| KRTAP12-3 | P60328 | RNU6-417P-201 | ENST00000384712 | 107 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | MIR128-1-201 | ENST00000384921 | 82 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | MIR597-201 | ENST00000384968 | 97 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | MIR221-201 | ENST00000385135 | 110 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | TRAJ49-201 | ENST00000390488 | 56 nt | APPRIS P1 BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | SNORA12.1-201 | ENST00000390873 | 148 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | SNORA48.1-201 | ENST00000390879 | 135 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | RNA5SP467-201 | ENST00000391274 | 118 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | MTCO2P33-201 | ENST00000402100 | 465 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | RNU4ATAC16P-201 | ENST00000408512 | 126 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | RN7SKP101-201 | ENST00000411376 | 320 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AC009310.1-201 | ENST00000414414 | 451 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | COTL1P1-201 | ENST00000422309 | 375 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AC010154.1-201 | ENST00000425857 | 269 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AC245047.4-201 | ENST00000433189 | 144 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AC018634.1-201 | ENST00000437554 | 401 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | HSPE1P21-201 | ENST00000438283 | 308 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | MTND2P29-201 | ENST00000438595 | 412 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AL021397.1-201 | ENST00000451806 | 248 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AL138752.1-201 | ENST00000452964 | 351 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | RNU6-717P-201 | ENST00000459076 | 104 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AC107393.1-201 | ENST00000512403 | 346 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AC010210.1-203 | ENST00000513905 | 260 nt | TSL 3 BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | RNU6-1278P-201 | ENST00000516130 | 107 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | RNU6-1146P-201 | ENST00000516282 | 102 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | RNY3P16-201 | ENST00000516338 | 101 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | RNU7-116P-201 | ENST00000516940 | 62 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | LARP7P3-201 | ENST00000579888 | 337 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | MIR5688-201 | ENST00000580619 | 83 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AC073413.2-201 | ENST00000604332 | 360 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AL161756.2-201 | ENST00000604597 | 246 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AC005972.2-201 | ENST00000604690 | 348 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AC072026.1-201 | ENST00000605023 | 201 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | MIR92B-201 | ENST00000607575 | 96 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AC091965.1-202 | ENST00000607662 | 397 nt | TSL 3 BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | CTSLP2-204 | ENST00000629029 | 392 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AC068647.2-201 | ENST00000637380 | 353 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | VPS54-202 | ENST00000354504 | 3594 nt | TSL 1 (best) BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | CHORDC1-205 | ENST00000529726 | 4805 nt | TSL 2 BASIC | 0.81 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AC011124.2-201 | ENST00000518739 | 3222 nt | TSL 1 (best) BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | ZNF451-208 | ENST00000491832 | 3632 nt | APPRIS ALT2 TSL 1 (best) BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | TTK-202 | ENST00000369798 | 3010 nt | APPRIS P3 TSL 1 (best) BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | CFH-202 | ENST00000367429 | 4127 nt | APPRIS P1 TSL 1 (best) BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | RNU6-862P-201 | ENST00000362804 | 105 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | RNU6-1020P-201 | ENST00000363684 | 107 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | SNORA38-201 | ENST00000363946 | 132 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | SNORA63D-201 | ENST00000364359 | 132 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | RNU4-10P-201 | ENST00000364383 | 140 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | Y_RNA.233-201 | ENST00000364407 | 101 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | RNU6-923P-201 | ENST00000364753 | 107 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | RNA5SP138-201 | ENST00000365098 | 114 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | RNU6-144P-201 | ENST00000383951 | 107 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | RNU6-209P-201 | ENST00000384118 | 107 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | RNU4-52P-201 | ENST00000384209 | 138 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | RNU6-886P-201 | ENST00000384319 | 105 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | Y_RNA.572-201 | ENST00000384757 | 98 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | MIR626-201 | ENST00000385032 | 94 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | TRAJ50-201 | ENST00000390487 | 60 nt | APPRIS P1 BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | SNORA40.19-201 | ENST00000390846 | 128 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | RNU6-493P-201 | ENST00000391321 | 108 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | SNORA36B-201 | ENST00000410438 | 131 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | RNA5SP450-201 | ENST00000411206 | 102 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | COX6CP10-201 | ENST00000416832 | 224 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AL592431.2-201 | ENST00000422198 | 171 nt | TSL 3 BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | PIGPP3-201 | ENST00000425307 | 415 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AL606517.2-201 | ENST00000442855 | 241 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AL109933.2-201 | ENST00000452651 | 260 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AC091021.1-201 | ENST00000468051 | 388 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | CPHL1P-203 | ENST00000471823 | 523 nt | TSL 5 BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AC117454.1-201 | ENST00000491120 | 168 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AC092666.1-201 | ENST00000492054 | 573 nt | TSL 4 BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AC055733.2-201 | ENST00000504737 | 340 nt | TSL 2 BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AC097716.1-201 | ENST00000509136 | 180 nt | TSL 2 BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | SCARNA8-201 | ENST00000515924 | 131 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | RNA5SP82-201 | ENST00000516707 | 92 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | RNU7-193P-201 | ENST00000516723 | 65 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | RNA5SP364-201 | ENST00000516938 | 78 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | RNU6-182P-201 | ENST00000516970 | 105 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | RNU6-1212P-201 | ENST00000517023 | 104 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | RNU6-1096P-201 | ENST00000517089 | 102 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AC022559.1-201 | ENST00000520905 | 205 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AP002392.1-201 | ENST00000537692 | 208 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | DISC1FP1-204 | ENST00000563681 | 466 nt | TSL 3 BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | SUB1P4-201 | ENST00000566062 | 339 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | MIR3126-201 | ENST00000577443 | 74 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | SNORD53-201 | ENST00000579969 | 78 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | MIR5694-201 | ENST00000581190 | 76 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | hsa-mir-548d-2.1-201 | ENST00000582790 | 97 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | LINC01900-203 | ENST00000585185 | 393 nt | TSL 3 BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AC022217.4-201 | ENST00000604389 | 163 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AL391903.3-201 | ENST00000612158 | 163 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AL359075.3-201 | ENST00000613288 | 217 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | MIR6895-201 | ENST00000613497 | 78 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | ST7-OT4_1.1-201 | ENST00000615322 | 200 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | Hammerhead_HH9.1-201 | ENST00000616606 | 77 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | MIR6079-201 | ENST00000635807 | 62 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | U6.106-201 | ENST00000636360 | 105 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | OSBPL1A-217 | ENST00000638614 | 84 nt | TSL 5 BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | AC018630.2-201 | ENST00000534866 | 2403 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| KRTAP12-3 | P60328 | HIF1A-201 | ENST00000323441 | 3555 nt | TSL 1 (best) BASIC | 0.8 | □□□□□ -2.28 | | |