Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC022709.1-201ENST00000615967 87 ntBASIC1.25□□□□□ -2.21
SHROOM1Q2M3G4 AC244015.1-201ENST00000622301 99 ntBASIC1.25□□□□□ -2.21
SHROOM1Q2M3G4 SNORD3E-202ENST00000627253 216 ntBASIC1.25□□□□□ -2.21
SHROOM1Q2M3G4 Y_RNA.58-201ENST00000362807 102 ntBASIC1.24□□□□□ -2.21
SHROOM1Q2M3G4 Y_RNA.154-201ENST00000363624 102 ntBASIC1.24□□□□□ -2.21
SHROOM1Q2M3G4 RNY3P1-201ENST00000365085 102 ntBASIC1.24□□□□□ -2.21
SHROOM1Q2M3G4 RNY3-201ENST00000365484 102 ntBASIC1.24□□□□□ -2.21
SHROOM1Q2M3G4 Y_RNA.529-201ENST00000384586 119 ntBASIC1.24□□□□□ -2.21
SHROOM1Q2M3G4 RNU6-950P-201ENST00000384651 107 ntBASIC1.24□□□□□ -2.21
SHROOM1Q2M3G4 MIR559-201ENST00000385188 96 ntBASIC1.24□□□□□ -2.21
SHROOM1Q2M3G4 RNY4P36-201ENST00000391116 96 ntBASIC1.24□□□□□ -2.21
SHROOM1Q2M3G4 MIR548J-201ENST00000408833 112 ntBASIC1.24□□□□□ -2.21
SHROOM1Q2M3G4 MTCO3P19-201ENST00000415864 321 ntBASIC1.24□□□□□ -2.21
SHROOM1Q2M3G4 CHEK2P4-201ENST00000450340 246 ntBASIC1.24□□□□□ -2.21
SHROOM1Q2M3G4 Y_RNA.632-201ENST00000459189 102 ntBASIC1.24□□□□□ -2.21
SHROOM1Q2M3G4 AC144568.1-201ENST00000520139 137 ntBASIC1.24□□□□□ -2.21
SHROOM1Q2M3G4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.24□□□□□ -2.21
SHROOM1Q2M3G4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.24□□□□□ -2.21
SHROOM1Q2M3G4 AC093027.1-201ENST00000546698 429 ntBASIC1.24□□□□□ -2.21
SHROOM1Q2M3G4 RPL21P9-201ENST00000556149 474 ntBASIC1.24□□□□□ -2.21
SHROOM1Q2M3G4 CYP3A52P-201ENST00000563326 91 ntBASIC1.24□□□□□ -2.21
SHROOM1Q2M3G4 MIR3973-201ENST00000579824 107 ntBASIC1.24□□□□□ -2.21
SHROOM1Q2M3G4 Y_RNA.265-201ENST00000364677 108 ntBASIC1.23□□□□□ -2.21
SHROOM1Q2M3G4 MIR613-201ENST00000385248 95 ntBASIC1.23□□□□□ -2.21
SHROOM1Q2M3G4 AL034345.1-201ENST00000407768 123 ntBASIC1.23□□□□□ -2.21
SHROOM1Q2M3G4 AL591704.2-201ENST00000421658 181 ntBASIC1.23□□□□□ -2.21
SHROOM1Q2M3G4 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.23□□□□□ -2.21
SHROOM1Q2M3G4 RPEP5-201ENST00000441137 268 ntBASIC1.23□□□□□ -2.21
SHROOM1Q2M3G4 AC093019.1-201ENST00000443135 252 ntBASIC1.23□□□□□ -2.21
SHROOM1Q2M3G4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.23□□□□□ -2.21
SHROOM1Q2M3G4 RPS23P4-201ENST00000487908 423 ntBASIC1.23□□□□□ -2.21
SHROOM1Q2M3G4 RNU7-4P-201ENST00000516961 62 ntBASIC1.23□□□□□ -2.21
SHROOM1Q2M3G4 RBM11P1-201ENST00000604951 799 ntBASIC1.23□□□□□ -2.21
SHROOM1Q2M3G4 AC127459.3-201ENST00000624328 466 ntBASIC1.23□□□□□ -2.21
SHROOM1Q2M3G4 AC006435.5-201ENST00000624486 112 ntBASIC1.23□□□□□ -2.21
SHROOM1Q2M3G4 AC112487.2-201ENST00000637950 304 ntBASIC1.23□□□□□ -2.21
SHROOM1Q2M3G4 AC005592.1-201ENST00000566527 1640 ntBASIC1.22□□□□□ -2.21
SHROOM1Q2M3G4 Y_RNA.101-201ENST00000363154 102 ntBASIC1.22□□□□□ -2.21
SHROOM1Q2M3G4 RNY1-201ENST00000364228 113 ntBASIC1.22□□□□□ -2.21
SHROOM1Q2M3G4 MIR628-201ENST00000385229 95 ntBASIC1.22□□□□□ -2.21
SHROOM1Q2M3G4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.22□□□□□ -2.21
SHROOM1Q2M3G4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.22□□□□□ -2.21
SHROOM1Q2M3G4 CALM2P4-201ENST00000430810 426 ntBASIC1.22□□□□□ -2.21
SHROOM1Q2M3G4 DYNLT3P2-201ENST00000442517 295 ntBASIC1.22□□□□□ -2.21
SHROOM1Q2M3G4 AL137792.2-201ENST00000443484 235 ntBASIC1.22□□□□□ -2.21
SHROOM1Q2M3G4 AC093850.1-201ENST00000454121 251 ntBASIC1.22□□□□□ -2.21
SHROOM1Q2M3G4 ELOCP24-201ENST00000456370 334 ntBASIC1.22□□□□□ -2.21
SHROOM1Q2M3G4 RNU7-94P-201ENST00000459576 63 ntBASIC1.22□□□□□ -2.21
SHROOM1Q2M3G4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.22□□□□□ -2.21
SHROOM1Q2M3G4 AC133104.2-201ENST00000615272 193 ntBASIC1.22□□□□□ -2.21
SHROOM1Q2M3G4 U2.1-201ENST00000618978 145 ntBASIC1.22□□□□□ -2.21
SHROOM1Q2M3G4 MIR6734-201ENST00000621166 68 ntBASIC1.22□□□□□ -2.21
SHROOM1Q2M3G4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SHROOM1Q2M3G4 RNU6-1123P-201ENST00000362347 106 ntBASIC1.21□□□□□ -2.22
SHROOM1Q2M3G4 SNORA1B-201ENST00000362535 133 ntBASIC1.21□□□□□ -2.22
SHROOM1Q2M3G4 RNU6-490P-201ENST00000362985 107 ntBASIC1.21□□□□□ -2.22
SHROOM1Q2M3G4 Y_RNA.354-201ENST00000365448 111 ntBASIC1.21□□□□□ -2.22
SHROOM1Q2M3G4 Y_RNA.661-201ENST00000516003 99 ntBASIC1.21□□□□□ -2.22
SHROOM1Q2M3G4 RNU2-56P-201ENST00000516826 190 ntBASIC1.21□□□□□ -2.22
SHROOM1Q2M3G4 MIR2355-201ENST00000517199 87 ntBASIC1.21□□□□□ -2.22
SHROOM1Q2M3G4 MIR4659A-201ENST00000580269 81 ntBASIC1.21□□□□□ -2.22
SHROOM1Q2M3G4 MIR548S-201ENST00000581352 82 ntBASIC1.21□□□□□ -2.22
SHROOM1Q2M3G4 MIR4801-201ENST00000582704 82 ntBASIC1.21□□□□□ -2.22
SHROOM1Q2M3G4 AC104985.2-201ENST00000620598 500 ntBASIC1.21□□□□□ -2.22
SHROOM1Q2M3G4 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.21□□□□□ -2.22
SHROOM1Q2M3G4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
SHROOM1Q2M3G4 MIR410-201ENST00000362222 80 ntBASIC1.2□□□□□ -2.22
SHROOM1Q2M3G4 RNU6-626P-201ENST00000363354 107 ntBASIC1.2□□□□□ -2.22
SHROOM1Q2M3G4 RNU6-1040P-201ENST00000383974 107 ntBASIC1.2□□□□□ -2.22
SHROOM1Q2M3G4 RNU6-20P-201ENST00000384106 107 ntBASIC1.2□□□□□ -2.22
SHROOM1Q2M3G4 RNU6-1310P-201ENST00000384153 107 ntBASIC1.2□□□□□ -2.22
SHROOM1Q2M3G4 U8.16-201ENST00000391279 133 ntBASIC1.2□□□□□ -2.22
SHROOM1Q2M3G4 MIR873-201ENST00000401120 77 ntBASIC1.2□□□□□ -2.22
SHROOM1Q2M3G4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.2□□□□□ -2.22
SHROOM1Q2M3G4 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.2□□□□□ -2.22
SHROOM1Q2M3G4 AC015922.2-201ENST00000435593 184 ntBASIC1.2□□□□□ -2.22
SHROOM1Q2M3G4 AC092991.1-201ENST00000477176 376 ntBASIC1.2□□□□□ -2.22
SHROOM1Q2M3G4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.2□□□□□ -2.22
SHROOM1Q2M3G4 RNU6-966P-201ENST00000516479 104 ntBASIC1.2□□□□□ -2.22
SHROOM1Q2M3G4 RNA5SP168-201ENST00000516642 112 ntBASIC1.2□□□□□ -2.22
SHROOM1Q2M3G4 RNU6-113P-201ENST00000516653 101 ntBASIC1.2□□□□□ -2.22
SHROOM1Q2M3G4 AL512310.8-201ENST00000550183 120 ntBASIC1.2□□□□□ -2.22
SHROOM1Q2M3G4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.2□□□□□ -2.22
SHROOM1Q2M3G4 AC091178.2-201ENST00000584401 117 ntBASIC1.2□□□□□ -2.22
SHROOM1Q2M3G4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.2□□□□□ -2.22
SHROOM1Q2M3G4 AC073349.3-201ENST00000617616 186 ntBASIC1.2□□□□□ -2.22
SHROOM1Q2M3G4 MIR6788-201ENST00000618842 66 ntBASIC1.2□□□□□ -2.22
SHROOM1Q2M3G4 AC138305.3-201ENST00000624988 240 ntBASIC1.2□□□□□ -2.22
SHROOM1Q2M3G4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SHROOM1Q2M3G4 RNU6-324P-201ENST00000363957 106 ntBASIC1.19□□□□□ -2.22
SHROOM1Q2M3G4 RNU4-38P-201ENST00000364472 129 ntBASIC1.19□□□□□ -2.22
SHROOM1Q2M3G4 Y_RNA.243-201ENST00000364481 109 ntBASIC1.19□□□□□ -2.22
SHROOM1Q2M3G4 Y_RNA.463-201ENST00000384271 102 ntBASIC1.19□□□□□ -2.22
SHROOM1Q2M3G4 RNA5SP511-201ENST00000410487 115 ntBASIC1.19□□□□□ -2.22
SHROOM1Q2M3G4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.19□□□□□ -2.22
SHROOM1Q2M3G4 FCF1P4-201ENST00000448326 183 ntBASIC1.19□□□□□ -2.22
SHROOM1Q2M3G4 RNU6-1278P-201ENST00000516130 107 ntBASIC1.19□□□□□ -2.22
SHROOM1Q2M3G4 RNU6-922P-201ENST00000516753 99 ntBASIC1.19□□□□□ -2.22
SHROOM1Q2M3G4 RNU6-1116P-201ENST00000517269 99 ntBASIC1.19□□□□□ -2.22
SHROOM1Q2M3G4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms