Protein–RNA interactions for Protein: Q15459

SF3A1, Splicing factor 3A subunit 1, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1Q15459 AC021269.2-201ENST00000532318 330 ntBASIC2.69□□□□□ -1.98
SF3A1Q15459 AC091178.2-201ENST00000584401 117 ntBASIC2.69□□□□□ -1.98
SF3A1Q15459 POLR3GP1-201ENST00000594073 261 ntBASIC2.69□□□□□ -1.98
SF3A1Q15459 AC103810.6-201ENST00000606708 136 ntBASIC2.69□□□□□ -1.98
SF3A1Q15459 AC046143.2-201ENST00000609789 160 ntBASIC2.69□□□□□ -1.98
SF3A1Q15459 MIR548AY-201ENST00000617669 107 ntBASIC2.69□□□□□ -1.98
SF3A1Q15459 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.69□□□□□ -1.98
SF3A1Q15459 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.69□□□□□ -1.98
SF3A1Q15459 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
SF3A1Q15459 RNU6-801P-201ENST00000364087 105 ntBASIC2.68□□□□□ -1.98
SF3A1Q15459 Y_RNA.275-201ENST00000364726 110 ntBASIC2.68□□□□□ -1.98
SF3A1Q15459 SNORA4.2-201ENST00000365313 147 ntBASIC2.68□□□□□ -1.98
SF3A1Q15459 RNU6-1289P-201ENST00000384431 106 ntBASIC2.68□□□□□ -1.98
SF3A1Q15459 AL603910.2-201ENST00000407268 136 ntBASIC2.68□□□□□ -1.98
SF3A1Q15459 RNU2-14P-201ENST00000411053 191 ntBASIC2.68□□□□□ -1.98
SF3A1Q15459 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.68□□□□□ -1.98
SF3A1Q15459 AC104332.1-201ENST00000440471 797 ntBASIC2.68□□□□□ -1.98
SF3A1Q15459 RPS27P1-201ENST00000450552 247 ntBASIC2.68□□□□□ -1.98
SF3A1Q15459 RNU7-141P-201ENST00000459304 62 ntBASIC2.68□□□□□ -1.98
SF3A1Q15459 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.68□□□□□ -1.98
SF3A1Q15459 RNU7-116P-201ENST00000516940 62 ntBASIC2.68□□□□□ -1.98
SF3A1Q15459 AC011604.1-201ENST00000545978 196 ntBASIC2.68□□□□□ -1.98
SF3A1Q15459 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.68□□□□□ -1.98
SF3A1Q15459 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.68□□□□□ -1.98
SF3A1Q15459 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.68□□□□□ -1.98
SF3A1Q15459 UBE2WP1-201ENST00000362030 340 ntBASIC2.67□□□□□ -1.98
SF3A1Q15459 MIRLET7G-201ENST00000362280 84 ntBASIC2.67□□□□□ -1.98
SF3A1Q15459 Y_RNA.117-201ENST00000363294 101 ntBASIC2.67□□□□□ -1.98
SF3A1Q15459 RNU6-950P-201ENST00000384651 107 ntBASIC2.67□□□□□ -1.98
SF3A1Q15459 AC009310.1-201ENST00000414414 451 ntBASIC2.67□□□□□ -1.98
SF3A1Q15459 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.67□□□□□ -1.98
SF3A1Q15459 RPL23AP54-201ENST00000495129 419 ntBASIC2.67□□□□□ -1.98
SF3A1Q15459 AC024405.2-202ENST00000532731 184 ntBASIC2.67□□□□□ -1.98
SF3A1Q15459 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.67□□□□□ -1.98
SF3A1Q15459 MIR8054-201ENST00000620877 86 ntBASIC2.67□□□□□ -1.98
SF3A1Q15459 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.67□□□□□ -1.98
SF3A1Q15459 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.67□□□□□ -1.98
SF3A1Q15459 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
SF3A1Q15459 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
SF3A1Q15459 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
SF3A1Q15459 SNORD27-201ENST00000363981 72 ntBASIC2.66□□□□□ -1.98
SF3A1Q15459 RNU6-740P-201ENST00000364734 105 ntBASIC2.66□□□□□ -1.98
SF3A1Q15459 RNU6-1323P-201ENST00000384025 107 ntBASIC2.66□□□□□ -1.98
SF3A1Q15459 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.66□□□□□ -1.98
SF3A1Q15459 snoU13.27-201ENST00000459278 104 ntBASIC2.66□□□□□ -1.98
SF3A1Q15459 AC234781.5-201ENST00000508429 271 ntBASIC2.66□□□□□ -1.98
SF3A1Q15459 Y_RNA.679-201ENST00000516416 91 ntBASIC2.66□□□□□ -1.98
SF3A1Q15459 RNA5SP24-201ENST00000516478 95 ntBASIC2.66□□□□□ -1.98
SF3A1Q15459 AP002004.2-201ENST00000531656 154 ntBASIC2.66□□□□□ -1.98
SF3A1Q15459 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.66□□□□□ -1.98
SF3A1Q15459 SNORD53-201ENST00000579969 78 ntBASIC2.66□□□□□ -1.98
SF3A1Q15459 AL162424.1-201ENST00000602325 221 ntBASIC2.66□□□□□ -1.98
SF3A1Q15459 AC010900.2-201ENST00000604508 210 ntBASIC2.66□□□□□ -1.98
SF3A1Q15459 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.66□□□□□ -1.98
SF3A1Q15459 AC064859.1-201ENST00000624741 174 ntBASIC2.66□□□□□ -1.98
SF3A1Q15459 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SF3A1Q15459 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.98
SF3A1Q15459 Y_RNA.217-201ENST00000364214 105 ntBASIC2.65□□□□□ -1.99
SF3A1Q15459 Y_RNA.277-201ENST00000364754 102 ntBASIC2.65□□□□□ -1.99
SF3A1Q15459 U8.7-201ENST00000364940 136 ntBASIC2.65□□□□□ -1.99
SF3A1Q15459 Y_RNA.307-201ENST00000365022 117 ntBASIC2.65□□□□□ -1.99
SF3A1Q15459 Y_RNA.401-201ENST00000383965 117 ntBASIC2.65□□□□□ -1.99
SF3A1Q15459 SNORA72-201ENST00000384339 132 ntBASIC2.65□□□□□ -1.99
SF3A1Q15459 Y_RNA.562-201ENST00000384695 113 ntBASIC2.65□□□□□ -1.99
SF3A1Q15459 Y_RNA.590-201ENST00000410140 107 ntBASIC2.65□□□□□ -1.99
SF3A1Q15459 Y_RNA.641-201ENST00000459414 105 ntBASIC2.65□□□□□ -1.99
SF3A1Q15459 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.65□□□□□ -1.99
SF3A1Q15459 RNU7-115P-201ENST00000516433 55 ntBASIC2.65□□□□□ -1.99
SF3A1Q15459 MIR4709-201ENST00000577272 72 ntBASIC2.65□□□□□ -1.99
SF3A1Q15459 AL929325.1-201ENST00000603096 117 ntBASIC2.65□□□□□ -1.99
SF3A1Q15459 AP003357.1-201ENST00000604497 148 ntBASIC2.65□□□□□ -1.99
SF3A1Q15459 AL078604.3-201ENST00000615580 211 ntBASIC2.65□□□□□ -1.99
SF3A1Q15459 AC100821.1-201ENST00000523153 2479 ntBASIC2.65□□□□□ -1.99
SF3A1Q15459 SNORA1B-201ENST00000362535 133 ntBASIC2.64□□□□□ -1.99
SF3A1Q15459 RNU6-899P-201ENST00000363947 107 ntBASIC2.64□□□□□ -1.99
SF3A1Q15459 Y_RNA.265-201ENST00000364677 108 ntBASIC2.64□□□□□ -1.99
SF3A1Q15459 RNU6-1080P-201ENST00000383982 107 ntBASIC2.64□□□□□ -1.99
SF3A1Q15459 RNU6-440P-201ENST00000390882 105 ntBASIC2.64□□□□□ -1.99
SF3A1Q15459 RN7SKP200-201ENST00000410564 320 ntBASIC2.64□□□□□ -1.99
SF3A1Q15459 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.64□□□□□ -1.99
SF3A1Q15459 STAG3L5P-204ENST00000443759 179 ntBASIC2.64□□□□□ -1.99
SF3A1Q15459 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.64□□□□□ -1.99
SF3A1Q15459 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.64□□□□□ -1.99
SF3A1Q15459 AC127455.1-201ENST00000565496 145 ntBASIC2.64□□□□□ -1.99
SF3A1Q15459 AP000942.4-201ENST00000604811 241 ntBASIC2.64□□□□□ -1.99
SF3A1Q15459 snoU18.1-201ENST00000629629 71 ntBASIC2.64□□□□□ -1.99
SF3A1Q15459 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SF3A1Q15459 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
SF3A1Q15459 AC005336.3-201ENST00000623833 2679 ntBASIC2.63□□□□□ -1.99
SF3A1Q15459 U8.19-201ENST00000459095 133 ntBASIC2.63□□□□□ -1.99
SF3A1Q15459 UBL5P3-201ENST00000475112 231 ntBASIC2.63□□□□□ -1.99
SF3A1Q15459 RPS27P21-201ENST00000486977 252 ntBASIC2.63□□□□□ -1.99
SF3A1Q15459 RNU1-41P-201ENST00000516161 162 ntBASIC2.63□□□□□ -1.99
SF3A1Q15459 Y_RNA.673-201ENST00000516306 88 ntBASIC2.63□□□□□ -1.99
SF3A1Q15459 RNU1-48P-201ENST00000516400 162 ntBASIC2.63□□□□□ -1.99
SF3A1Q15459 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.63□□□□□ -1.99
SF3A1Q15459 MIR3128-201ENST00000581957 66 ntBASIC2.63□□□□□ -1.99
SF3A1Q15459 MIR4713-201ENST00000582691 75 ntBASIC2.63□□□□□ -1.99
SF3A1Q15459 CTSLP2-204ENST00000629029 392 ntBASIC2.63□□□□□ -1.99
SF3A1Q15459 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms