Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.95□□□□□ -2.56
HIST1H1AQ02539 AC091144.1-201ENST00000519573 138 ntBASIC-0.95□□□□□ -2.56
HIST1H1AQ02539 AC016597.2-201ENST00000613256 341 ntBASIC-0.95□□□□□ -2.56
HIST1H1AQ02539 AC127459.3-201ENST00000624328 466 ntBASIC-0.95□□□□□ -2.56
HIST1H1AQ02539 MTND1P7-201ENST00000632801 297 ntBASIC-0.95□□□□□ -2.56
HIST1H1AQ02539 SEPT14P19-203ENST00000633205 211 ntBASIC-0.95□□□□□ -2.56
HIST1H1AQ02539 SNORD114-11-201ENST00000363738 75 ntBASIC-0.96□□□□□ -2.56
HIST1H1AQ02539 MIR1257-201ENST00000408490 117 ntBASIC-0.96□□□□□ -2.56
HIST1H1AQ02539 GMFBP1-201ENST00000467831 427 ntBASIC-0.96□□□□□ -2.56
HIST1H1AQ02539 AC091179.3-201ENST00000474761 144 ntBASIC-0.96□□□□□ -2.56
HIST1H1AQ02539 AC016550.1-201ENST00000505348 785 ntBASIC-0.96□□□□□ -2.56
HIST1H1AQ02539 AC046134.1-201ENST00000514454 666 ntBASIC-0.96□□□□□ -2.56
HIST1H1AQ02539 Y_RNA.672-201ENST00000516289 104 ntBASIC-0.96□□□□□ -2.56
HIST1H1AQ02539 SNORD27.1-201ENST00000516319 72 ntBASIC-0.96□□□□□ -2.56
HIST1H1AQ02539 AC090572.1-201ENST00000519251 160 ntBASIC-0.96□□□□□ -2.56
HIST1H1AQ02539 AL049777.1-201ENST00000622740 518 ntBASIC-0.96□□□□□ -2.56
HIST1H1AQ02539 AL391099.1-201ENST00000624635 187 ntBASIC-0.96□□□□□ -2.56
HIST1H1AQ02539 AC010332.2-201ENST00000613083 1904 ntBASIC-0.96□□□□□ -2.56
HIST1H1AQ02539 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.97□□□□□ -2.56
HIST1H1AQ02539 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.97□□□□□ -2.56
HIST1H1AQ02539 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.97□□□□□ -2.56
HIST1H1AQ02539 MT-TQ-201ENST00000387372 72 ntBASIC-0.97□□□□□ -2.56
HIST1H1AQ02539 RNU6-757P-201ENST00000410334 100 ntBASIC-0.97□□□□□ -2.56
HIST1H1AQ02539 RN7SKP142-201ENST00000411236 328 ntBASIC-0.97□□□□□ -2.56
HIST1H1AQ02539 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.97□□□□□ -2.56
HIST1H1AQ02539 AL358934.1-201ENST00000432346 324 ntBASIC-0.97□□□□□ -2.56
HIST1H1AQ02539 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-0.97□□□□□ -2.56
HIST1H1AQ02539 SCARNA18-201ENST00000459004 134 ntBASIC-0.97□□□□□ -2.56
HIST1H1AQ02539 RNU7-167P-201ENST00000459160 62 ntBASIC-0.97□□□□□ -2.56
HIST1H1AQ02539 RNU7-138P-201ENST00000459479 64 ntBASIC-0.97□□□□□ -2.56
HIST1H1AQ02539 PRDX4P1-201ENST00000507189 574 ntBASIC-0.97□□□□□ -2.56
HIST1H1AQ02539 RNU6-276P-201ENST00000516114 96 ntBASIC-0.97□□□□□ -2.56
HIST1H1AQ02539 RNU6-135P-201ENST00000516769 101 ntBASIC-0.97□□□□□ -2.56
HIST1H1AQ02539 RNA5SP47-201ENST00000517230 109 ntBASIC-0.97□□□□□ -2.56
HIST1H1AQ02539 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.97□□□□□ -2.56
HIST1H1AQ02539 MIR4432-201ENST00000581823 84 ntBASIC-0.97□□□□□ -2.56
HIST1H1AQ02539 MIR548AD-201ENST00000584780 82 ntBASIC-0.97□□□□□ -2.56
HIST1H1AQ02539 AC005771.1-201ENST00000585581 349 ntBASIC-0.97□□□□□ -2.56
HIST1H1AQ02539 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.97□□□□□ -2.56
HIST1H1AQ02539 MIR6514-201ENST00000622549 70 ntBASIC-0.97□□□□□ -2.56
HIST1H1AQ02539 MIR522-201ENST00000385071 87 ntBASIC-0.98□□□□□ -2.57
HIST1H1AQ02539 MTCYBP4-201ENST00000401524 249 ntBASIC-0.98□□□□□ -2.57
HIST1H1AQ02539 SNORA19.3-201ENST00000516165 130 ntBASIC-0.98□□□□□ -2.57
HIST1H1AQ02539 RNU2-12P-201ENST00000517216 168 ntBASIC-0.98□□□□□ -2.57
HIST1H1AQ02539 CR383656.4-201ENST00000546909 122 ntBASIC-0.98□□□□□ -2.57
HIST1H1AQ02539 AC006380.1-201ENST00000603598 186 ntBASIC-0.98□□□□□ -2.57
HIST1H1AQ02539 FAM157A-202ENST00000615155 405 ntBASIC-0.98□□□□□ -2.57
HIST1H1AQ02539 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.98□□□□□ -2.57
HIST1H1AQ02539 Y_RNA.18-201ENST00000362461 102 ntBASIC-0.99□□□□□ -2.57
HIST1H1AQ02539 RNA5SP368-201ENST00000364298 116 ntBASIC-0.99□□□□□ -2.57
HIST1H1AQ02539 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.99□□□□□ -2.57
HIST1H1AQ02539 RNU6-735P-201ENST00000410612 107 ntBASIC-0.99□□□□□ -2.57
HIST1H1AQ02539 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.99□□□□□ -2.57
HIST1H1AQ02539 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.99□□□□□ -2.57
HIST1H1AQ02539 Z95118.1-201ENST00000421372 247 ntBASIC-0.99□□□□□ -2.57
HIST1H1AQ02539 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.99□□□□□ -2.57
HIST1H1AQ02539 AL365184.2-201ENST00000431139 435 ntBASIC-0.99□□□□□ -2.57
HIST1H1AQ02539 AC091959.1-201ENST00000495857 238 ntBASIC-0.99□□□□□ -2.57
HIST1H1AQ02539 AC105417.1-201ENST00000514691 285 ntBASIC-0.99□□□□□ -2.57
HIST1H1AQ02539 Z94722.1-201ENST00000604328 474 ntBASIC-0.99□□□□□ -2.57
HIST1H1AQ02539 MTND5P32-201ENST00000560711 1802 ntBASIC-1□□□□□ -2.57
HIST1H1AQ02539 MIR148A-201ENST00000362215 68 ntBASIC-1□□□□□ -2.57
HIST1H1AQ02539 RNU6-1317P-201ENST00000364582 104 ntBASIC-1□□□□□ -2.57
HIST1H1AQ02539 snoU2-30.1-201ENST00000365012 70 ntBASIC-1□□□□□ -2.57
HIST1H1AQ02539 RNU6-784P-201ENST00000384330 106 ntBASIC-1□□□□□ -2.57
HIST1H1AQ02539 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1□□□□□ -2.57
HIST1H1AQ02539 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1□□□□□ -2.57
HIST1H1AQ02539 SCARNA11.2-201ENST00000517183 154 ntBASIC-1□□□□□ -2.57
HIST1H1AQ02539 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1□□□□□ -2.57
HIST1H1AQ02539 MIR4703-201ENST00000577728 79 ntBASIC-1□□□□□ -2.57
HIST1H1AQ02539 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1□□□□□ -2.57
HIST1H1AQ02539 AC121247.2-201ENST00000604776 136 ntBASIC-1□□□□□ -2.57
HIST1H1AQ02539 AC009878.1-201ENST00000621819 340 ntBASIC-1□□□□□ -2.57
HIST1H1AQ02539 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1□□□□□ -2.57
HIST1H1AQ02539 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.01□□□□□ -2.57
HIST1H1AQ02539 SNORD95.1-201ENST00000364099 68 ntBASIC-1.01□□□□□ -2.57
HIST1H1AQ02539 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.01□□□□□ -2.57
HIST1H1AQ02539 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.01□□□□□ -2.57
HIST1H1AQ02539 RNU5A-6P-201ENST00000384136 116 ntBASIC-1.01□□□□□ -2.57
HIST1H1AQ02539 MCFD2P1-201ENST00000417812 300 ntBASIC-1.01□□□□□ -2.57
HIST1H1AQ02539 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.01□□□□□ -2.57
HIST1H1AQ02539 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.01□□□□□ -2.57
HIST1H1AQ02539 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.01□□□□□ -2.57
HIST1H1AQ02539 AC074198.2-201ENST00000508153 258 ntBASIC-1.01□□□□□ -2.57
HIST1H1AQ02539 RNU6-107P-201ENST00000516643 102 ntBASIC-1.01□□□□□ -2.57
HIST1H1AQ02539 MIR3925-201ENST00000584674 77 ntBASIC-1.01□□□□□ -2.57
HIST1H1AQ02539 MIR4791-201ENST00000607666 84 ntBASIC-1.01□□□□□ -2.57
HIST1H1AQ02539 MIR6740-201ENST00000618268 113 ntBASIC-1.01□□□□□ -2.57
HIST1H1AQ02539 RNU6-660P-201ENST00000364566 109 ntBASIC-1.02□□□□□ -2.57
HIST1H1AQ02539 RPL21P38-201ENST00000418090 167 ntBASIC-1.02□□□□□ -2.57
HIST1H1AQ02539 AC090844.1-201ENST00000422019 156 ntBASIC-1.02□□□□□ -2.57
HIST1H1AQ02539 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-1.02□□□□□ -2.57
HIST1H1AQ02539 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.02□□□□□ -2.57
HIST1H1AQ02539 RNU6-329P-201ENST00000459618 107 ntBASIC-1.02□□□□□ -2.57
HIST1H1AQ02539 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-1.02□□□□□ -2.57
HIST1H1AQ02539 HSPE1P23-201ENST00000509838 286 ntBASIC-1.02□□□□□ -2.57
HIST1H1AQ02539 AC022306.2-201ENST00000617563 647 ntBASIC-1.02□□□□□ -2.57
HIST1H1AQ02539 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.02□□□□□ -2.57
HIST1H1AQ02539 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.03□□□□□ -2.57
HIST1H1AQ02539 RNU6-280P-201ENST00000364145 104 ntBASIC-1.03□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms