Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 SNORD116-11-201ENST00000383882 92 ntBASIC0.36□□□□□ -2.35
CLDN18P56856 RNU6-259P-201ENST00000383999 107 ntBASIC0.36□□□□□ -2.35
CLDN18P56856 MIR7-2-201ENST00000384970 110 ntBASIC0.36□□□□□ -2.35
CLDN18P56856 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
CLDN18P56856 ELOCP21-201ENST00000412558 336 ntBASIC0.36□□□□□ -2.35
CLDN18P56856 AC244098.3-201ENST00000424803 96 ntBASIC0.36□□□□□ -2.35
CLDN18P56856 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.36□□□□□ -2.35
CLDN18P56856 AC092989.1-201ENST00000481235 277 ntBASIC0.36□□□□□ -2.35
CLDN18P56856 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.36□□□□□ -2.35
CLDN18P56856 Y_RNA.704-201ENST00000516851 102 ntBASIC0.36□□□□□ -2.35
CLDN18P56856 RNU6-273P-201ENST00000516937 96 ntBASIC0.36□□□□□ -2.35
CLDN18P56856 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.36□□□□□ -2.35
CLDN18P56856 MIR4764-201ENST00000580680 88 ntBASIC0.36□□□□□ -2.35
CLDN18P56856 MIR6516-201ENST00000630554 81 ntBASIC0.36□□□□□ -2.35
CLDN18P56856 RNU6-1084P-201ENST00000362498 107 ntBASIC0.35□□□□□ -2.35
CLDN18P56856 SNORD18A-201ENST00000363753 72 ntBASIC0.35□□□□□ -2.35
CLDN18P56856 RNA5SP48-201ENST00000363969 126 ntBASIC0.35□□□□□ -2.35
CLDN18P56856 RNU6-879P-201ENST00000364328 108 ntBASIC0.35□□□□□ -2.35
CLDN18P56856 RNU6-117P-201ENST00000365415 107 ntBASIC0.35□□□□□ -2.35
CLDN18P56856 RNU6-483P-201ENST00000384088 108 ntBASIC0.35□□□□□ -2.35
CLDN18P56856 RNU6-1119P-201ENST00000384349 108 ntBASIC0.35□□□□□ -2.35
CLDN18P56856 SNORD116-8-201ENST00000384365 95 ntBASIC0.35□□□□□ -2.35
CLDN18P56856 MIR193B-201ENST00000384907 83 ntBASIC0.35□□□□□ -2.35
CLDN18P56856 MIR15B-201ENST00000385045 98 ntBASIC0.35□□□□□ -2.35
CLDN18P56856 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.35□□□□□ -2.35
CLDN18P56856 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.35□□□□□ -2.35
CLDN18P56856 MLLT10P1-201ENST00000418346 262 ntBASIC0.35□□□□□ -2.35
CLDN18P56856 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.35□□□□□ -2.35
CLDN18P56856 AC074133.1-201ENST00000515696 183 ntBASIC0.35□□□□□ -2.35
CLDN18P56856 RNU4-57P-201ENST00000515980 135 ntBASIC0.35□□□□□ -2.35
CLDN18P56856 AF235103.2-201ENST00000525753 346 ntBASIC0.35□□□□□ -2.35
CLDN18P56856 AC036111.3-201ENST00000526389 112 ntBASIC0.35□□□□□ -2.35
CLDN18P56856 AC018448.1-201ENST00000552843 316 ntBASIC0.35□□□□□ -2.35
CLDN18P56856 NBR2-204ENST00000587322 63 ntBASIC0.35□□□□□ -2.35
CLDN18P56856 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.35□□□□□ -2.35
CLDN18P56856 AC134026.1-201ENST00000623249 2239 ntBASIC0.34□□□□□ -2.35
CLDN18P56856 MIR1-1-201ENST00000362147 71 ntBASIC0.34□□□□□ -2.36
CLDN18P56856 Y_RNA.48-201ENST00000362710 103 ntBASIC0.34□□□□□ -2.36
CLDN18P56856 Y_RNA.135-201ENST00000363439 95 ntBASIC0.34□□□□□ -2.36
CLDN18P56856 SNORD113.3-201ENST00000364630 78 ntBASIC0.34□□□□□ -2.36
CLDN18P56856 VTRNA1-3-201ENST00000365645 89 ntBASIC0.34□□□□□ -2.36
CLDN18P56856 Y_RNA.414-201ENST00000384011 101 ntBASIC0.34□□□□□ -2.36
CLDN18P56856 MIR329-1-201ENST00000385028 80 ntBASIC0.34□□□□□ -2.36
CLDN18P56856 SNORD105-201ENST00000386910 85 ntBASIC0.34□□□□□ -2.36
CLDN18P56856 RNU6-332P-201ENST00000391193 108 ntBASIC0.34□□□□□ -2.36
CLDN18P56856 AL390729.2-201ENST00000416137 156 ntBASIC0.34□□□□□ -2.36
CLDN18P56856 SUMO1P2-201ENST00000452524 304 ntBASIC0.34□□□□□ -2.36
CLDN18P56856 ELOCP24-201ENST00000456370 334 ntBASIC0.34□□□□□ -2.36
CLDN18P56856 RNU1-54P-201ENST00000517181 120 ntBASIC0.34□□□□□ -2.36
CLDN18P56856 AP003716.2-201ENST00000528260 108 ntBASIC0.34□□□□□ -2.36
CLDN18P56856 AC005730.3-201ENST00000583067 366 ntBASIC0.34□□□□□ -2.36
CLDN18P56856 AL591926.4-201ENST00000616895 298 ntBASIC0.34□□□□□ -2.36
CLDN18P56856 AP000770.2-201ENST00000623694 100 ntBASIC0.34□□□□□ -2.36
CLDN18P56856 AC100810.6-201ENST00000638068 285 ntBASIC0.34□□□□□ -2.36
CLDN18P56856 SNORA2B-201ENST00000384583 137 ntBASIC0.33□□□□□ -2.36
CLDN18P56856 RNA5SP511-201ENST00000410487 115 ntBASIC0.33□□□□□ -2.36
CLDN18P56856 AL354751.2-201ENST00000415471 210 ntBASIC0.33□□□□□ -2.36
CLDN18P56856 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.33□□□□□ -2.36
CLDN18P56856 AC244023.1-201ENST00000426884 112 ntBASIC0.33□□□□□ -2.36
CLDN18P56856 MTCO2P12-201ENST00000427426 682 ntBASIC0.33□□□□□ -2.36
CLDN18P56856 AC005534.2-201ENST00000431047 433 ntBASIC0.33□□□□□ -2.36
CLDN18P56856 UBE2V1P7-201ENST00000446395 340 ntBASIC0.33□□□□□ -2.36
CLDN18P56856 RNU6-625P-201ENST00000459412 107 ntBASIC0.33□□□□□ -2.36
CLDN18P56856 RNU7-43P-201ENST00000516554 64 ntBASIC0.33□□□□□ -2.36
CLDN18P56856 AC125232.2-201ENST00000592457 143 ntBASIC0.33□□□□□ -2.36
CLDN18P56856 AC242498.1-201ENST00000604134 111 ntBASIC0.33□□□□□ -2.36
CLDN18P56856 AC243994.1-201ENST00000618627 109 ntBASIC0.33□□□□□ -2.36
CLDN18P56856 MIR3674-201ENST00000636576 68 ntBASIC0.33□□□□□ -2.36
CLDN18P56856 MIR3974-201ENST00000637126 96 ntBASIC0.33□□□□□ -2.36
CLDN18P56856 RNU6-596P-201ENST00000365395 98 ntBASIC0.32□□□□□ -2.36
CLDN18P56856 EIF1P2-201ENST00000428233 350 ntBASIC0.32□□□□□ -2.36
CLDN18P56856 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.32□□□□□ -2.36
CLDN18P56856 RN7SKP164-201ENST00000516138 266 ntBASIC0.32□□□□□ -2.36
CLDN18P56856 RN7SKP12-201ENST00000516275 143 ntBASIC0.32□□□□□ -2.36
CLDN18P56856 RNU11-2P-201ENST00000516898 142 ntBASIC0.32□□□□□ -2.36
CLDN18P56856 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.32□□□□□ -2.36
CLDN18P56856 AL357075.2-201ENST00000614906 189 ntBASIC0.32□□□□□ -2.36
CLDN18P56856 AC008133.2-201ENST00000624540 351 ntBASIC0.32□□□□□ -2.36
CLDN18P56856 RNU6-1145P-201ENST00000384246 107 ntBASIC0.31□□□□□ -2.36
CLDN18P56856 RNU6-700P-201ENST00000391043 107 ntBASIC0.31□□□□□ -2.36
CLDN18P56856 MIR190B-201ENST00000401119 79 ntBASIC0.31□□□□□ -2.36
CLDN18P56856 RNU6-1304P-201ENST00000411374 106 ntBASIC0.31□□□□□ -2.36
CLDN18P56856 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.31□□□□□ -2.36
CLDN18P56856 DLGAP5P1-201ENST00000430307 464 ntBASIC0.31□□□□□ -2.36
CLDN18P56856 RNU7-66P-201ENST00000459469 62 ntBASIC0.31□□□□□ -2.36
CLDN18P56856 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.31□□□□□ -2.36
CLDN18P56856 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.31□□□□□ -2.36
CLDN18P56856 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.31□□□□□ -2.36
CLDN18P56856 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.31□□□□□ -2.36
CLDN18P56856 MIR1273G-201ENST00000577677 100 ntBASIC0.31□□□□□ -2.36
CLDN18P56856 MIR6779-201ENST00000617283 64 ntBASIC0.31□□□□□ -2.36
CLDN18P56856 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CLDN18P56856 RNU6-1059P-201ENST00000363752 98 ntBASIC0.3□□□□□ -2.36
CLDN18P56856 Y_RNA.256-201ENST00000364594 104 ntBASIC0.3□□□□□ -2.36
CLDN18P56856 RNU6-780P-201ENST00000391030 104 ntBASIC0.3□□□□□ -2.36
CLDN18P56856 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.3□□□□□ -2.36
CLDN18P56856 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.3□□□□□ -2.36
CLDN18P56856 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
CLDN18P56856 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
CLDN18P56856 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms