Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 HSPE1P19-201ENST00000603327 295 ntBASIC0.94□□□□□ -2.26
RAB40BQ12829 AC006380.1-201ENST00000603598 186 ntBASIC0.94□□□□□ -2.26
RAB40BQ12829 AL357312.1-201ENST00000603879 298 ntBASIC0.94□□□□□ -2.26
RAB40BQ12829 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
RAB40BQ12829 RNU4-79P-201ENST00000362764 141 ntBASIC0.93□□□□□ -2.26
RAB40BQ12829 RNU4-41P-201ENST00000364426 143 ntBASIC0.93□□□□□ -2.26
RAB40BQ12829 Y_RNA.599-201ENST00000410489 109 ntBASIC0.93□□□□□ -2.26
RAB40BQ12829 RNU6-1054P-201ENST00000411293 104 ntBASIC0.93□□□□□ -2.26
RAB40BQ12829 FCF1P4-201ENST00000448326 183 ntBASIC0.93□□□□□ -2.26
RAB40BQ12829 RPL39P39-201ENST00000455840 151 ntBASIC0.93□□□□□ -2.26
RAB40BQ12829 RPL30P15-201ENST00000457129 321 ntBASIC0.93□□□□□ -2.26
RAB40BQ12829 RNU7-169P-201ENST00000459456 61 ntBASIC0.93□□□□□ -2.26
RAB40BQ12829 AC005840.1-201ENST00000498412 377 ntBASIC0.93□□□□□ -2.26
RAB40BQ12829 SNORD116-28-201ENST00000516123 91 ntBASIC0.93□□□□□ -2.26
RAB40BQ12829 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
RAB40BQ12829 RNU1-124P-201ENST00000363861 145 ntBASIC0.92□□□□□ -2.26
RAB40BQ12829 Y_RNA.361-201ENST00000365515 120 ntBASIC0.92□□□□□ -2.26
RAB40BQ12829 RNA5SP511-201ENST00000410487 115 ntBASIC0.92□□□□□ -2.26
RAB40BQ12829 Y_RNA.605-201ENST00000410577 105 ntBASIC0.92□□□□□ -2.26
RAB40BQ12829 Y_RNA.621-201ENST00000411065 96 ntBASIC0.92□□□□□ -2.26
RAB40BQ12829 AL354751.2-201ENST00000415471 210 ntBASIC0.92□□□□□ -2.26
RAB40BQ12829 AC245047.7-201ENST00000440265 293 ntBASIC0.92□□□□□ -2.26
RAB40BQ12829 Z98949.2-201ENST00000440996 144 ntBASIC0.92□□□□□ -2.26
RAB40BQ12829 Y_RNA.653-201ENST00000459091 95 ntBASIC0.92□□□□□ -2.26
RAB40BQ12829 RNU6-559P-201ENST00000516151 98 ntBASIC0.92□□□□□ -2.26
RAB40BQ12829 RNU6-1337P-201ENST00000516525 95 ntBASIC0.92□□□□□ -2.26
RAB40BQ12829 RNU6-1116P-201ENST00000517269 99 ntBASIC0.92□□□□□ -2.26
RAB40BQ12829 AC055872.1-201ENST00000570978 278 ntBASIC0.92□□□□□ -2.26
RAB40BQ12829 SNORD114-21-201ENST00000606412 72 ntBASIC0.92□□□□□ -2.26
RAB40BQ12829 AC133104.2-201ENST00000615272 193 ntBASIC0.92□□□□□ -2.26
RAB40BQ12829 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
RAB40BQ12829 SNORD68-201ENST00000363214 84 ntBASIC0.91□□□□□ -2.26
RAB40BQ12829 RNY3P11-201ENST00000364153 102 ntBASIC0.91□□□□□ -2.26
RAB40BQ12829 RNY3P4-201ENST00000384428 101 ntBASIC0.91□□□□□ -2.26
RAB40BQ12829 MIR891A-201ENST00000401237 79 ntBASIC0.91□□□□□ -2.26
RAB40BQ12829 AL031003.1-201ENST00000404229 172 ntBASIC0.91□□□□□ -2.26
RAB40BQ12829 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.91□□□□□ -2.26
RAB40BQ12829 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.91□□□□□ -2.26
RAB40BQ12829 MTCO3P10-201ENST00000455912 772 ntBASIC0.91□□□□□ -2.26
RAB40BQ12829 AC093852.1-201ENST00000503587 266 ntBASIC0.91□□□□□ -2.26
RAB40BQ12829 RNU6-470P-201ENST00000515954 104 ntBASIC0.91□□□□□ -2.26
RAB40BQ12829 AC113139.1-201ENST00000605049 239 ntBASIC0.91□□□□□ -2.26
RAB40BQ12829 Y_RNA.101-201ENST00000363154 102 ntBASIC0.9□□□□□ -2.27
RAB40BQ12829 Y_RNA.314-201ENST00000365114 102 ntBASIC0.9□□□□□ -2.27
RAB40BQ12829 RNU6-1080P-201ENST00000383982 107 ntBASIC0.9□□□□□ -2.27
RAB40BQ12829 Y_RNA.474-201ENST00000384341 102 ntBASIC0.9□□□□□ -2.27
RAB40BQ12829 RNU6-163P-201ENST00000384396 106 ntBASIC0.9□□□□□ -2.27
RAB40BQ12829 MIR628-201ENST00000385229 95 ntBASIC0.9□□□□□ -2.27
RAB40BQ12829 SNORD78.2-201ENST00000391076 69 ntBASIC0.9□□□□□ -2.27
RAB40BQ12829 RNU2-54P-201ENST00000410299 190 ntBASIC0.9□□□□□ -2.27
RAB40BQ12829 AL162725.1-201ENST00000435405 301 ntBASIC0.9□□□□□ -2.27
RAB40BQ12829 AC098614.3-201ENST00000438957 440 ntBASIC0.9□□□□□ -2.27
RAB40BQ12829 RPEP5-201ENST00000441137 268 ntBASIC0.9□□□□□ -2.27
RAB40BQ12829 RPS4XP11-201ENST00000446897 772 ntBASIC0.9□□□□□ -2.27
RAB40BQ12829 RPS23P4-201ENST00000487908 423 ntBASIC0.9□□□□□ -2.27
RAB40BQ12829 CYCTP-201ENST00000504253 315 ntBASIC0.9□□□□□ -2.27
RAB40BQ12829 PRDX4P1-201ENST00000507189 574 ntBASIC0.9□□□□□ -2.27
RAB40BQ12829 FAM106DP-201ENST00000586416 501 ntBASIC0.9□□□□□ -2.27
RAB40BQ12829 AC005176.2-201ENST00000596933 147 ntBASIC0.9□□□□□ -2.27
RAB40BQ12829 AC120024.3-201ENST00000603167 156 ntBASIC0.9□□□□□ -2.27
RAB40BQ12829 AC240442.1-201ENST00000616055 283 ntBASIC0.9□□□□□ -2.27
RAB40BQ12829 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
RAB40BQ12829 RNU6-833P-201ENST00000363486 107 ntBASIC0.89□□□□□ -2.27
RAB40BQ12829 RNU6-1297P-201ENST00000384415 104 ntBASIC0.89□□□□□ -2.27
RAB40BQ12829 RNU6-1105P-201ENST00000384774 107 ntBASIC0.89□□□□□ -2.27
RAB40BQ12829 MIR526A1-201ENST00000384897 85 ntBASIC0.89□□□□□ -2.27
RAB40BQ12829 AC063976.4-201ENST00000421971 163 ntBASIC0.89□□□□□ -2.27
RAB40BQ12829 MRPS18CP6-201ENST00000423587 223 ntBASIC0.89□□□□□ -2.27
RAB40BQ12829 PIGPP3-201ENST00000425307 415 ntBASIC0.89□□□□□ -2.27
RAB40BQ12829 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.89□□□□□ -2.27
RAB40BQ12829 LINC01399-202ENST00000458450 244 ntBASIC0.89□□□□□ -2.27
RAB40BQ12829 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.89□□□□□ -2.27
RAB40BQ12829 AC011476.5-201ENST00000615594 130 ntBASIC0.89□□□□□ -2.27
RAB40BQ12829 U2.1-201ENST00000618978 145 ntBASIC0.89□□□□□ -2.27
RAB40BQ12829 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.89□□□□□ -2.27
RAB40BQ12829 AC091895.1-201ENST00000624494 256 ntBASIC0.89□□□□□ -2.27
RAB40BQ12829 RNU6-324P-201ENST00000363957 106 ntBASIC0.88□□□□□ -2.27
RAB40BQ12829 RNU4-38P-201ENST00000364472 129 ntBASIC0.88□□□□□ -2.27
RAB40BQ12829 RNU6-20P-201ENST00000384106 107 ntBASIC0.88□□□□□ -2.27
RAB40BQ12829 SNORD12-201ENST00000391002 90 ntBASIC0.88□□□□□ -2.27
RAB40BQ12829 SNORD79.1-201ENST00000516069 84 ntBASIC0.88□□□□□ -2.27
RAB40BQ12829 RNU6-155P-201ENST00000516347 100 ntBASIC0.88□□□□□ -2.27
RAB40BQ12829 SNORD111.1-201ENST00000516421 86 ntBASIC0.88□□□□□ -2.27
RAB40BQ12829 SNORA20.3-201ENST00000516880 132 ntBASIC0.88□□□□□ -2.27
RAB40BQ12829 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.88□□□□□ -2.27
RAB40BQ12829 MIR4781-201ENST00000585250 76 ntBASIC0.88□□□□□ -2.27
RAB40BQ12829 AC025253.1-201ENST00000613623 543 ntBASIC0.88□□□□□ -2.27
RAB40BQ12829 AC027279.3-201ENST00000625055 122 ntBASIC0.88□□□□□ -2.27
RAB40BQ12829 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.88□□□□□ -2.27
RAB40BQ12829 RNU6-626P-201ENST00000363354 107 ntBASIC0.87□□□□□ -2.27
RAB40BQ12829 Y_RNA.259-201ENST00000364619 101 ntBASIC0.87□□□□□ -2.27
RAB40BQ12829 SNORD116-13-201ENST00000384408 92 ntBASIC0.87□□□□□ -2.27
RAB40BQ12829 MIR19B1-201ENST00000384829 87 ntBASIC0.87□□□□□ -2.27
RAB40BQ12829 AC087343.1-201ENST00000477341 475 ntBASIC0.87□□□□□ -2.27
RAB40BQ12829 HMGN1P7-201ENST00000491722 313 ntBASIC0.87□□□□□ -2.27
RAB40BQ12829 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.87□□□□□ -2.27
RAB40BQ12829 AC114811.1-201ENST00000507207 168 ntBASIC0.87□□□□□ -2.27
RAB40BQ12829 RNU6-1012P-201ENST00000516606 109 ntBASIC0.87□□□□□ -2.27
RAB40BQ12829 AC011604.1-201ENST00000545978 196 ntBASIC0.87□□□□□ -2.27
RAB40BQ12829 AL355073.2-201ENST00000612106 557 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 214.2 ms