Protein–RNA interactions for Protein: Q08ER8

ZNF543, Zinc finger protein 543, humanhuman

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF543Q08ER8 AC010900.2-201ENST00000604508 210 ntBASIC2.14□□□□□ -2.07
ZNF543Q08ER8 AC018630.2-201ENST00000534866 2403 ntBASIC2.14□□□□□ -2.07
ZNF543Q08ER8 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
ZNF543Q08ER8 Y_RNA.133-201ENST00000363428 110 ntBASIC2.13□□□□□ -2.07
ZNF543Q08ER8 RNU4-13P-201ENST00000364019 141 ntBASIC2.13□□□□□ -2.07
ZNF543Q08ER8 RNU6-117P-201ENST00000365415 107 ntBASIC2.13□□□□□ -2.07
ZNF543Q08ER8 RNU6-296P-201ENST00000384608 107 ntBASIC2.13□□□□□ -2.07
ZNF543Q08ER8 Y_RNA.541-201ENST00000384640 113 ntBASIC2.13□□□□□ -2.07
ZNF543Q08ER8 MIR520G-201ENST00000385064 90 ntBASIC2.13□□□□□ -2.07
ZNF543Q08ER8 RNU6-1203P-201ENST00000410703 110 ntBASIC2.13□□□□□ -2.07
ZNF543Q08ER8 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.13□□□□□ -2.07
ZNF543Q08ER8 RPL36AP21-201ENST00000490372 323 ntBASIC2.13□□□□□ -2.07
ZNF543Q08ER8 AC108210.2-201ENST00000503681 201 ntBASIC2.13□□□□□ -2.07
ZNF543Q08ER8 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.13□□□□□ -2.07
ZNF543Q08ER8 RNU6-570P-201ENST00000517051 105 ntBASIC2.13□□□□□ -2.07
ZNF543Q08ER8 AL512605.2-201ENST00000592972 256 ntBASIC2.13□□□□□ -2.07
ZNF543Q08ER8 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
ZNF543Q08ER8 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
ZNF543Q08ER8 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
ZNF543Q08ER8 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
ZNF543Q08ER8 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.13□□□□□ -2.07
ZNF543Q08ER8 AL596028.1-201ENST00000326971 197 ntBASIC2.12□□□□□ -2.07
ZNF543Q08ER8 SNORA25.1-201ENST00000362326 128 ntBASIC2.12□□□□□ -2.07
ZNF543Q08ER8 RNU4-80P-201ENST00000363200 141 ntBASIC2.12□□□□□ -2.07
ZNF543Q08ER8 RNA5SP138-201ENST00000365098 114 ntBASIC2.12□□□□□ -2.07
ZNF543Q08ER8 Y_RNA.341-201ENST00000365341 102 ntBASIC2.12□□□□□ -2.07
ZNF543Q08ER8 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.12□□□□□ -2.07
ZNF543Q08ER8 Y_RNA.456-201ENST00000384232 111 ntBASIC2.12□□□□□ -2.07
ZNF543Q08ER8 Y_RNA.556-201ENST00000384677 113 ntBASIC2.12□□□□□ -2.07
ZNF543Q08ER8 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
ZNF543Q08ER8 MTCYBP9-201ENST00000431021 303 ntBASIC2.12□□□□□ -2.07
ZNF543Q08ER8 RPS27P21-201ENST00000486977 252 ntBASIC2.12□□□□□ -2.07
ZNF543Q08ER8 MIR4299-201ENST00000577899 72 ntBASIC2.12□□□□□ -2.07
ZNF543Q08ER8 MIR3145-201ENST00000580727 82 ntBASIC2.12□□□□□ -2.07
ZNF543Q08ER8 AL162730.1-201ENST00000605734 292 ntBASIC2.12□□□□□ -2.07
ZNF543Q08ER8 AL627230.6-201ENST00000611129 280 ntBASIC2.12□□□□□ -2.07
ZNF543Q08ER8 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.12□□□□□ -2.07
ZNF543Q08ER8 MIR6079-201ENST00000635807 62 ntBASIC2.12□□□□□ -2.07
ZNF543Q08ER8 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
ZNF543Q08ER8 RNA5SP432-201ENST00000362480 116 ntBASIC2.11□□□□□ -2.07
ZNF543Q08ER8 Y_RNA.368-201ENST00000365547 113 ntBASIC2.11□□□□□ -2.07
ZNF543Q08ER8 Y_RNA.376-201ENST00000365638 108 ntBASIC2.11□□□□□ -2.07
ZNF543Q08ER8 Y_RNA.418-201ENST00000384029 102 ntBASIC2.11□□□□□ -2.07
ZNF543Q08ER8 Y_RNA.461-201ENST00000384263 103 ntBASIC2.11□□□□□ -2.07
ZNF543Q08ER8 AL162725.1-201ENST00000435405 301 ntBASIC2.11□□□□□ -2.07
ZNF543Q08ER8 MTND3P2-201ENST00000438452 342 ntBASIC2.11□□□□□ -2.07
ZNF543Q08ER8 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.11□□□□□ -2.07
ZNF543Q08ER8 RNU6-63P-201ENST00000516690 95 ntBASIC2.11□□□□□ -2.07
ZNF543Q08ER8 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.11□□□□□ -2.07
ZNF543Q08ER8 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
ZNF543Q08ER8 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
ZNF543Q08ER8 Y_RNA.512-201ENST00000384518 102 ntBASIC2.1□□□□□ -2.07
ZNF543Q08ER8 RNU6-136P-201ENST00000384663 107 ntBASIC2.1□□□□□ -2.07
ZNF543Q08ER8 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.1□□□□□ -2.07
ZNF543Q08ER8 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.1□□□□□ -2.07
ZNF543Q08ER8 RNA5SP511-201ENST00000410487 115 ntBASIC2.1□□□□□ -2.07
ZNF543Q08ER8 AL356379.1-201ENST00000414105 126 ntBASIC2.1□□□□□ -2.07
ZNF543Q08ER8 AC245047.3-201ENST00000429428 127 ntBASIC2.1□□□□□ -2.07
ZNF543Q08ER8 FTH1P12-201ENST00000432137 551 ntBASIC2.1□□□□□ -2.07
ZNF543Q08ER8 SNORA31.17-201ENST00000516953 127 ntBASIC2.1□□□□□ -2.07
ZNF543Q08ER8 RNU6-341P-201ENST00000516973 96 ntBASIC2.1□□□□□ -2.07
ZNF543Q08ER8 RNU6-548P-201ENST00000517083 115 ntBASIC2.1□□□□□ -2.07
ZNF543Q08ER8 MIR4713-201ENST00000582691 75 ntBASIC2.1□□□□□ -2.07
ZNF543Q08ER8 MIR4769-201ENST00000584126 77 ntBASIC2.1□□□□□ -2.07
ZNF543Q08ER8 AC005972.2-201ENST00000604690 348 ntBASIC2.1□□□□□ -2.07
ZNF543Q08ER8 AC084768.2-201ENST00000622736 221 ntBASIC2.1□□□□□ -2.07
ZNF543Q08ER8 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.1□□□□□ -2.07
ZNF543Q08ER8 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.07
ZNF543Q08ER8 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
ZNF543Q08ER8 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.09□□□□□ -2.07
ZNF543Q08ER8 SNORA16.1-201ENST00000364597 132 ntBASIC2.09□□□□□ -2.07
ZNF543Q08ER8 RNA5SP109-201ENST00000391010 116 ntBASIC2.09□□□□□ -2.07
ZNF543Q08ER8 COX6CP10-201ENST00000416832 224 ntBASIC2.09□□□□□ -2.07
ZNF543Q08ER8 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.09□□□□□ -2.07
ZNF543Q08ER8 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.09□□□□□ -2.07
ZNF543Q08ER8 MTCO1P5-201ENST00000433573 344 ntBASIC2.09□□□□□ -2.07
ZNF543Q08ER8 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.09□□□□□ -2.07
ZNF543Q08ER8 HSPE1P9-201ENST00000440046 311 ntBASIC2.09□□□□□ -2.07
ZNF543Q08ER8 RPS20P10-201ENST00000451209 253 ntBASIC2.09□□□□□ -2.07
ZNF543Q08ER8 AC091021.1-201ENST00000468051 388 ntBASIC2.09□□□□□ -2.07
ZNF543Q08ER8 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.09□□□□□ -2.07
ZNF543Q08ER8 RNU6-191P-201ENST00000516295 94 ntBASIC2.09□□□□□ -2.07
ZNF543Q08ER8 RNU6-1338P-201ENST00000516328 91 ntBASIC2.09□□□□□ -2.07
ZNF543Q08ER8 AC136628.3-201ENST00000521868 290 ntBASIC2.09□□□□□ -2.07
ZNF543Q08ER8 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.09□□□□□ -2.07
ZNF543Q08ER8 AC022217.4-201ENST00000604389 163 ntBASIC2.09□□□□□ -2.07
ZNF543Q08ER8 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
ZNF543Q08ER8 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
ZNF543Q08ER8 AL391987.6-201ENST00000305671 199 ntBASIC2.08□□□□□ -2.08
ZNF543Q08ER8 Y_RNA.310-201ENST00000365063 113 ntBASIC2.08□□□□□ -2.08
ZNF543Q08ER8 RNU6-360P-201ENST00000390944 104 ntBASIC2.08□□□□□ -2.08
ZNF543Q08ER8 MRPS17P9-201ENST00000511924 393 ntBASIC2.08□□□□□ -2.08
ZNF543Q08ER8 SERF1AP1-201ENST00000514575 187 ntBASIC2.08□□□□□ -2.08
ZNF543Q08ER8 RNU6-250P-201ENST00000516958 103 ntBASIC2.08□□□□□ -2.08
ZNF543Q08ER8 RNU6-1096P-201ENST00000517089 102 ntBASIC2.08□□□□□ -2.08
ZNF543Q08ER8 RNA5SP437-201ENST00000517249 129 ntBASIC2.08□□□□□ -2.08
ZNF543Q08ER8 AL358944.1-201ENST00000528537 144 ntBASIC2.08□□□□□ -2.08
ZNF543Q08ER8 AL161670.1-201ENST00000554348 137 ntBASIC2.08□□□□□ -2.08
ZNF543Q08ER8 AC015720.1-201ENST00000565251 277 ntBASIC2.08□□□□□ -2.08
ZNF543Q08ER8 AC022254.1-201ENST00000567857 235 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms