Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.34□□□□□ -2.03
CLRN1P58418 AC107083.1-201ENST00000439643 279 ntBASIC2.34□□□□□ -2.03
CLRN1P58418 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.34□□□□□ -2.03
CLRN1P58418 AL109933.2-201ENST00000452651 260 ntBASIC2.34□□□□□ -2.03
CLRN1P58418 AC233266.1-201ENST00000454518 96 ntBASIC2.34□□□□□ -2.03
CLRN1P58418 AL049873.1-201ENST00000480540 376 ntBASIC2.34□□□□□ -2.03
CLRN1P58418 RNA5SP76-201ENST00000516277 87 ntBASIC2.34□□□□□ -2.03
CLRN1P58418 RNU6-406P-201ENST00000516470 107 ntBASIC2.34□□□□□ -2.03
CLRN1P58418 RPPH1-2P-201ENST00000516688 293 ntBASIC2.34□□□□□ -2.03
CLRN1P58418 RNU6-789P-201ENST00000517105 102 ntBASIC2.34□□□□□ -2.03
CLRN1P58418 AC079600.2-201ENST00000550076 130 ntBASIC2.34□□□□□ -2.03
CLRN1P58418 RPL23AP91-201ENST00000569211 455 ntBASIC2.34□□□□□ -2.03
CLRN1P58418 AL049861.1-201ENST00000603130 150 ntBASIC2.34□□□□□ -2.03
CLRN1P58418 AL021707.8-201ENST00000609428 183 ntBASIC2.34□□□□□ -2.03
CLRN1P58418 AC242852.1-201ENST00000612151 96 ntBASIC2.34□□□□□ -2.03
CLRN1P58418 AC244015.1-201ENST00000622301 99 ntBASIC2.34□□□□□ -2.03
CLRN1P58418 AC006386.2-201ENST00000624491 75 ntBASIC2.34□□□□□ -2.03
CLRN1P58418 AC012005.1-201ENST00000624575 75 ntBASIC2.34□□□□□ -2.03
CLRN1P58418 MTND1P7-201ENST00000632801 297 ntBASIC2.34□□□□□ -2.03
CLRN1P58418 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CLRN1P58418 RNU6-859P-201ENST00000362728 107 ntBASIC2.33□□□□□ -2.04
CLRN1P58418 Y_RNA.111-201ENST00000363248 100 ntBASIC2.33□□□□□ -2.04
CLRN1P58418 RNY3P5-201ENST00000384127 102 ntBASIC2.33□□□□□ -2.04
CLRN1P58418 Y_RNA.621-201ENST00000411065 96 ntBASIC2.33□□□□□ -2.04
CLRN1P58418 HMGN2P35-201ENST00000412164 270 ntBASIC2.33□□□□□ -2.04
CLRN1P58418 CST2P1-201ENST00000425770 87 ntBASIC2.33□□□□□ -2.04
CLRN1P58418 AC063976.3-201ENST00000426849 329 ntBASIC2.33□□□□□ -2.04
CLRN1P58418 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.33□□□□□ -2.04
CLRN1P58418 AC099677.2-201ENST00000436385 175 ntBASIC2.33□□□□□ -2.04
CLRN1P58418 AC107027.2-201ENST00000512197 115 ntBASIC2.33□□□□□ -2.04
CLRN1P58418 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.33□□□□□ -2.04
CLRN1P58418 AC096725.1-201ENST00000514266 313 ntBASIC2.33□□□□□ -2.04
CLRN1P58418 RNU6-1291P-201ENST00000516591 104 ntBASIC2.33□□□□□ -2.04
CLRN1P58418 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.33□□□□□ -2.04
CLRN1P58418 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.33□□□□□ -2.04
CLRN1P58418 MIR3910-1-201ENST00000580936 111 ntBASIC2.33□□□□□ -2.04
CLRN1P58418 MIR2681-201ENST00000581814 105 ntBASIC2.33□□□□□ -2.04
CLRN1P58418 AL031274.2-201ENST00000599419 203 ntBASIC2.33□□□□□ -2.04
CLRN1P58418 MIR6079-201ENST00000635807 62 ntBASIC2.33□□□□□ -2.04
CLRN1P58418 RNU6-1209P-201ENST00000363655 107 ntBASIC2.32□□□□□ -2.04
CLRN1P58418 Y_RNA.796-201ENST00000364268 102 ntBASIC2.32□□□□□ -2.04
CLRN1P58418 Y_RNA.267-201ENST00000364679 109 ntBASIC2.32□□□□□ -2.04
CLRN1P58418 RNU6-818P-201ENST00000364837 108 ntBASIC2.32□□□□□ -2.04
CLRN1P58418 Y_RNA.799-201ENST00000364992 102 ntBASIC2.32□□□□□ -2.04
CLRN1P58418 RNU6-1080P-201ENST00000383982 107 ntBASIC2.32□□□□□ -2.04
CLRN1P58418 RNU11-5P-201ENST00000391216 129 ntBASIC2.32□□□□□ -2.04
CLRN1P58418 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.32□□□□□ -2.04
CLRN1P58418 AC018634.1-201ENST00000437554 401 ntBASIC2.32□□□□□ -2.04
CLRN1P58418 SNRPGP8-201ENST00000454064 226 ntBASIC2.32□□□□□ -2.04
CLRN1P58418 RNU7-121P-201ENST00000516604 62 ntBASIC2.32□□□□□ -2.04
CLRN1P58418 GTF3AP2-201ENST00000557014 266 ntBASIC2.32□□□□□ -2.04
CLRN1P58418 MIR7106-201ENST00000612419 65 ntBASIC2.32□□□□□ -2.04
CLRN1P58418 AC018630.2-201ENST00000534866 2403 ntBASIC2.32□□□□□ -2.04
CLRN1P58418 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.32□□□□□ -2.04
CLRN1P58418 ZNF271P-202ENST00000465539 1970 ntBASIC2.32□□□□□ -2.04
CLRN1P58418 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
CLRN1P58418 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLRN1P58418 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.31□□□□□ -2.04
CLRN1P58418 RNU1-58P-201ENST00000362413 163 ntBASIC2.31□□□□□ -2.04
CLRN1P58418 RNU6-151P-201ENST00000364158 107 ntBASIC2.31□□□□□ -2.04
CLRN1P58418 RNU6-643P-201ENST00000384018 107 ntBASIC2.31□□□□□ -2.04
CLRN1P58418 MIR515-2-201ENST00000384883 83 ntBASIC2.31□□□□□ -2.04
CLRN1P58418 MIR515-1-201ENST00000384884 83 ntBASIC2.31□□□□□ -2.04
CLRN1P58418 MIR29C-201ENST00000385231 88 ntBASIC2.31□□□□□ -2.04
CLRN1P58418 BX510359.4-201ENST00000423750 193 ntBASIC2.31□□□□□ -2.04
CLRN1P58418 SNORD109B-201ENST00000458961 67 ntBASIC2.31□□□□□ -2.04
CLRN1P58418 SNORD109A-201ENST00000459128 67 ntBASIC2.31□□□□□ -2.04
CLRN1P58418 AL163195.1-201ENST00000496941 348 ntBASIC2.31□□□□□ -2.04
CLRN1P58418 SNORD116-25-201ENST00000516517 92 ntBASIC2.31□□□□□ -2.04
CLRN1P58418 RNU6-341P-201ENST00000516973 96 ntBASIC2.31□□□□□ -2.04
CLRN1P58418 Y_RNA.778-201ENST00000620203 90 ntBASIC2.31□□□□□ -2.04
CLRN1P58418 AC022513.1-201ENST00000624512 117 ntBASIC2.31□□□□□ -2.04
CLRN1P58418 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CLRN1P58418 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CLRN1P58418 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CLRN1P58418 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.3□□□□□ -2.04
CLRN1P58418 AL157777.2-201ENST00000258070 137 ntBASIC2.3□□□□□ -2.04
CLRN1P58418 SNORD45.3-201ENST00000363836 72 ntBASIC2.3□□□□□ -2.04
CLRN1P58418 Y_RNA.400-201ENST00000383963 111 ntBASIC2.3□□□□□ -2.04
CLRN1P58418 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.3□□□□□ -2.04
CLRN1P58418 SNORD11-201ENST00000459124 84 ntBASIC2.3□□□□□ -2.04
CLRN1P58418 RPS26P45-201ENST00000471748 340 ntBASIC2.3□□□□□ -2.04
CLRN1P58418 TRBV12-1-201ENST00000479785 344 ntBASIC2.3□□□□□ -2.04
CLRN1P58418 AC024995.1-201ENST00000523014 93 ntBASIC2.3□□□□□ -2.04
CLRN1P58418 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.3□□□□□ -2.04
CLRN1P58418 MIR5092-201ENST00000583139 88 ntBASIC2.3□□□□□ -2.04
CLRN1P58418 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.3□□□□□ -2.04
CLRN1P58418 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CLRN1P58418 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
CLRN1P58418 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CLRN1P58418 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CLRN1P58418 Y_RNA.337-201ENST00000365312 102 ntBASIC2.29□□□□□ -2.04
CLRN1P58418 MIR613-201ENST00000385248 95 ntBASIC2.29□□□□□ -2.04
CLRN1P58418 RN7SKP132-201ENST00000516001 208 ntBASIC2.29□□□□□ -2.04
CLRN1P58418 RNU6-826P-201ENST00000516827 104 ntBASIC2.29□□□□□ -2.04
CLRN1P58418 RNA5SP137-201ENST00000516833 135 ntBASIC2.29□□□□□ -2.04
CLRN1P58418 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.29□□□□□ -2.04
CLRN1P58418 JPX_2.1-201ENST00000614161 69 ntBASIC2.29□□□□□ -2.04
CLRN1P58418 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.29□□□□□ -2.04
CLRN1P58418 uc_338.4-201ENST00000616635 176 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms