Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 U2.3-201ENST00000617785 191 ntBASIC2.07□□□□□ -2.08
LTBQ06643 U2.19-201ENST00000618602 191 ntBASIC2.07□□□□□ -2.08
LTBQ06643 RNU2-1-201ENST00000618664 191 ntBASIC2.07□□□□□ -2.08
LTBQ06643 U2.6-201ENST00000619225 191 ntBASIC2.07□□□□□ -2.08
LTBQ06643 U2.5-201ENST00000619465 191 ntBASIC2.07□□□□□ -2.08
LTBQ06643 U2.10-201ENST00000620268 191 ntBASIC2.07□□□□□ -2.08
LTBQ06643 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.07□□□□□ -2.08
LTBQ06643 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LTBQ06643 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.06□□□□□ -2.08
LTBQ06643 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
LTBQ06643 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.06□□□□□ -2.08
LTBQ06643 Y_RNA.7-201ENST00000362352 102 ntBASIC2.06□□□□□ -2.08
LTBQ06643 Y_RNA.456-201ENST00000384232 111 ntBASIC2.06□□□□□ -2.08
LTBQ06643 MIR873-201ENST00000401120 77 ntBASIC2.06□□□□□ -2.08
LTBQ06643 RNU6-394P-201ENST00000410735 107 ntBASIC2.06□□□□□ -2.08
LTBQ06643 RPL23AP7-203ENST00000449021 469 ntBASIC2.06□□□□□ -2.08
LTBQ06643 RNU7-141P-201ENST00000459304 62 ntBASIC2.06□□□□□ -2.08
LTBQ06643 AC091021.1-201ENST00000468051 388 ntBASIC2.06□□□□□ -2.08
LTBQ06643 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.06□□□□□ -2.08
LTBQ06643 MTND5P41-201ENST00000517498 206 ntBASIC2.06□□□□□ -2.08
LTBQ06643 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.06□□□□□ -2.08
LTBQ06643 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.06□□□□□ -2.08
LTBQ06643 MIR6766-201ENST00000622641 72 ntBASIC2.06□□□□□ -2.08
LTBQ06643 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
LTBQ06643 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
LTBQ06643 Z82209.1-201ENST00000422141 2135 ntBASIC2.06□□□□□ -2.08
LTBQ06643 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LTBQ06643 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.06□□□□□ -2.08
LTBQ06643 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
LTBQ06643 ZNF720P1-201ENST00000562403 1939 ntBASIC2.05□□□□□ -2.08
LTBQ06643 AL356292.1-201ENST00000283110 373 ntBASIC2.05□□□□□ -2.08
LTBQ06643 SNORA27.1-201ENST00000362604 124 ntBASIC2.05□□□□□ -2.08
LTBQ06643 snoU2_19.4-201ENST00000364329 80 ntBASIC2.05□□□□□ -2.08
LTBQ06643 U8.7-201ENST00000364940 136 ntBASIC2.05□□□□□ -2.08
LTBQ06643 RNU6-438P-201ENST00000365561 103 ntBASIC2.05□□□□□ -2.08
LTBQ06643 SNORD116-13-201ENST00000384408 92 ntBASIC2.05□□□□□ -2.08
LTBQ06643 RNU6-381P-201ENST00000391259 108 ntBASIC2.05□□□□□ -2.08
LTBQ06643 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.05□□□□□ -2.08
LTBQ06643 RNU5E-9P-201ENST00000411164 104 ntBASIC2.05□□□□□ -2.08
LTBQ06643 RPS20P10-201ENST00000451209 253 ntBASIC2.05□□□□□ -2.08
LTBQ06643 AC114982.1-201ENST00000469402 321 ntBASIC2.05□□□□□ -2.08
LTBQ06643 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.05□□□□□ -2.08
LTBQ06643 AC010598.1-201ENST00000510378 103 ntBASIC2.05□□□□□ -2.08
LTBQ06643 SNORA70.12-201ENST00000516084 153 ntBASIC2.05□□□□□ -2.08
LTBQ06643 RNU6-948P-201ENST00000516374 107 ntBASIC2.05□□□□□ -2.08
LTBQ06643 RNU6-1337P-201ENST00000516525 95 ntBASIC2.05□□□□□ -2.08
LTBQ06643 RNA5SP490-201ENST00000517141 136 ntBASIC2.05□□□□□ -2.08
LTBQ06643 AC025647.1-201ENST00000517879 253 ntBASIC2.05□□□□□ -2.08
LTBQ06643 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.05□□□□□ -2.08
LTBQ06643 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.05□□□□□ -2.08
LTBQ06643 MIR3144-201ENST00000579460 79 ntBASIC2.05□□□□□ -2.08
LTBQ06643 MIR3684-201ENST00000579779 74 ntBASIC2.05□□□□□ -2.08
LTBQ06643 FO624990.1-201ENST00000636373 85 ntBASIC2.05□□□□□ -2.08
LTBQ06643 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.05□□□□□ -2.08
LTBQ06643 MIR340-201ENST00000362125 95 ntBASIC2.04□□□□□ -2.08
LTBQ06643 Y_RNA.8-201ENST00000362353 102 ntBASIC2.04□□□□□ -2.08
LTBQ06643 SNORD114-7-201ENST00000362520 77 ntBASIC2.04□□□□□ -2.08
LTBQ06643 RNU6-899P-201ENST00000363947 107 ntBASIC2.04□□□□□ -2.08
LTBQ06643 Y_RNA.293-201ENST00000364908 93 ntBASIC2.04□□□□□ -2.08
LTBQ06643 RNU4-17P-201ENST00000365598 141 ntBASIC2.04□□□□□ -2.08
LTBQ06643 Y_RNA.398-201ENST00000383952 99 ntBASIC2.04□□□□□ -2.08
LTBQ06643 Y_RNA.412-201ENST00000384001 104 ntBASIC2.04□□□□□ -2.08
LTBQ06643 Y_RNA.441-201ENST00000384123 112 ntBASIC2.04□□□□□ -2.08
LTBQ06643 RNU1-52P-201ENST00000384190 164 ntBASIC2.04□□□□□ -2.08
LTBQ06643 MIR626-201ENST00000385032 94 ntBASIC2.04□□□□□ -2.08
LTBQ06643 AL355497.1-201ENST00000406262 551 ntBASIC2.04□□□□□ -2.08
LTBQ06643 MTCO1P44-201ENST00000441935 243 ntBASIC2.04□□□□□ -2.08
LTBQ06643 AL392103.1-201ENST00000447000 198 ntBASIC2.04□□□□□ -2.08
LTBQ06643 AC010531.2-201ENST00000465012 153 ntBASIC2.04□□□□□ -2.08
LTBQ06643 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.04□□□□□ -2.08
LTBQ06643 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.04□□□□□ -2.08
LTBQ06643 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.04□□□□□ -2.08
LTBQ06643 SCARNA8-201ENST00000515924 131 ntBASIC2.04□□□□□ -2.08
LTBQ06643 RNU6-346P-201ENST00000516288 111 ntBASIC2.04□□□□□ -2.08
LTBQ06643 RNU6-406P-201ENST00000516470 107 ntBASIC2.04□□□□□ -2.08
LTBQ06643 U4atac.1-201ENST00000618345 95 ntBASIC2.04□□□□□ -2.08
LTBQ06643 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LTBQ06643 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
LTBQ06643 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
LTBQ06643 MIR337-201ENST00000362281 93 ntBASIC2.03□□□□□ -2.08
LTBQ06643 Y_RNA.24-201ENST00000362508 103 ntBASIC2.03□□□□□ -2.08
LTBQ06643 Y_RNA.182-201ENST00000363880 111 ntBASIC2.03□□□□□ -2.08
LTBQ06643 Y_RNA.796-201ENST00000364268 102 ntBASIC2.03□□□□□ -2.08
LTBQ06643 SNORA67.1-201ENST00000364749 141 ntBASIC2.03□□□□□ -2.08
LTBQ06643 Y_RNA.799-201ENST00000364992 102 ntBASIC2.03□□□□□ -2.08
LTBQ06643 RNU6-1235P-201ENST00000384559 107 ntBASIC2.03□□□□□ -2.08
LTBQ06643 SNORA40.19-201ENST00000390846 128 ntBASIC2.03□□□□□ -2.08
LTBQ06643 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.03□□□□□ -2.08
LTBQ06643 HSPE1P21-201ENST00000438283 308 ntBASIC2.03□□□□□ -2.08
LTBQ06643 AC074290.1-201ENST00000448883 135 ntBASIC2.03□□□□□ -2.08
LTBQ06643 CYP2C59P-201ENST00000457790 269 ntBASIC2.03□□□□□ -2.08
LTBQ06643 RNU6-498P-201ENST00000459468 107 ntBASIC2.03□□□□□ -2.08
LTBQ06643 RPS26P55-201ENST00000471178 356 ntBASIC2.03□□□□□ -2.08
LTBQ06643 AC117454.1-201ENST00000491120 168 ntBASIC2.03□□□□□ -2.08
LTBQ06643 AC018868.1-201ENST00000491307 315 ntBASIC2.03□□□□□ -2.08
LTBQ06643 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.03□□□□□ -2.08
LTBQ06643 AC093259.1-201ENST00000509755 300 ntBASIC2.03□□□□□ -2.08
LTBQ06643 RNA5SP20-201ENST00000515976 84 ntBASIC2.03□□□□□ -2.08
LTBQ06643 RNU6-63P-201ENST00000516690 95 ntBASIC2.03□□□□□ -2.08
LTBQ06643 RNU6-453P-201ENST00000516819 85 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 269.5 ms