Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC010487.4-201ENST00000637027 61 ntBASIC0.76□□□□□ -2.29
CCNA1P78396 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.75□□□□□ -2.29
CCNA1P78396 SNORA27.1-201ENST00000362604 124 ntBASIC0.75□□□□□ -2.29
CCNA1P78396 Y_RNA.86-201ENST00000363020 111 ntBASIC0.75□□□□□ -2.29
CCNA1P78396 Y_RNA.364-201ENST00000365532 101 ntBASIC0.75□□□□□ -2.29
CCNA1P78396 RNU6-1215P-201ENST00000384441 102 ntBASIC0.75□□□□□ -2.29
CCNA1P78396 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.75□□□□□ -2.29
CCNA1P78396 AC104332.1-201ENST00000440471 797 ntBASIC0.75□□□□□ -2.29
CCNA1P78396 PCNPP5-201ENST00000452246 481 ntBASIC0.75□□□□□ -2.29
CCNA1P78396 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.75□□□□□ -2.29
CCNA1P78396 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.75□□□□□ -2.29
CCNA1P78396 AC022868.1-201ENST00000517767 391 ntBASIC0.75□□□□□ -2.29
CCNA1P78396 AC105029.1-201ENST00000520250 669 ntBASIC0.75□□□□□ -2.29
CCNA1P78396 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.75□□□□□ -2.29
CCNA1P78396 AC091178.2-201ENST00000584401 117 ntBASIC0.75□□□□□ -2.29
CCNA1P78396 AL512605.2-201ENST00000592972 256 ntBASIC0.75□□□□□ -2.29
CCNA1P78396 AC090517.2-201ENST00000614966 680 ntBASIC0.75□□□□□ -2.29
CCNA1P78396 AC104260.1-201ENST00000616660 539 ntBASIC0.75□□□□□ -2.29
CCNA1P78396 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
CCNA1P78396 RNY1P16-201ENST00000363063 111 ntBASIC0.74□□□□□ -2.29
CCNA1P78396 SNORA2.2-201ENST00000365473 135 ntBASIC0.74□□□□□ -2.29
CCNA1P78396 Y_RNA.363-201ENST00000365529 113 ntBASIC0.74□□□□□ -2.29
CCNA1P78396 Y_RNA.557-201ENST00000384680 107 ntBASIC0.74□□□□□ -2.29
CCNA1P78396 AC092423.1-201ENST00000430165 186 ntBASIC0.74□□□□□ -2.29
CCNA1P78396 RNU6-625P-201ENST00000459412 107 ntBASIC0.74□□□□□ -2.29
CCNA1P78396 RNU6-329P-201ENST00000459618 107 ntBASIC0.74□□□□□ -2.29
CCNA1P78396 RPL7P42-201ENST00000481005 679 ntBASIC0.74□□□□□ -2.29
CCNA1P78396 RNU7-12P-201ENST00000516030 62 ntBASIC0.74□□□□□ -2.29
CCNA1P78396 RNU6-341P-201ENST00000516973 96 ntBASIC0.74□□□□□ -2.29
CCNA1P78396 AP002004.2-201ENST00000531656 154 ntBASIC0.74□□□□□ -2.29
CCNA1P78396 AC018448.1-201ENST00000552843 316 ntBASIC0.74□□□□□ -2.29
CCNA1P78396 AC018638.8-201ENST00000588755 281 ntBASIC0.74□□□□□ -2.29
CCNA1P78396 AL117336.2-201ENST00000602435 335 ntBASIC0.74□□□□□ -2.29
CCNA1P78396 AC106800.4-201ENST00000614905 153 ntBASIC0.74□□□□□ -2.29
CCNA1P78396 RNU6-1145P-201ENST00000384246 107 ntBASIC0.73□□□□□ -2.29
CCNA1P78396 RNU6-110P-201ENST00000384508 104 ntBASIC0.73□□□□□ -2.29
CCNA1P78396 MTCYBP4-201ENST00000401524 249 ntBASIC0.73□□□□□ -2.29
CCNA1P78396 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.73□□□□□ -2.29
CCNA1P78396 AC074085.1-201ENST00000413598 418 ntBASIC0.73□□□□□ -2.29
CCNA1P78396 MTCYBP10-201ENST00000424905 650 ntBASIC0.73□□□□□ -2.29
CCNA1P78396 FABP5P4-201ENST00000437203 171 ntBASIC0.73□□□□□ -2.29
CCNA1P78396 AL137792.2-201ENST00000443484 235 ntBASIC0.73□□□□□ -2.29
CCNA1P78396 AC233266.1-201ENST00000454518 96 ntBASIC0.73□□□□□ -2.29
CCNA1P78396 AC022493.2-201ENST00000506122 481 ntBASIC0.73□□□□□ -2.29
CCNA1P78396 RNU6-1278P-201ENST00000516130 107 ntBASIC0.73□□□□□ -2.29
CCNA1P78396 MIR4711-201ENST00000578274 70 ntBASIC0.73□□□□□ -2.29
CCNA1P78396 AC009229.3-201ENST00000608056 282 ntBASIC0.73□□□□□ -2.29
CCNA1P78396 AC242852.1-201ENST00000612151 96 ntBASIC0.73□□□□□ -2.29
CCNA1P78396 AC093783.1-201ENST00000612976 329 ntBASIC0.73□□□□□ -2.29
CCNA1P78396 AC244015.1-201ENST00000622301 99 ntBASIC0.73□□□□□ -2.29
CCNA1P78396 U6.115-201ENST00000636045 103 ntBASIC0.73□□□□□ -2.29
CCNA1P78396 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CCNA1P78396 CASC19-280ENST00000642102 1351 ntBASIC0.72□□□□□ -2.29
CCNA1P78396 AL589743.1-201ENST00000551932 2712 ntBASIC0.72□□□□□ -2.29
CCNA1P78396 RNU6-454P-201ENST00000364292 107 ntBASIC0.72□□□□□ -2.29
CCNA1P78396 Y_RNA.358-201ENST00000365491 99 ntBASIC0.72□□□□□ -2.29
CCNA1P78396 RNU6-601P-201ENST00000384540 107 ntBASIC0.72□□□□□ -2.29
CCNA1P78396 SNORD116-4-201ENST00000384733 96 ntBASIC0.72□□□□□ -2.29
CCNA1P78396 MIR548K-201ENST00000408406 116 ntBASIC0.72□□□□□ -2.29
CCNA1P78396 RNU6-1050P-201ENST00000410388 107 ntBASIC0.72□□□□□ -2.29
CCNA1P78396 MTND3P10-201ENST00000450967 341 ntBASIC0.72□□□□□ -2.29
CCNA1P78396 RNU7-90P-201ENST00000459216 62 ntBASIC0.72□□□□□ -2.29
CCNA1P78396 SNORA40.9-201ENST00000515895 93 ntBASIC0.72□□□□□ -2.29
CCNA1P78396 RNA5SP255-201ENST00000516370 107 ntBASIC0.72□□□□□ -2.29
CCNA1P78396 RNU6-63P-201ENST00000516690 95 ntBASIC0.72□□□□□ -2.29
CCNA1P78396 RNU6-1116P-201ENST00000517269 99 ntBASIC0.72□□□□□ -2.29
CCNA1P78396 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
CCNA1P78396 MIRLET7C-201ENST00000362160 84 ntBASIC0.71□□□□□ -2.3
CCNA1P78396 RNU6-117P-201ENST00000365415 107 ntBASIC0.71□□□□□ -2.3
CCNA1P78396 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
CCNA1P78396 RNU6-318P-201ENST00000384283 103 ntBASIC0.71□□□□□ -2.3
CCNA1P78396 Y_RNA.498-201ENST00000384460 102 ntBASIC0.71□□□□□ -2.3
CCNA1P78396 MIR562-201ENST00000384894 95 ntBASIC0.71□□□□□ -2.3
CCNA1P78396 MIR526A1-201ENST00000384897 85 ntBASIC0.71□□□□□ -2.3
CCNA1P78396 MIR873-201ENST00000401120 77 ntBASIC0.71□□□□□ -2.3
CCNA1P78396 MTND5P15-201ENST00000434246 349 ntBASIC0.71□□□□□ -2.3
CCNA1P78396 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.71□□□□□ -2.3
CCNA1P78396 AC074133.1-201ENST00000515696 183 ntBASIC0.71□□□□□ -2.3
CCNA1P78396 SNORD111.1-201ENST00000516421 86 ntBASIC0.71□□□□□ -2.3
CCNA1P78396 RNU7-28P-201ENST00000516759 62 ntBASIC0.71□□□□□ -2.3
CCNA1P78396 Y_RNA.708-201ENST00000516950 96 ntBASIC0.71□□□□□ -2.3
CCNA1P78396 RNU6-1096P-201ENST00000517089 102 ntBASIC0.71□□□□□ -2.3
CCNA1P78396 MIR3684-201ENST00000579779 74 ntBASIC0.71□□□□□ -2.3
CCNA1P78396 AC104465.1-201ENST00000611365 139 ntBASIC0.71□□□□□ -2.3
CCNA1P78396 MIR1244-1-201ENST00000612829 85 ntBASIC0.71□□□□□ -2.3
CCNA1P78396 AC127459.3-201ENST00000624328 466 ntBASIC0.71□□□□□ -2.3
CCNA1P78396 MIR1244-3-201ENST00000635744 85 ntBASIC0.71□□□□□ -2.3
CCNA1P78396 MIR1244-2-201ENST00000636449 85 ntBASIC0.71□□□□□ -2.3
CCNA1P78396 MIR3674-201ENST00000636576 68 ntBASIC0.71□□□□□ -2.3
CCNA1P78396 MIR1244-4-202ENST00000636813 85 ntBASIC0.71□□□□□ -2.3
CCNA1P78396 RNU6-593P-201ENST00000364716 112 ntBASIC0.7□□□□□ -2.3
CCNA1P78396 RNU6-136P-201ENST00000384663 107 ntBASIC0.7□□□□□ -2.3
CCNA1P78396 MIR625-201ENST00000385047 85 ntBASIC0.7□□□□□ -2.3
CCNA1P78396 RNA5SP482-201ENST00000391269 118 ntBASIC0.7□□□□□ -2.3
CCNA1P78396 MIR1277-201ENST00000408536 78 ntBASIC0.7□□□□□ -2.3
CCNA1P78396 RNA5SP193-201ENST00000410353 107 ntBASIC0.7□□□□□ -2.3
CCNA1P78396 RNU5A-5P-201ENST00000411054 116 ntBASIC0.7□□□□□ -2.3
CCNA1P78396 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.7□□□□□ -2.3
CCNA1P78396 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.7□□□□□ -2.3
CCNA1P78396 AC092628.1-201ENST00000436250 252 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 767.1 ms