Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HERVK_113P62684 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HERVK_113P62684 RNU6-312P-201ENST00000364629 107 ntBASIC2.75□□□□□ -1.97
HERVK_113P62684 Y_RNA.332-201ENST00000365271 113 ntBASIC2.75□□□□□ -1.97
HERVK_113P62684 SNORD116-18-201ENST00000383961 92 ntBASIC2.75□□□□□ -1.97
HERVK_113P62684 RNU2-48P-201ENST00000410694 191 ntBASIC2.75□□□□□ -1.97
HERVK_113P62684 RNU6-383P-201ENST00000410864 94 ntBASIC2.75□□□□□ -1.97
HERVK_113P62684 RPS12P2-201ENST00000439728 269 ntBASIC2.75□□□□□ -1.97
HERVK_113P62684 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.75□□□□□ -1.97
HERVK_113P62684 snoU13.23-201ENST00000458863 104 ntBASIC2.75□□□□□ -1.97
HERVK_113P62684 MIR4744-201ENST00000581563 82 ntBASIC2.75□□□□□ -1.97
HERVK_113P62684 AC005972.2-201ENST00000604690 348 ntBASIC2.75□□□□□ -1.97
HERVK_113P62684 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.75□□□□□ -1.97
HERVK_113P62684 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HERVK_113P62684 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
HERVK_113P62684 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HERVK_113P62684 Y_RNA.75-201ENST00000362927 97 ntBASIC2.74□□□□□ -1.97
HERVK_113P62684 Y_RNA.272-201ENST00000364696 102 ntBASIC2.74□□□□□ -1.97
HERVK_113P62684 RNU1-91P-201ENST00000364746 163 ntBASIC2.74□□□□□ -1.97
HERVK_113P62684 RNU6-144P-201ENST00000383951 107 ntBASIC2.74□□□□□ -1.97
HERVK_113P62684 Y_RNA.441-201ENST00000384123 112 ntBASIC2.74□□□□□ -1.97
HERVK_113P62684 MIR526A2-201ENST00000390198 65 ntBASIC2.74□□□□□ -1.97
HERVK_113P62684 RNA5SP511-201ENST00000410487 115 ntBASIC2.74□□□□□ -1.97
HERVK_113P62684 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.74□□□□□ -1.97
HERVK_113P62684 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.74□□□□□ -1.97
HERVK_113P62684 AL392103.1-201ENST00000447000 198 ntBASIC2.74□□□□□ -1.97
HERVK_113P62684 RPL23AP54-201ENST00000495129 419 ntBASIC2.74□□□□□ -1.97
HERVK_113P62684 RNU6-453P-201ENST00000516819 85 ntBASIC2.74□□□□□ -1.97
HERVK_113P62684 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.74□□□□□ -1.97
HERVK_113P62684 AC006435.5-201ENST00000624486 112 ntBASIC2.74□□□□□ -1.97
HERVK_113P62684 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.74□□□□□ -1.97
HERVK_113P62684 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.73□□□□□ -1.97
HERVK_113P62684 Y_RNA.23-201ENST00000362496 106 ntBASIC2.73□□□□□ -1.97
HERVK_113P62684 RNU6-103P-201ENST00000363686 107 ntBASIC2.73□□□□□ -1.97
HERVK_113P62684 RNU6-275P-201ENST00000364910 107 ntBASIC2.73□□□□□ -1.97
HERVK_113P62684 SNORA25B-201ENST00000365507 128 ntBASIC2.73□□□□□ -1.97
HERVK_113P62684 MIR764-201ENST00000390811 85 ntBASIC2.73□□□□□ -1.97
HERVK_113P62684 AC010154.1-201ENST00000425857 269 ntBASIC2.73□□□□□ -1.97
HERVK_113P62684 HMGN2P34-201ENST00000437647 269 ntBASIC2.73□□□□□ -1.97
HERVK_113P62684 AC018868.1-201ENST00000491307 315 ntBASIC2.73□□□□□ -1.97
HERVK_113P62684 SCARNA8-201ENST00000515924 131 ntBASIC2.73□□□□□ -1.97
HERVK_113P62684 RNU7-200P-201ENST00000516105 62 ntBASIC2.73□□□□□ -1.97
HERVK_113P62684 MIR4438-201ENST00000585271 93 ntBASIC2.73□□□□□ -1.97
HERVK_113P62684 AP003357.1-201ENST00000604497 148 ntBASIC2.73□□□□□ -1.97
HERVK_113P62684 AC108706.1-201ENST00000611053 297 ntBASIC2.73□□□□□ -1.97
HERVK_113P62684 CENPCP1-201ENST00000533085 2578 ntBASIC2.73□□□□□ -1.97
HERVK_113P62684 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
HERVK_113P62684 AC245060.5-201ENST00000610778 3293 ntBASIC2.73□□□□□ -1.97
HERVK_113P62684 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
HERVK_113P62684 RNU6-1130P-201ENST00000365434 107 ntBASIC2.72□□□□□ -1.97
HERVK_113P62684 RNU1-109P-201ENST00000383960 147 ntBASIC2.72□□□□□ -1.97
HERVK_113P62684 RNU6-1323P-201ENST00000384025 107 ntBASIC2.72□□□□□ -1.97
HERVK_113P62684 MT-TT-201ENST00000387460 66 ntBASIC2.72□□□□□ -1.97
HERVK_113P62684 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
HERVK_113P62684 RNU6-578P-201ENST00000390980 103 ntBASIC2.72□□□□□ -1.97
HERVK_113P62684 HMGN2P3-201ENST00000433603 273 ntBASIC2.72□□□□□ -1.97
HERVK_113P62684 CR769767.1-201ENST00000436337 346 ntBASIC2.72□□□□□ -1.97
HERVK_113P62684 HMGN2P5-201ENST00000436882 273 ntBASIC2.72□□□□□ -1.97
HERVK_113P62684 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.72□□□□□ -1.97
HERVK_113P62684 RNU7-116P-201ENST00000516940 62 ntBASIC2.72□□□□□ -1.97
HERVK_113P62684 RNU6-856P-201ENST00000516959 98 ntBASIC2.72□□□□□ -1.97
HERVK_113P62684 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.72□□□□□ -1.97
HERVK_113P62684 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.72□□□□□ -1.97
HERVK_113P62684 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.71□□□□□ -1.97
HERVK_113P62684 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HERVK_113P62684 SNORD114-1-201ENST00000362705 72 ntBASIC2.71□□□□□ -1.98
HERVK_113P62684 Y_RNA.229-201ENST00000364347 113 ntBASIC2.71□□□□□ -1.98
HERVK_113P62684 RNU6-376P-201ENST00000384731 106 ntBASIC2.71□□□□□ -1.98
HERVK_113P62684 MIR616-201ENST00000385293 97 ntBASIC2.71□□□□□ -1.98
HERVK_113P62684 AC060773.1-201ENST00000421698 310 ntBASIC2.71□□□□□ -1.98
HERVK_113P62684 AC009238.1-201ENST00000442165 424 ntBASIC2.71□□□□□ -1.98
HERVK_113P62684 AC009237.6-201ENST00000446969 424 ntBASIC2.71□□□□□ -1.98
HERVK_113P62684 RPL36AP21-201ENST00000490372 323 ntBASIC2.71□□□□□ -1.98
HERVK_113P62684 RNU7-172P-201ENST00000517125 64 ntBASIC2.71□□□□□ -1.98
HERVK_113P62684 AC127455.1-201ENST00000565496 145 ntBASIC2.71□□□□□ -1.98
HERVK_113P62684 AL449363.1-201ENST00000617815 186 ntBASIC2.71□□□□□ -1.98
HERVK_113P62684 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.71□□□□□ -1.98
HERVK_113P62684 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HERVK_113P62684 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HERVK_113P62684 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
HERVK_113P62684 MIR340-201ENST00000362125 95 ntBASIC2.7□□□□□ -1.98
HERVK_113P62684 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.7□□□□□ -1.98
HERVK_113P62684 RNU6-449P-201ENST00000383914 107 ntBASIC2.7□□□□□ -1.98
HERVK_113P62684 SNORA19-201ENST00000384737 128 ntBASIC2.7□□□□□ -1.98
HERVK_113P62684 EBAG9P1-201ENST00000418955 543 ntBASIC2.7□□□□□ -1.98
HERVK_113P62684 AL591806.2-201ENST00000433122 173 ntBASIC2.7□□□□□ -1.98
HERVK_113P62684 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.7□□□□□ -1.98
HERVK_113P62684 AC097462.1-201ENST00000514125 324 ntBASIC2.7□□□□□ -1.98
HERVK_113P62684 RNU6-406P-201ENST00000516470 107 ntBASIC2.7□□□□□ -1.98
HERVK_113P62684 RNA5SP402-201ENST00000517148 110 ntBASIC2.7□□□□□ -1.98
HERVK_113P62684 AC109810.1-201ENST00000534066 224 ntBASIC2.7□□□□□ -1.98
HERVK_113P62684 AC015712.3-201ENST00000559380 164 ntBASIC2.7□□□□□ -1.98
HERVK_113P62684 AC015720.1-201ENST00000565251 277 ntBASIC2.7□□□□□ -1.98
HERVK_113P62684 DEFB122-202ENST00000569013 197 ntBASIC2.7□□□□□ -1.98
HERVK_113P62684 MIR3910-1-201ENST00000580936 111 ntBASIC2.7□□□□□ -1.98
HERVK_113P62684 MIR6873-201ENST00000622788 63 ntBASIC2.7□□□□□ -1.98
HERVK_113P62684 MTND1P7-201ENST00000632801 297 ntBASIC2.7□□□□□ -1.98
HERVK_113P62684 U2.22-201ENST00000636441 106 ntBASIC2.7□□□□□ -1.98
HERVK_113P62684 AL157777.2-201ENST00000258070 137 ntBASIC2.69□□□□□ -1.98
HERVK_113P62684 RNU1-22P-201ENST00000363334 158 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms