.27
RFX4Q33E94 AC025253.1-201ENST00000613623 543 ntBASIC0.88□□□□□ -2.27
RFX4Q33E94 AC240442.1-201ENST00000616055 283 ntBASIC0.88□□□□□ -2.27
RFX4Q33E94 AC012676.2-201ENST00000619258 186 ntBASIC0.88□□□□□ -2.27
RFX4Q33E94 AC027335.2-201ENST00000624030 375 ntBASIC0.88□□□□□ -2.27
RFX4Q33E94 Y_RNA.142-201ENST00000363491 102 ntBASIC0.87□□□□□ -2.27
RFX4Q33E94 RNU6-392P-201ENST00000364926 101 ntBASIC0.87□□□□□ -2.27
RFX4Q33E94 RNU6-53P-201ENST00000365367 106 ntBASIC0.87□□□□□ -2.27
RFX4Q33E94 Y_RNA.363-201ENST00000365529 113 ntBASIC0.87□□□□□ -2.27
RFX4Q33E94 SNORA25-201ENST00000384384 134 ntBASIC0.87□□□□□ -2.27
RFX4Q33E94 MIR526A1-201ENST00000384897 85 ntBASIC0.87□□□□□ -2.27
RFX4Q33E94 RNA5SP482-201ENST00000391269 118 ntBASIC0.87□□□□□ -2.27
RFX4Q33E94 AL031003.1-201ENST00000404229 172 ntBASIC0.87□□□□□ -2.27
RFX4Q33E94 RNU2-54P-201ENST00000410299 190 ntBASIC0.87□□□□□ -2.27
RFX4Q33E94 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.87□□□□□ -2.27
RFX4Q33E94 AL162725.1-201ENST00000435405 301 ntBASIC0.87□□□□□ -2.27
RFX4Q33E94 FCF1P4-201ENST00000448326 183 ntBASIC0.87□□□□□ -2.27
RFX4Q33E94 Y_RNA.638-201ENST00000459374 113 ntBASIC0.87□□□□□ -2.27
RFX4Q33E94 AC005840.1-201ENST00000498412 377 ntBASIC0.87□□□□□ -2.27
RFX4Q33E94 UBL5P1-201ENST00000507979 193 ntBASIC0.87□□□□□ -2.27
RFX4Q33E94 SNORA31.2-201ENST00000516019 134 ntBASIC0.87□□□□□ -2.27
RFX4Q33E94 RNU7-4P-201ENST00000516961 62 ntBASIC0.87□□□□□ -2.27
RFX4Q33E94 RNU6-699P-201ENST00000517081 110 ntBASIC0.87□□□□□ -2.27
RFX4Q33E94 GHRLOS.1-201ENST00000610995 70 ntBASIC0.87□□□□□ -2.27
RFX4Q33E94 AC084781.2-201ENST00000615568 161 ntBASIC0.87□□□□□ -2.27
RFX4Q33E94 U2.1-201ENST00000618978 145 ntBASIC0.87□□□□□ -2.27
RFX4Q33E94 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
RFX4Q33E94 Y_RNA.314-201ENST00000365114 102 ntBASIC0.86□□□□□ -2.27
RFX4Q33E94 RNU6-1080P-201ENST00000383982 107 ntBASIC0.86□□□□□ -2.27
RFX4Q33E94 RNU6-20P-201ENST00000384106 107 ntBASIC0.86□□□□□ -2.27
RFX4Q33E94 Y_RNA.605-201ENST00000410577 105 ntBASIC0.86□□□□□ -2.27
RFX4Q33E94 RNU6-321P-201ENST00000410912 106 ntBASIC0.86□□□□□ -2.27
RFX4Q33E94 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.86□□□□□ -2.27
RFX4Q33E94 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.86□□□□□ -2.27
RFX4Q33E94 AC104332.1-201ENST00000440471 797 ntBASIC0.86□□□□□ -2.27
RFX4Q33E94 Y_RNA.718-201ENST00000517110 102 ntBASIC0.86□□□□□ -2.27
RFX4Q33E94 AC144568.1-201ENST00000520139 137 ntBASIC0.86□□□□□ -2.27
RFX4Q33E94 AL358944.1-201ENST00000528537 144 ntBASIC0.86□□□□□ -2.27
RFX4Q33E94 BX284668.6-201ENST00000606899 438 ntBASIC0.86□□□□□ -2.27
RFX4Q33E94 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.86□□□□□ -2.27
RFX4Q33E94 U6.92-201ENST00000636464 89 ntBASIC0.86□□□□□ -2.27
RFX4Q33E94 MIR1302-1-201ENST00000637932 143 ntBASIC0.86□□□□□ -2.27
RFX4Q33E94 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
RFX4Q33E94 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
RFX4Q33E94 RNU6-626P-201ENST00000363354 107 ntBASIC0.85□□□□□ -2.27
RFX4Q33E94 Y_RNA.259-201ENST00000364619 101 ntBASIC0.85□□□□□ -2.27
RFX4Q33E94 SNORA2.2-201ENST00000365473 135 ntBASIC0.85□□□□□ -2.27
RFX4Q33E94 Y_RNA.387-201ENST00000383918 102 ntBASIC0.85□□□□□ -2.27
RFX4Q33E94 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
RFX4Q33E94 SNORD78.2-201ENST00000391076 69 ntBASIC0.85□□□□□ -2.27
RFX4Q33E94 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms