Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC019129.1-201ENST00000403786 261 ntBASIC1.53□□□□□ -2.16
CX3CL1P78423 FTH1P12-201ENST00000432137 551 ntBASIC1.53□□□□□ -2.16
CX3CL1P78423 JTBP1-201ENST00000441314 247 ntBASIC1.53□□□□□ -2.16
CX3CL1P78423 AL731563.1-201ENST00000442202 214 ntBASIC1.53□□□□□ -2.16
CX3CL1P78423 RPS20P10-201ENST00000451209 253 ntBASIC1.53□□□□□ -2.16
CX3CL1P78423 MTATP8P1-201ENST00000467115 207 ntBASIC1.53□□□□□ -2.16
CX3CL1P78423 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.53□□□□□ -2.16
CX3CL1P78423 RNU6-1143P-201ENST00000516125 104 ntBASIC1.53□□□□□ -2.16
CX3CL1P78423 RNU1-41P-201ENST00000516161 162 ntBASIC1.53□□□□□ -2.16
CX3CL1P78423 RNU1-48P-201ENST00000516400 162 ntBASIC1.53□□□□□ -2.16
CX3CL1P78423 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CX3CL1P78423 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.53□□□□□ -2.16
CX3CL1P78423 AC007742.2-201ENST00000618226 398 ntBASIC1.53□□□□□ -2.16
CX3CL1P78423 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.53□□□□□ -2.16
CX3CL1P78423 AC095038.3-201ENST00000634439 195 ntBASIC1.53□□□□□ -2.16
CX3CL1P78423 AC092881.1-201ENST00000638218 2733 ntBASIC1.53□□□□□ -2.16
CX3CL1P78423 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CX3CL1P78423 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.53□□□□□ -2.17
CX3CL1P78423 MIR424-201ENST00000362227 98 ntBASIC1.52□□□□□ -2.17
CX3CL1P78423 Y_RNA.310-201ENST00000365063 113 ntBASIC1.52□□□□□ -2.17
CX3CL1P78423 RNU6-290P-201ENST00000365212 101 ntBASIC1.52□□□□□ -2.17
CX3CL1P78423 Y_RNA.368-201ENST00000365547 113 ntBASIC1.52□□□□□ -2.17
CX3CL1P78423 RNU6-738P-201ENST00000384531 106 ntBASIC1.52□□□□□ -2.17
CX3CL1P78423 RNU6-1031P-201ENST00000384773 107 ntBASIC1.52□□□□□ -2.17
CX3CL1P78423 MIR562-201ENST00000384894 95 ntBASIC1.52□□□□□ -2.17
CX3CL1P78423 MIR1267-201ENST00000408723 78 ntBASIC1.52□□□□□ -2.17
CX3CL1P78423 RN7SKP200-201ENST00000410564 320 ntBASIC1.52□□□□□ -2.17
CX3CL1P78423 AC024067.1-201ENST00000426199 223 ntBASIC1.52□□□□□ -2.17
CX3CL1P78423 STAG3L5P-204ENST00000443759 179 ntBASIC1.52□□□□□ -2.17
CX3CL1P78423 RPS4XP11-201ENST00000446897 772 ntBASIC1.52□□□□□ -2.17
CX3CL1P78423 AC005908.1-201ENST00000468701 347 ntBASIC1.52□□□□□ -2.17
CX3CL1P78423 HMGN1P10-201ENST00000474557 553 ntBASIC1.52□□□□□ -2.17
CX3CL1P78423 AP003733.2-201ENST00000529409 171 ntBASIC1.52□□□□□ -2.17
CX3CL1P78423 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.52□□□□□ -2.17
CX3CL1P78423 AP002004.2-201ENST00000531656 154 ntBASIC1.52□□□□□ -2.17
CX3CL1P78423 MIR3122-201ENST00000577243 73 ntBASIC1.52□□□□□ -2.17
CX3CL1P78423 AC021506.2-201ENST00000612354 169 ntBASIC1.52□□□□□ -2.17
CX3CL1P78423 AC100821.1-201ENST00000523153 2479 ntBASIC1.52□□□□□ -2.17
CX3CL1P78423 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.52□□□□□ -2.17
CX3CL1P78423 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CX3CL1P78423 ZNF355P-201ENST00000427301 3216 ntBASIC1.51□□□□□ -2.17
CX3CL1P78423 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.51□□□□□ -2.17
CX3CL1P78423 Y_RNA.145-201ENST00000363527 102 ntBASIC1.51□□□□□ -2.17
CX3CL1P78423 RNU4-13P-201ENST00000364019 141 ntBASIC1.51□□□□□ -2.17
CX3CL1P78423 Y_RNA.341-201ENST00000365341 102 ntBASIC1.51□□□□□ -2.17
CX3CL1P78423 Y_RNA.541-201ENST00000384640 113 ntBASIC1.51□□□□□ -2.17
CX3CL1P78423 AL161935.2-201ENST00000414627 60 ntBASIC1.51□□□□□ -2.17
CX3CL1P78423 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.51□□□□□ -2.17
CX3CL1P78423 SCARNA15.1-201ENST00000516384 125 ntBASIC1.51□□□□□ -2.17
CX3CL1P78423 RNU2-56P-201ENST00000516826 190 ntBASIC1.51□□□□□ -2.17
CX3CL1P78423 SNORA44.1-201ENST00000517031 108 ntBASIC1.51□□□□□ -2.17
CX3CL1P78423 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.51□□□□□ -2.17
CX3CL1P78423 MIR3198-2-201ENST00000577868 80 ntBASIC1.51□□□□□ -2.17
CX3CL1P78423 SNORA77B-201ENST00000578179 125 ntBASIC1.51□□□□□ -2.17
CX3CL1P78423 AL360085.1-201ENST00000604713 532 ntBASIC1.51□□□□□ -2.17
CX3CL1P78423 SNORD114-1-201ENST00000362705 72 ntBASIC1.5□□□□□ -2.17
CX3CL1P78423 Y_RNA.136-201ENST00000363444 102 ntBASIC1.5□□□□□ -2.17
CX3CL1P78423 Y_RNA.456-201ENST00000384232 111 ntBASIC1.5□□□□□ -2.17
CX3CL1P78423 Y_RNA.569-201ENST00000384749 103 ntBASIC1.5□□□□□ -2.17
CX3CL1P78423 MIR194-1-201ENST00000384892 85 ntBASIC1.5□□□□□ -2.17
CX3CL1P78423 RNU6-1109P-201ENST00000391187 107 ntBASIC1.5□□□□□ -2.17
CX3CL1P78423 MIR548F4-201ENST00000408515 105 ntBASIC1.5□□□□□ -2.17
CX3CL1P78423 DYNLT3P2-201ENST00000442517 295 ntBASIC1.5□□□□□ -2.17
CX3CL1P78423 AC233266.1-201ENST00000454518 96 ntBASIC1.5□□□□□ -2.17
CX3CL1P78423 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.5□□□□□ -2.17
CX3CL1P78423 MTND5P22-201ENST00000458380 195 ntBASIC1.5□□□□□ -2.17
CX3CL1P78423 RNU6-635P-201ENST00000516651 102 ntBASIC1.5□□□□□ -2.17
CX3CL1P78423 AC008737.2-201ENST00000599446 118 ntBASIC1.5□□□□□ -2.17
CX3CL1P78423 AC242852.1-201ENST00000612151 96 ntBASIC1.5□□□□□ -2.17
CX3CL1P78423 AC244015.1-201ENST00000622301 99 ntBASIC1.5□□□□□ -2.17
CX3CL1P78423 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.5□□□□□ -2.17
CX3CL1P78423 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
CX3CL1P78423 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
CX3CL1P78423 Y_RNA.512-201ENST00000384518 102 ntBASIC1.49□□□□□ -2.17
CX3CL1P78423 AL034345.1-201ENST00000407768 123 ntBASIC1.49□□□□□ -2.17
CX3CL1P78423 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.49□□□□□ -2.17
CX3CL1P78423 AL445685.2-201ENST00000422551 342 ntBASIC1.49□□□□□ -2.17
CX3CL1P78423 MTCO1P5-201ENST00000433573 344 ntBASIC1.49□□□□□ -2.17
CX3CL1P78423 AC008834.1-201ENST00000511612 175 ntBASIC1.49□□□□□ -2.17
CX3CL1P78423 RNU6-191P-201ENST00000516295 94 ntBASIC1.49□□□□□ -2.17
CX3CL1P78423 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.49□□□□□ -2.17
CX3CL1P78423 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.49□□□□□ -2.17
CX3CL1P78423 MIR3945-201ENST00000581853 98 ntBASIC1.49□□□□□ -2.17
CX3CL1P78423 AC005972.2-201ENST00000604690 348 ntBASIC1.49□□□□□ -2.17
CX3CL1P78423 AC068647.2-201ENST00000637380 353 ntBASIC1.49□□□□□ -2.17
CX3CL1P78423 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.49□□□□□ -2.17
CX3CL1P78423 AC099654.10-201ENST00000640395 161 ntBASIC1.49□□□□□ -2.17
CX3CL1P78423 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CX3CL1P78423 Y_RNA.16-201ENST00000362421 102 ntBASIC1.48□□□□□ -2.17
CX3CL1P78423 Y_RNA.84-201ENST00000363011 104 ntBASIC1.48□□□□□ -2.17
CX3CL1P78423 Y_RNA.265-201ENST00000364677 108 ntBASIC1.48□□□□□ -2.17
CX3CL1P78423 RNU6-1080P-201ENST00000383982 107 ntBASIC1.48□□□□□ -2.17
CX3CL1P78423 RNU6-713P-201ENST00000384761 107 ntBASIC1.48□□□□□ -2.17
CX3CL1P78423 UBL5P3-201ENST00000475112 231 ntBASIC1.48□□□□□ -2.17
CX3CL1P78423 RN7SL429P-201ENST00000479090 223 ntBASIC1.48□□□□□ -2.17
CX3CL1P78423 RN7SL489P-201ENST00000486185 223 ntBASIC1.48□□□□□ -2.17
CX3CL1P78423 RN7SL327P-201ENST00000488659 223 ntBASIC1.48□□□□□ -2.17
CX3CL1P78423 AL358944.1-201ENST00000528537 144 ntBASIC1.48□□□□□ -2.17
CX3CL1P78423 AC011604.1-201ENST00000545978 196 ntBASIC1.48□□□□□ -2.17
CX3CL1P78423 AC024614.2-201ENST00000577584 372 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms