Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC100821.1-201ENST00000523153 2479 ntBASIC2.12□□□□□ -2.07
SUMO3P55854 MIR21-201ENST00000362134 72 ntBASIC2.12□□□□□ -2.07
SUMO3P55854 Y_RNA.111-201ENST00000363248 100 ntBASIC2.12□□□□□ -2.07
SUMO3P55854 Y_RNA.122-201ENST00000363331 96 ntBASIC2.12□□□□□ -2.07
SUMO3P55854 SNORD27-201ENST00000363981 72 ntBASIC2.12□□□□□ -2.07
SUMO3P55854 RNU6-1048P-201ENST00000364054 107 ntBASIC2.12□□□□□ -2.07
SUMO3P55854 RNU6-950P-201ENST00000384651 107 ntBASIC2.12□□□□□ -2.07
SUMO3P55854 RNA5SP109-201ENST00000391010 116 ntBASIC2.12□□□□□ -2.07
SUMO3P55854 MTCO2P33-201ENST00000402100 465 ntBASIC2.12□□□□□ -2.07
SUMO3P55854 Y_RNA.590-201ENST00000410140 107 ntBASIC2.12□□□□□ -2.07
SUMO3P55854 RNA5SP181-201ENST00000410246 98 ntBASIC2.12□□□□□ -2.07
SUMO3P55854 BTF3P11-201ENST00000426582 477 ntBASIC2.12□□□□□ -2.07
SUMO3P55854 AC245047.3-201ENST00000429428 127 ntBASIC2.12□□□□□ -2.07
SUMO3P55854 AL606517.2-201ENST00000442855 241 ntBASIC2.12□□□□□ -2.07
SUMO3P55854 SNORD2.1-201ENST00000458762 69 ntBASIC2.12□□□□□ -2.07
SUMO3P55854 U8.19-201ENST00000459095 133 ntBASIC2.12□□□□□ -2.07
SUMO3P55854 AC024405.2-202ENST00000532731 184 ntBASIC2.12□□□□□ -2.07
SUMO3P55854 AC110588.1-201ENST00000559699 137 ntBASIC2.12□□□□□ -2.07
SUMO3P55854 MIR4643-201ENST00000577473 78 ntBASIC2.12□□□□□ -2.07
SUMO3P55854 MIR5692C2-201ENST00000577959 77 ntBASIC2.12□□□□□ -2.07
SUMO3P55854 AC013791.1-201ENST00000616619 62 ntBASIC2.12□□□□□ -2.07
SUMO3P55854 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
SUMO3P55854 AC134026.1-201ENST00000623249 2239 ntBASIC2.11□□□□□ -2.07
SUMO3P55854 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
SUMO3P55854 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
SUMO3P55854 Y_RNA.60-201ENST00000362831 98 ntBASIC2.11□□□□□ -2.07
SUMO3P55854 Y_RNA.267-201ENST00000364679 109 ntBASIC2.11□□□□□ -2.07
SUMO3P55854 RNU6-144P-201ENST00000383951 107 ntBASIC2.11□□□□□ -2.07
SUMO3P55854 RNU6-211P-201ENST00000384047 107 ntBASIC2.11□□□□□ -2.07
SUMO3P55854 Y_RNA.539-201ENST00000384635 107 ntBASIC2.11□□□□□ -2.07
SUMO3P55854 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.11□□□□□ -2.07
SUMO3P55854 RNA5SP57-201ENST00000459463 123 ntBASIC2.11□□□□□ -2.07
SUMO3P55854 AP002004.2-201ENST00000531656 154 ntBASIC2.11□□□□□ -2.07
SUMO3P55854 AC011604.1-201ENST00000545978 196 ntBASIC2.11□□□□□ -2.07
SUMO3P55854 AC127455.1-201ENST00000565496 145 ntBASIC2.11□□□□□ -2.07
SUMO3P55854 MIR4287-201ENST00000579398 78 ntBASIC2.11□□□□□ -2.07
SUMO3P55854 MIR5694-201ENST00000581190 76 ntBASIC2.11□□□□□ -2.07
SUMO3P55854 AL008718.3-201ENST00000610217 321 ntBASIC2.11□□□□□ -2.07
SUMO3P55854 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.11□□□□□ -2.07
SUMO3P55854 MIR6766-201ENST00000622641 72 ntBASIC2.11□□□□□ -2.07
SUMO3P55854 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SUMO3P55854 Y_RNA.476-201ENST00000384347 108 ntBASIC2.1□□□□□ -2.07
SUMO3P55854 MIR17-201ENST00000385012 84 ntBASIC2.1□□□□□ -2.07
SUMO3P55854 SNORA36B-201ENST00000410438 131 ntBASIC2.1□□□□□ -2.07
SUMO3P55854 RNU6-651P-201ENST00000411040 105 ntBASIC2.1□□□□□ -2.07
SUMO3P55854 AC244636.1-201ENST00000421152 228 ntBASIC2.1□□□□□ -2.07
SUMO3P55854 AC233266.1-201ENST00000454518 96 ntBASIC2.1□□□□□ -2.07
SUMO3P55854 RPL23AP63-201ENST00000498752 471 ntBASIC2.1□□□□□ -2.07
SUMO3P55854 Y_RNA.679-201ENST00000516416 91 ntBASIC2.1□□□□□ -2.07
SUMO3P55854 RNU6-1291P-201ENST00000516591 104 ntBASIC2.1□□□□□ -2.07
SUMO3P55854 RNA5SP437-201ENST00000517249 129 ntBASIC2.1□□□□□ -2.07
SUMO3P55854 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.1□□□□□ -2.07
SUMO3P55854 AC046143.2-201ENST00000609789 160 ntBASIC2.1□□□□□ -2.07
SUMO3P55854 AC242852.1-201ENST00000612151 96 ntBASIC2.1□□□□□ -2.07
SUMO3P55854 AC073349.3-201ENST00000617616 186 ntBASIC2.1□□□□□ -2.07
SUMO3P55854 MIR8054-201ENST00000620877 86 ntBASIC2.1□□□□□ -2.07
SUMO3P55854 AC244015.1-201ENST00000622301 99 ntBASIC2.1□□□□□ -2.07
SUMO3P55854 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SUMO3P55854 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.09□□□□□ -2.07
SUMO3P55854 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SUMO3P55854 AL596028.1-201ENST00000326971 197 ntBASIC2.09□□□□□ -2.07
SUMO3P55854 RNU6-440P-201ENST00000390882 105 ntBASIC2.09□□□□□ -2.07
SUMO3P55854 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.09□□□□□ -2.07
SUMO3P55854 RPL23AP54-201ENST00000495129 419 ntBASIC2.09□□□□□ -2.07
SUMO3P55854 SNORA31.17-201ENST00000516953 127 ntBASIC2.09□□□□□ -2.07
SUMO3P55854 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.09□□□□□ -2.07
SUMO3P55854 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.09□□□□□ -2.07
SUMO3P55854 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SUMO3P55854 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SUMO3P55854 RNU6-379P-201ENST00000363813 104 ntBASIC2.08□□□□□ -2.08
SUMO3P55854 RNU6-360P-201ENST00000390944 104 ntBASIC2.08□□□□□ -2.08
SUMO3P55854 RN7SKP200-201ENST00000410564 320 ntBASIC2.08□□□□□ -2.08
SUMO3P55854 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.08□□□□□ -2.08
SUMO3P55854 HSPE1P9-201ENST00000440046 311 ntBASIC2.08□□□□□ -2.08
SUMO3P55854 RPL23AP6-201ENST00000446637 472 ntBASIC2.08□□□□□ -2.08
SUMO3P55854 Y_RNA.638-201ENST00000459374 113 ntBASIC2.08□□□□□ -2.08
SUMO3P55854 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.08□□□□□ -2.08
SUMO3P55854 RNU7-28P-201ENST00000516759 62 ntBASIC2.08□□□□□ -2.08
SUMO3P55854 RNU2-56P-201ENST00000516826 190 ntBASIC2.08□□□□□ -2.08
SUMO3P55854 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.08□□□□□ -2.08
SUMO3P55854 MIR6852-201ENST00000621699 66 ntBASIC2.08□□□□□ -2.08
SUMO3P55854 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SUMO3P55854 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.08□□□□□ -2.08
SUMO3P55854 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SUMO3P55854 SNORA1B-201ENST00000362535 133 ntBASIC2.07□□□□□ -2.08
SUMO3P55854 Y_RNA.65-201ENST00000362846 100 ntBASIC2.07□□□□□ -2.08
SUMO3P55854 Y_RNA.76-201ENST00000362931 109 ntBASIC2.07□□□□□ -2.08
SUMO3P55854 RNU6-1205P-201ENST00000363625 106 ntBASIC2.07□□□□□ -2.08
SUMO3P55854 RNU6-674P-201ENST00000363831 107 ntBASIC2.07□□□□□ -2.08
SUMO3P55854 RNU6-338P-201ENST00000383888 105 ntBASIC2.07□□□□□ -2.08
SUMO3P55854 MIR23A-201ENST00000385245 73 ntBASIC2.07□□□□□ -2.08
SUMO3P55854 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.07□□□□□ -2.08
SUMO3P55854 AL049830.1-201ENST00000468034 425 ntBASIC2.07□□□□□ -2.08
SUMO3P55854 RPS27P21-201ENST00000486977 252 ntBASIC2.07□□□□□ -2.08
SUMO3P55854 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.07□□□□□ -2.08
SUMO3P55854 RNU4-71P-201ENST00000516258 113 ntBASIC2.07□□□□□ -2.08
SUMO3P55854 RNU6-111P-201ENST00000517179 105 ntBASIC2.07□□□□□ -2.08
SUMO3P55854 AC022254.1-201ENST00000567857 235 ntBASIC2.07□□□□□ -2.08
SUMO3P55854 MIR5688-201ENST00000580619 83 ntBASIC2.07□□□□□ -2.08
SUMO3P55854 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms